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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
3HBZCT 3-hydroxybenzoyl-CoA thioesterase GAP
__Ecoli_panGEMs__ACOLIPAabctex Arabinose modified core oligosaccharide lipid A transport via ABC system (periplasm to extracellular) GAP
AGDC N-acetylglucosamine-6-phosphate deacetylase GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLK Allose kinase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
__Ecoli_panGEMs__ALPATE160pp Apolipoprotein N-acyltransferase (phosphatidylethanolamine, periplasm) GAP
__Ecoli_panGEMs__ALPATG160pp Apolipoprotein N-acyltransferase (phosphatidylglycerol, periplasm) GAP
ASNS1 asparagine synthase (glutamine-hydrolysing) GAP
ASPabcpp L-aspartate transport via ABC system (periplasm) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
CITL Citrate lyase GAP
CITt7pp Citrate transport via succinate antiport (periplasm) GAP
__Ecoli_panGEMs__CLIPAabctex Cold lipid A transport via ABC system (periplasm to extracellular) GAP
__Ecoli_panGEMs__COLIPAabctex Core oligosaccharide lipid A transport via ABC system (periplasm to extracellular) GAP
__Ecoli_panGEMs__COLIPAPabctex Core oligosaccharide lipid A diphosphate transport via ABC system (periplasm to extracellular) GAP
DDCAtexi Fatty acid (dodecanoate) transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
DHBD 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GAP
DHBS 2,3-dihydroxybenzoate adenylate synthase GAP
__Ecoli_panGEMs__DHBSZ3FEabcpp 23dhbsz3 Fe III transport via ABC system periplasm GAP
__Ecoli_panGEMs__DSBGGT DsbG:glutathione thiotransferase GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__ECA4COLIPAabctex Enterobacterial common antigen (x4) core oligosaccharide lipid A transport via ABC system (periplasm to extracellular) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__ENLIPAabctex Phosphoethanolamine lipid A transport via ABC system (periplasm to extracellular) GAP
ENTERES Enterochelin Esterase GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEENTERES Enterochelin Esterase (Fe containing) GAP
__Ecoli_panGEMs__FEENTERtonex Fe-enterobactin transport via ton system (extracellular) GAP
FEENTERtpp enterochelin transport (secretion) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSK Fructoselysine Kinase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
Ftpp F- efflux transport GAP
G6PDA glucosamine-6-phosphate deaminase GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GLUabcpp L-glutamate transport via ABC system (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
HDCAtexi Hexadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
HDCEAtexi Hexadecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
ICHORS isochorismate synthase GAP
ICHORT isochorismatase GAP
K2L4Aabctex KDO(2)-lipid IV A transport via ABC system (periplasm to extracellular) GAP
Kabcpp Potassium ABC transporter (periplasm) GAP
LIPAabctex lipid A transport via ABC system (periplasm to extracellular) GAP
__Ecoli_panGEMs__LIPAHT2ex Core oligosaccharide lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane) GAP
__Ecoli_panGEMs__LIPAHTex Lipid A:hexadecanoate transferase (n-C16:0) (extracellular membrane) GAP
__Ecoli_panGEMs__LIPOCT Lipoyl(octanoyl) transferase GAP
__Ecoli_panGEMs__LIPOS Lipoate synthase GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase GAP
__Ecoli_panGEMs__MCTP1App Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm) GAP
__Ecoli_panGEMs__MCTP2App Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm) GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
NADHPO NADH peroxidase GAP
NNATr nicotinate-nucleotide adenylyltransferase GAP
__Ecoli_panGEMs__O16A4COLIPAabctex O16 antigen (x4) core oligosaccharide lipid A transport via ABC system (periplasm to extracellular) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OCDCAtexi Octadecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
OCDCEAtexi Octadecenoate (n-C18:1) transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
OMMBLHXy 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NADPHl) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
PTRCORNt7pp putrescine/ornithine antiporter (periplasm) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
RZ5PP alpha-ribazole 5-phosphate phosphatase GAP
SERASr (L-seryl)adenylate synthase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
__Ecoli_panGEMs__TDSR2 Thiol:disulfide reductase (DsbG) GAP
TPRDCOAS triphosphoribosyl-dephospho-CoA synthase GAP
TTDCAtexi Tetradecanoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
TTDCEAtexi Tetradecenoate transport via facilitated irreversible diffusion (extracellular to periplasm) GAP
UDPGALM UDPgalactopyranose mutase GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP