1. Home
  2. Models
  3. GCF_014131735_1
  4. Reactions
  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_014131735_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
BNMKGLNK_15460 or BNMKGLNK_20830 or BNMKGLNK_28220 or BNMKGLNK_15470 or BNMKGLNK_28230 or BNMKGLNK_09270 or BNMKGLNK_20810 or BNMKGLNK_15480 or BNMKGLNK_20820
BiGG ID Name
BNMKGLNK_28220 None
BNMKGLNK_28230 None
BNMKGLNK_15480 None
BNMKGLNK_20810 None
BNMKGLNK_15460 None
BNMKGLNK_20820 None
BNMKGLNK_15470 None
BNMKGLNK_09270 None
BNMKGLNK_20830 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 318 (27.41%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__AIPDLTAS, __LactoPanGEM__EAR100x, __LactoPanGEM__COAGLTOX, __LactoPanGEM__DMATT, __LactoPanGEM__ADPRATr, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.