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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_004087995_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
KAMJMNHD_20180 or KAMJMNHD_14220 or KAMJMNHD_21270 or KAMJMNHD_14200 or KAMJMNHD_14210 or KAMJMNHD_02870 or KAMJMNHD_20190 or KAMJMNHD_20200 or KAMJMNHD_02880
BiGG ID Name
KAMJMNHD_20200 None
KAMJMNHD_02880 None
KAMJMNHD_02870 None
KAMJMNHD_21270 None
KAMJMNHD_14220 None
KAMJMNHD_14210 None
KAMJMNHD_20190 None
KAMJMNHD_14200 None
KAMJMNHD_20180 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 320 (27.33%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__PGSA141, __LactoPanGEM__4M3OHAT, __LactoPanGEM__METSRabc, __LactoPanGEM__UDCPDPS, __LactoPanGEM__CYTK1, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.