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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_004101645_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
NJECPOIC_03110 or NJECPOIC_03100 or NJECPOIC_20700 or NJECPOIC_22500 or NJECPOIC_20710 or NJECPOIC_15460 or NJECPOIC_15450 or NJECPOIC_15470 or NJECPOIC_20720
BiGG ID Name
NJECPOIC_22500 None
NJECPOIC_03110 None
NJECPOIC_15470 None
NJECPOIC_03100 None
NJECPOIC_20710 None
NJECPOIC_15460 None
NJECPOIC_15450 None
NJECPOIC_20700 None
NJECPOIC_20720 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 322 (27.66%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__METACH, __LactoPanGEM__STCOATr, __LactoPanGEM__PLTASUDALAS, __LactoPanGEM__METAT, __LactoPanGEM__PGMT_B, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.