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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_004354995_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
MPNNGCPO_26180 or MPNNGCPO_01550 or MPNNGCPO_01540 or MPNNGCPO_11630 or MPNNGCPO_26170 or MPNNGCPO_13410 or MPNNGCPO_11640 or MPNNGCPO_26160 or MPNNGCPO_11620
BiGG ID Name
MPNNGCPO_26160 None
MPNNGCPO_11620 None
MPNNGCPO_26180 None
MPNNGCPO_01550 None
MPNNGCPO_01540 None
MPNNGCPO_11630 None
MPNNGCPO_26170 None
MPNNGCPO_13410 None
MPNNGCPO_11640 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 315 (27.27%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__UAGPT3, __LactoPanGEM__G3PAT141, __LactoPanGEM__NAPRT, __LactoPanGEM__FOLD3, __LactoPanGEM__GALU, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.