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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_002165725_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
OBAEOLCH_19220 or OBAEOLCH_27300 or OBAEOLCH_25730 or OBAEOLCH_19230 or OBAEOLCH_27290 or OBAEOLCH_24380 or OBAEOLCH_24370 or OBAEOLCH_19210 or OBAEOLCH_27310
BiGG ID Name
OBAEOLCH_24370 None
OBAEOLCH_19230 None
OBAEOLCH_27300 None
OBAEOLCH_27310 None
OBAEOLCH_24380 None
OBAEOLCH_25730 None
OBAEOLCH_19220 None
OBAEOLCH_19210 None
OBAEOLCH_27290 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 308 (27.30%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__14MHDACPTr, __LactoPanGEM__2OXOADOXm, __LactoPanGEM__14MPDACPTr, __LactoPanGEM__FBA, __LactoPanGEM__AIHEDLTAS24LGS, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.