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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_900618215_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
DOCCGICG_23760 or DOCCGICG_06810 or DOCCGICG_12160 or DOCCGICG_06790 or DOCCGICG_06800 or DOCCGICG_23770 or DOCCGICG_12170 or DOCCGICG_12180 or DOCCGICG_04770
BiGG ID Name
DOCCGICG_23760 None
DOCCGICG_06810 None
DOCCGICG_12160 None
DOCCGICG_06790 None
DOCCGICG_06800 None
DOCCGICG_23770 None
DOCCGICG_12170 None
DOCCGICG_12180 None
DOCCGICG_04770 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 291 (26.85%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__GLNTAL, __LactoPanGEM__UMPK, __LactoPanGEM__3OAR60, __LactoPanGEM__UPPRT, __LactoPanGEM__3HAD100_1, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.