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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_009295675_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
BHCAOGIP_13800 or BHCAOGIP_28390 or BHCAOGIP_16170 or BHCAOGIP_28380 or BHCAOGIP_13810 or BHCAOGIP_13820 or BHCAOGIP_16150 or BHCAOGIP_23520 or BHCAOGIP_16160
BiGG ID Name
BHCAOGIP_13800 None
BHCAOGIP_28390 None
BHCAOGIP_16170 None
BHCAOGIP_28380 None
BHCAOGIP_13810 None
BHCAOGIP_13820 None
BHCAOGIP_16150 None
BHCAOGIP_23520 None
BHCAOGIP_16160 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 315 (26.65%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__DASYN160, __LactoPanGEM__14MPDACPTr, __LactoPanGEM__DASYN180, __LactoPanGEM__UTPUH, __LactoPanGEM__MAN1PT, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.