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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_013305265_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
FKKJOLLM_14040 or FKKJOLLM_13140 or FKKJOLLM_19410 or FKKJOLLM_00500 or FKKJOLLM_14060 or FKKJOLLM_19400 or FKKJOLLM_14050 or FKKJOLLM_19420 or FKKJOLLM_00510
BiGG ID Name
FKKJOLLM_14040 None
FKKJOLLM_13140 None
FKKJOLLM_19410 None
FKKJOLLM_00500 None
FKKJOLLM_14060 None
FKKJOLLM_19400 None
FKKJOLLM_14050 None
FKKJOLLM_19420 None
FKKJOLLM_00510 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 316 (27.17%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__COADSR, __LactoPanGEM__PEPGLCSS, __LactoPanGEM__DAGGT_LBR, __LactoPanGEM__IG3PS, __LactoPanGEM__DMATT, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.