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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_008016845_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
GIDCMMLE_10220 or GIDCMMLE_08830 or GIDCMMLE_10210 or GIDCMMLE_11140 or GIDCMMLE_10200 or GIDCMMLE_08820 or GIDCMMLE_08810 or GIDCMMLE_21370 or GIDCMMLE_21380
BiGG ID Name
GIDCMMLE_11140 None
GIDCMMLE_10200 None
GIDCMMLE_08820 None
GIDCMMLE_08810 None
GIDCMMLE_21370 None
GIDCMMLE_21380 None
GIDCMMLE_10220 None
GIDCMMLE_08830 None
GIDCMMLE_10210 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 316 (27.48%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__IG3PS, __LactoPanGEM__LYSTRS, __LactoPanGEM__AALACPTD, __LactoPanGEM__AIPEDPCTr, __LactoPanGEM__ASPTRS, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.