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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_001888575_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
FIKHJNCP_24700 or FIKHJNCP_03030 or FIKHJNCP_07630 or FIKHJNCP_07640 or FIKHJNCP_03020 or FIKHJNCP_21600 or FIKHJNCP_24690 or FIKHJNCP_03040 or FIKHJNCP_24680
BiGG ID Name
FIKHJNCP_24690 None
FIKHJNCP_07630 None
FIKHJNCP_07640 None
FIKHJNCP_03040 None
FIKHJNCP_03030 None
FIKHJNCP_24700 None
FIKHJNCP_03020 None
FIKHJNCP_21600 None
FIKHJNCP_24680 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 316 (27.53%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__3OAR120, __LactoPanGEM__AMID2, __LactoPanGEM__TZLS, __LactoPanGEM__TYRTRS, __LactoPanGEM__U23GAAT, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.