1. Home
  2. Models
  3. GCF_019211765_1
  4. Reactions
  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_019211765_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
PEHEKOEG_14580 or PEHEKOEG_19760 or PEHEKOEG_03070 or PEHEKOEG_21380 or PEHEKOEG_19770 or PEHEKOEG_14570 or PEHEKOEG_03060 or PEHEKOEG_14560 or PEHEKOEG_19750
BiGG ID Name
PEHEKOEG_19770 None
PEHEKOEG_14570 None
PEHEKOEG_03060 None
PEHEKOEG_14560 None
PEHEKOEG_19750 None
PEHEKOEG_14580 None
PEHEKOEG_19760 None
PEHEKOEG_03070 None
PEHEKOEG_21380 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 321 (27.23%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__14MPDACPTr, __LactoPanGEM__PGPAGT, __LactoPanGEM__CYSTRS, __LactoPanGEM__ADPT, __LactoPanGEM__CYTK2, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.