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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_003053165_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
JGMJPAMC_14790 or JGMJPAMC_30410 or JGMJPAMC_30430 or JGMJPAMC_07570 or JGMJPAMC_07580 or JGMJPAMC_18950 or JGMJPAMC_14810 or JGMJPAMC_14800 or JGMJPAMC_30420
BiGG ID Name
JGMJPAMC_14810 None
JGMJPAMC_14800 None
JGMJPAMC_30420 None
JGMJPAMC_14790 None
JGMJPAMC_30410 None
JGMJPAMC_30430 None
JGMJPAMC_07570 None
JGMJPAMC_07580 None
JGMJPAMC_18950 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 315 (27.09%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__3OAS100, __LactoPanGEM__IHEDPCTr, __LactoPanGEM__G3PAT141, __LactoPanGEM__ACOATA, __LactoPanGEM__CYTK1, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.