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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
3HPADHi 3-Hydroxypropanal Dehydrogenase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
5DGLCNR 5-dehydro-D-gluconate reductase GAP
5DGLCNt2rpp 5-Dehydro-D-gluconate transport via proton symport, reversible (periplasm) GAP
__Ecoli_panGEMs__AACPS1 Acyl-[acyl-carrier-protein] synthetase (n-C14:0) GAP
__Ecoli_panGEMs__AACPS2 Acyl-[acyl-carrier-protein] synthetase (n-C14:1) GAP
__Ecoli_panGEMs__AACPS3 Acyl-[acyl-carrier-protein] synthetase (n-C16:0) GAP
__Ecoli_panGEMs__AACPS4 Acyl-[acyl-carrier-protein] synthetase (n-C16:1) GAP
__Ecoli_panGEMs__AACPS5 Acyl-[acyl-carrier-protein] synthetase (n-C18:1) GAP
__Ecoli_panGEMs__AACPS6 Acyl-[acyl-carrier-protein] synthetase (n-C18:0) GAP
__Ecoli_panGEMs__AACPS7 Acyl-[acyl-carrier-protein] synthetase (n-C12:0) GAP
__Ecoli_panGEMs__AACPS8 Acyl-[acyl-carrier-protein] synthetase (n-C10:0) GAP
__Ecoli_panGEMs__AACPS9 Acyl-[acyl-carrier-protein] synthetase (n-C8:0) GAP
__Ecoli_panGEMs__ACMUMptspp N-acetylmuramate transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__ACOATA Acetyl-CoA ACP transacylase GAP
__Ecoli_panGEMs__ACPPAT120 Acyl-(acyl carrier protein):phosphate acyltransferase (C12:0) GAP
__Ecoli_panGEMs__ACPPAT140 Acyl-(acyl carrier protein):phosphate acyltransferase (C14:0) GAP
__Ecoli_panGEMs__ACPPAT141 Acyl-(acyl carrier protein):phosphate acyltransferase (C14:1) GAP
__Ecoli_panGEMs__ACPPAT160 Acyl-(acyl carrier protein):phosphate acyltransferase (C16:0) GAP
__Ecoli_panGEMs__ACPPAT161 Acyl-(acyl carrier protein):phosphate acyltransferase (C16:1) GAP
__Ecoli_panGEMs__ACPPAT180 Acyl-(acyl carrier protein):phosphate acyltransferase (C18:0) GAP
__Ecoli_panGEMs__ACPPAT181 Acyl-(acyl carrier protein):phosphate acyltransferase (C18:1) GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
AI2abcpp autoinducer-2 ABC transporter GAP
AI2K autoinducer-2 kinase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
CHLabcpp choline transport via ABC system (periplasm) GAP
CHLt3pp choline transport via proton antiport (periplasm) GAP
CRNabcpp L-carnitine transport via ABC system (periplasm) GAP
CRNDabcpp D-carnitine transport via ABC system (periplasm) GAP
CTBTabcpp crotonobetaine transport via ABC system (periplasm) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
DDGALK 2-dehydro-3-deoxygalactonokinase GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
__Ecoli_panGEMs__DHBSZ3FEabcpp 23dhbsz3 Fe III transport via ABC system periplasm GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
F6Pt6_2pp Fructose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__FDMO FMNH2-dependent monooxygenase GAP
__Ecoli_panGEMs__FDMO2 FMNH2-dependent monooxygenase (methanesulfonate) GAP
__Ecoli_panGEMs__FDMO3 FMNH2-dependent monooxygenase (ethanesulfonate) GAP
__Ecoli_panGEMs__FDMO4 FMNH2-dependent monooxygenase (butanesulfonate) GAP
__Ecoli_panGEMs__FDMO6 FMNH2-dependent monooxygenase (sulfoacetate) GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3HOXtonex Fe(III)hydroxamine transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FECRMtonex Ferrichrome transport via ton system (extracellular) GAP
__Ecoli_panGEMs__FEENTERabcpp Fe-enterobactin transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__FEOXAMtonex Ferroxamine transport via ton system (extracellular) GAP
FHL Formate-hydrogen lyase GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSK Fructoselysine Kinase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__G3PAT120 Glycerol-3-phosphate acyltransferase (C12:0) GAP
__Ecoli_panGEMs__G3PAT140 Glycerol-3-phosphate acyltransferase (C14:0) GAP
__Ecoli_panGEMs__G3PAT141 Glycerol-3-phosphate acyltransferase (C14:1) GAP
__Ecoli_panGEMs__G3PAT160 Glycerol-3-phosphate acyltransferase (C16:0) GAP
__Ecoli_panGEMs__G3PAT161 Glycerol-3-phosphate acyltransferase (C16:1) GAP
__Ecoli_panGEMs__G3PAT180 Glycerol-3-phosphate acyltransferase (C18:0) GAP
__Ecoli_panGEMs__G3PAT181 Glycerol-3-phosphate acyltransferase (C18:1) GAP
G6Pt6_2pp Glucose-6-phosphate transport via phosphate antiport (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
GAM6Pt6_2pp D-Glucosamine 6-phosphate transport via phosphate antiport (periplasm) GAP
GGGABADr gamma-glutamyl-gamma aminobutyric acid dehydrogenase GAP
GGPTRCO gamma glutamyl putrescine oxidase GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GLYBabcpp Glycine betaine transport via ABC system (periplasm) GAP
GLYBt3pp Glycine betaine transport via proton antiport (periplasm) GAP
GLYCK glycerate kinase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
IDOND L-idonate 5-dehydrogenase GAP
IDOND2 L-indonate 5-dehydrogenase (NADP) GAP
IDONt2rpp L-idonate transport via proton symport, reversible (periplasm) GAP
IPPMIa 3-isopropylmalate dehydratase GAP
IPPMIb 2-isopropylmalate hydratase GAP
MAN6Pt6_2pp Mannose-6-phosphate transport via phosphate antiport (periplasm) GAP
MANGLYCptspp 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm) GAP
MANPGH 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase GAP
__Ecoli_panGEMs__MCOATA Malonyl-CoA-ACP transacylase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
NADHXD NADHX dehydratase GAP
NADHXE NADHX epimerase GAP
NADPHXD NADPHX dehydratase GAP
NADPHXE NADPHX epimerase GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OPHHXy 2-Octaprenylphenol hydroxylase (NADPH) GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
PACCOAL phenylacetate-CoA ligase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
__Ecoli_panGEMs__PAI2I Phospho-AI-2 isomerase GAP
__Ecoli_panGEMs__PAI2T 3-hydroxy-2,4-pentadione 5-phosphate thiolase GAP
PEAMNOpp Phenethylamine oxidase GAP
PPAt4pp Na+/Propionate symporter (periplasm) GAP
PROabcpp L-proline transport via ABC system (periplasm) GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
PROt4pp Na+/Proline-L symporter (periplasm) GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
PTRCORNt7pp putrescine/ornithine antiporter (periplasm) GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
RHMND L-rhamnonate dehydratase GAP
SELabcpp selenatenate transport via ABC system (periplasm) GAP
SERAT serine O-acetyltransferase GAP
SLNTabcpp selenite ABC transporter (periplasm) GAP
SUCptspp sucrose transport via PEP:Pyr (periplasm) GAP
TAURabcpp taurine transport via ABC system (periplasm) GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__TSULabcpp Thiosulfate transport via ABC system (periplasm) GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
__Ecoli_panGEMs__UAGAAT UDP-N-acetylglucosamine acyltransferase GAP
UDPGALM UDPgalactopyranose mutase GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP