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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_009679195_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
LBEEBGHH_06630 or LBEEBGHH_04430 or LBEEBGHH_06620 or LBEEBGHH_07200 or LBEEBGHH_06100 or LBEEBGHH_06120 or LBEEBGHH_07190 or LBEEBGHH_06110 or LBEEBGHH_06610
BiGG ID Name
LBEEBGHH_06620 None
LBEEBGHH_07200 None
LBEEBGHH_06100 None
LBEEBGHH_06120 None
LBEEBGHH_07190 None
LBEEBGHH_06110 None
LBEEBGHH_06610 None
LBEEBGHH_06630 None
LBEEBGHH_04430 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 286 (28.92%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__ALACDC, __LactoPanGEM__AGPAT180, __LactoPanGEM__EAR100x, __LactoPanGEM__GUAPRT, __LactoPanGEM__DTMPK, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.