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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_018993625_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
BCNOHHKP_10260 or BCNOHHKP_10270 or BCNOHHKP_00230 or BCNOHHKP_34270 or BCNOHHKP_26960 or BCNOHHKP_26950 or BCNOHHKP_00220 or BCNOHHKP_10250 or BCNOHHKP_00210
BiGG ID Name
BCNOHHKP_00220 None
BCNOHHKP_10250 None
BCNOHHKP_00210 None
BCNOHHKP_10260 None
BCNOHHKP_10270 None
BCNOHHKP_00230 None
BCNOHHKP_34270 None
BCNOHHKP_26960 None
BCNOHHKP_26950 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 318 (26.88%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__FAS1_6_c, __LactoPanGEM__GTPCII2, __LactoPanGEM__ECOAH1, __LactoPanGEM__14MPDACPTr, __LactoPanGEM__AHSERL4, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.