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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_002750695_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
GHKEDOHP_22210 or GHKEDOHP_22200 or GHKEDOHP_06420 or GHKEDOHP_01780 or GHKEDOHP_01300 or GHKEDOHP_06430 or GHKEDOHP_01310 or GHKEDOHP_22190 or GHKEDOHP_06410
BiGG ID Name
GHKEDOHP_06410 None
GHKEDOHP_22210 None
GHKEDOHP_22200 None
GHKEDOHP_06420 None
GHKEDOHP_01780 None
GHKEDOHP_01300 None
GHKEDOHP_06430 None
GHKEDOHP_01310 None
GHKEDOHP_22190 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 315 (27.34%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__ISOGL3P, __LactoPanGEM__PPADPP1_1, __LactoPanGEM__IG3PS, __LactoPanGEM__PPA2, __LactoPanGEM__HISTRS, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.