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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_009679165_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
OKMBPOAO_06740 or OKMBPOAO_03530 or OKMBPOAO_07310 or OKMBPOAO_06210 or OKMBPOAO_06730 or OKMBPOAO_06200 or OKMBPOAO_06220 or OKMBPOAO_07300 or OKMBPOAO_06720
BiGG ID Name
OKMBPOAO_06730 None
OKMBPOAO_06200 None
OKMBPOAO_06220 None
OKMBPOAO_07300 None
OKMBPOAO_06720 None
OKMBPOAO_06740 None
OKMBPOAO_03530 None
OKMBPOAO_07310 None
OKMBPOAO_06210 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 286 (28.92%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__METAT, __LactoPanGEM__FAS1_6_c, __LactoPanGEM__PGSA161, __LactoPanGEM__FAS1_7_c, __LactoPanGEM__PGSA180, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.