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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_007989145_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
PNOCIKHI_00900 or PNOCIKHI_00890 or PNOCIKHI_06480 or PNOCIKHI_29260 or PNOCIKHI_05710 or PNOCIKHI_05720 or PNOCIKHI_06470 or PNOCIKHI_00880 or PNOCIKHI_06460
BiGG ID Name
PNOCIKHI_05710 None
PNOCIKHI_05720 None
PNOCIKHI_06470 None
PNOCIKHI_00880 None
PNOCIKHI_06460 None
PNOCIKHI_00900 None
PNOCIKHI_00890 None
PNOCIKHI_06480 None
PNOCIKHI_29260 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 318 (27.41%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__DTMPK, __LactoPanGEM__DAGK161, __LactoPanGEM__ARGSS, __LactoPanGEM__3OAS80, __LactoPanGEM__DUTPDP, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.