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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
3SLAR 3-sulfolactaldehyde reductase GAP
4HTHRK 4-Hydroxy-L-threonine kinase GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
ABTA 4-aminobutyrate transaminase GAP
ACGK acetylglutamate kinase GAP
AKGDH 2-Oxogluterate dehydrogenase GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLK Allose kinase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLULPE Allulose 6-phosphate epimerase GAP
AMANAPEr N-acetylmannosamine 6-phosphate epimerase GAP
AMANK N-acetyl-D-mannosamine kinase GAP
AMPNTAT aminoalkylphosphonate N-acetyltransferase GAP
__Ecoli_panGEMs__ARBTNabcpp Aerobactin transport via ABC system (periplasm) GAP
ARMEPNS ?-D-ribose 1-methylphosphonate 5-triphosphate synthase GAP
CD2abcpp Cadmium (Cd+2) ABC transporter (periplasm) GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
COBALT2abcpp Cobalt (Co+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__CPGNabcpp Coprogen transport via ABC system (periplasm) GAP
CPL carbon-phosphorous lyase GAP
CU2abcpp Copper (Cu+2) ABC transporter (periplasm) GAP
CYSabc2pp L-cysteine export via ABC system (cytoplasm to periplasm) GAP
DCTPD dCTP deaminase GAP
DDGALK 2-dehydro-3-deoxygalactonokinase GAP
__Ecoli_panGEMs__DHBSZ3FEabcpp 23dhbsz3 Fe III transport via ABC system periplasm GAP
DHNCOAS 1,4-dihydroxy-2-napthoyl-CoA synthase GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__FDMO FMNH2-dependent monooxygenase GAP
__Ecoli_panGEMs__FDMO2 FMNH2-dependent monooxygenase (methanesulfonate) GAP
__Ecoli_panGEMs__FDMO3 FMNH2-dependent monooxygenase (ethanesulfonate) GAP
__Ecoli_panGEMs__FDMO4 FMNH2-dependent monooxygenase (butanesulfonate) GAP
__Ecoli_panGEMs__FDMO6 FMNH2-dependent monooxygenase (sulfoacetate) GAP
FE2t2pp iron (II) transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FE3HOXabcpp Ferric-dicitrate transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FECRMabcpp Ferrichrome transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) GAP
FEENTERtpp enterochelin transport (secretion) GAP
__Ecoli_panGEMs__FEOXAMabcpp Ferroxamine transport via ABC system (periplasm) GAP
G3PD5 glycerol-3-phosphate dehydrogenase (ubiquinone-8) GAP
G3PD6 glycerol-3-phosphate dehydrogenase (menaquinone-8) GAP
G3PD7 glycerol-3-phosphate dehydrogenase (demethylmenaquinone-8) GAP
G6Pt6_2pp Glucose-6-phosphate transport via phosphate antiport (periplasm) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport (periplasm) GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
__Ecoli_panGEMs__GHBDHx Gamma-hydroxybutyrate dehydrogenase (NADH) GAP
GLYCTO2 Glycolate oxidase GAP
GLYCTO3 Glycolate oxidase GAP
GLYCTO4 Glycolate oxidase GAP
GPDDA1 Glycerophosphodiester phosphodiesterase (Glycerophosphocholine) GAP
GPDDA2 Glycerophosphodiester phosphodiesterase (Glycerophosphoethanolamine) GAP
GPDDA3 Glycerophosphodiester phosphodiesterase (Glycerophosphoserine) GAP
GPDDA4 Glycerophosphodiester phosphodiesterase (Glycerophosphoglycerol) GAP
GPDDA5 Glycerophosphodiester phosphodiesterase (Glycerophosphoinositol) GAP
GTHRDabc2pp glutathione export via ABC system (cytoplasm to periplasm) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
HG2abcpp Mercury (Hg+2) ABC transporter (periplasm) GAP
HMBS hydroxymethylbilane synthase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
HSK homoserine kinase GAP
HSTPT histidinol-phosphate transaminase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
IPPMIa 3-isopropylmalate dehydratase GAP
IPPMIb 2-isopropylmalate hydratase GAP
Kabcpp Potassium ABC transporter (periplasm) GAP
LACZ b-galactosidase GAP
MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport (periplasm) GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
MNt2pp manganese (Mn+2) transport in via proton symport (periplasm) GAP
NADH17pp NADH dehydrogenase (menaquinone-8 & 3 protons) (periplasm) GAP
NADH18pp NADH dehydrogenase (demethylmenaquinone-8 & 3 protons) (periplasm) GAP
NADHXD NADHX dehydratase GAP
NADHXE NADHX epimerase GAP
NADPHXD NADPHX dehydratase GAP
NADPHXE NADPHX epimerase GAP
NHFRBO NADH:flavorubredoxin oxidoreductase GAP
NI2abcpp Nickle (Ni+2) ABC transporter (periplasm) GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OMMBLHXy 2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NADPHl) GAP
P5CD 1-pyrroline-5-carboxylate dehydrogenase GAP
PHEtipp L-phenylalanine transport out (periplasm) GAP
PRCPD 5-phospho-?-D-ribosyl 1,2-cyclic phosphate phosphodiesterase GAP
PROD3 Proline dehydrogenase (q8) GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
R15BPK ribose-1,5-bisphosphokinase GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
RPNTPH RPnTP hydrolase GAP
SELabcpp selenatenate transport via ABC system (periplasm) GAP
SEPHCHCS 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase GAP
SHGO S-2-hydroxyglutarate oxidase GAP
SLNTabcpp selenite ABC transporter (periplasm) GAP
SQGH sulfoquinovosidase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
__Ecoli_panGEMs__THZPSN3 Thiazole phosphate synthesis GAP
TRPtipp L-tryptophan transport out (periplasm) GAP
__Ecoli_panGEMs__TSULabcpp Thiosulfate transport via ABC system (periplasm) GAP
TYRtipp L-tyrosine transport out (periplasm) GAP
UDPGALM UDPgalactopyranose mutase GAP
ZN2abcpp Zinc (Zn+2) ABC transporter, efflux (periplasm) GAP