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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_009762745_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
MADOJEAC_15830 or MADOJEAC_21210 or MADOJEAC_15850 or MADOJEAC_21200 or MADOJEAC_15840 or MADOJEAC_22720 or MADOJEAC_21220 or MADOJEAC_03090 or MADOJEAC_03080
BiGG ID Name
MADOJEAC_15830 None
MADOJEAC_21210 None
MADOJEAC_15850 None
MADOJEAC_21200 None
MADOJEAC_15840 None
MADOJEAC_22720 None
MADOJEAC_21220 None
MADOJEAC_03090 None
MADOJEAC_03080 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 315 (27.23%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__PGSA160, __LactoPanGEM__TMPPP_1, __LactoPanGEM__URED, __LactoPanGEM__ILETRS, __LactoPanGEM__PGPAGT, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.