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  5. __LactoPanGEM__METSRabc
__LactoPanGEM__METSRabc in GCF_001639545_1
  • L methionine R oxide transport via ABC system
  • h2o_c:0 + __LactoPanGEM__atp_c:0 → __LactoPanGEM__adp_c:0 + __LactoPanGEM__h_c:0 + __LactoPanGEM__metox__R_c:0 + __LactoPanGEM__pi_c:0
  • Bounds: (0.0, 1000.0)
  • Universal Reaction: __LactoPanGEM__METSRabc
Reaction Participants
Stoich. BiGG ID Name Reference x [side] Compartment
-1 h2o_c:0 water CHEBI:15377 - -
-1 __LactoPanGEM__atp_c:0 ATP - - -
1 __LactoPanGEM__adp_c:0 ADP - - -
1 __LactoPanGEM__h_c:0 H+ - - -
1 __LactoPanGEM__metox__R_c:0 L-methionine R-oxide - - -
1 __LactoPanGEM__pi_c:0 Phosphate - - -
Gene Reaction Rule
KKABLDDH_12610 or KKABLDDH_11700 or KKABLDDH_11690 or KKABLDDH_30370 or KKABLDDH_03710 or KKABLDDH_03720 or KKABLDDH_11680 or KKABLDDH_03730 or KKABLDDH_30360
BiGG ID Name
KKABLDDH_03730 None
KKABLDDH_30360 None
KKABLDDH_12610 None
KKABLDDH_11700 None
KKABLDDH_11690 None
KKABLDDH_30370 None
KKABLDDH_03710 None
KKABLDDH_03720 None
KKABLDDH_11680 None
MEMOTE Flags
This reaction was flagged in the following MEMOTE tests:

A total of 321 (27.46%) reactions are mass unbalanced with at least one of the metabolites not having a formula or the overall mass not equal to 0: __LactoPanGEM__ACOAD1f, __LactoPanGEM__ADPRATr, __LactoPanGEM__EAR120y, __LactoPanGEM__CNUNUH, __LactoPanGEM__AGPAT140, ...

This will exclude biomass, exchange and demand reactions as they are unbalanced by definition. It will also fail all reactions where at least one metabolite does not have a formula defined. In steady state, for each metabolite the sum of influx equals the sum of efflux. Hence the net masses of both sides of any model reaction have to be equal. Reactions where at least one metabolite does not have a formula are not considered to be balanced, even though the remaining metabolites participating in the reaction might be. Implementation: For each reaction that isn't a boundary or biomass reaction check if each metabolite has a non-zero elements attribute and if so calculate if the overall element balance of reactants and products is equal to zero.