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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
__Ecoli_panGEMs__2HPTCOAT 2-hydroxycyclohepta-1,4,6-triene-1-carboxyl-CoA thioesterase GAP
3OXCOAT 3-oxoadipyl-CoA thiolase GAP
42A12BOOXpp 4-(2-Aminoethyl)-1,2-benzenediol:oxygen oxidoreductase(deaminating)(flavin-containing) GAP
ADOCBLtonex Adenosylcobalimin transport via ton system (extermal) GAP
AI2abcpp autoinducer-2 ABC transporter GAP
AICART phosphoribosylaminoimidazolecarboxamide formyltransferase GAP
ALDD19xr aldehyde dehydrogenase (phenylacetaldehyde, NAD) GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLK Allose kinase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLTAMH2 Allantoate amidinohydrolase GAP
ALLTN allantoinase GAP
ALLTNt2rpp allantoin transport in via proton symport (periplasm) GAP
ALLULPE Allulose 6-phosphate epimerase GAP
AMMQLT8 S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8) GAP
__Ecoli_panGEMs__BMOGDS1 Bis-molybdopterin guanine dinucleotide synthase (single GDP) GAP
__Ecoli_panGEMs__BMOGDS2 Bis-molybdopterin guanine dinucleotide synthase GAP
__Ecoli_panGEMs__BWCOGDS1 Tungsten bispterin guanine dinucleotide synthase (single GDP) GAP
__Ecoli_panGEMs__BWCOGDS2 Tungsten bispterin guanine dinucleotide synthase GAP
CBItonex Cobinamide transport via ton system (extermal) GAP
CBL1tonex Cob(1)alamin transport via ton system (extermal) GAP
CHOLATEtpp cholate transport via proton antiport GAP
CTECOAI6 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI7 3-cis-2-trans-enoyl-CoA isomerase GAP
CTECOAI8 3-cis-2-trans-enoyl-CoA isomerase GAP
__Ecoli_panGEMs__DAPAL 2,3-diaminopropionate amonnia lyase GAP
DHACOAH 2,3-dehydroadipyl-CoA hydratase GAP
__Ecoli_panGEMs__DSBAO1 DsbA protein reoxidation reaction (aerobic) GAP
__Ecoli_panGEMs__DSBAO2 DsbA protein reoxidation reaction (anaerobic) GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
__Ecoli_panGEMs__FADRx FAD reductase GAP
__Ecoli_panGEMs__FE3Ri Fe(III) reduction GAP
FLVRx flavin reductase (NAD) GAP
FRULYSDG Fructoselysine phosphate deglycase GAP
FRULYSE fructoselysine 3-epimerase GAP
FRULYSK Fructoselysine Kinase GAP
FRULYSt2pp Fructoselysine transport via proton symport (periplasm) GAP
FUCtpp L-fucose transport via proton symport (periplasm) GAP
GALCTNLt2pp L-galactonate transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GLUR glutamate racemase GAP
GLXCL glyoxalate carboligase GAP
GLYALDtpp Glyceraldehyde facilitated diffusion (periplasm) GAP
GLYCK glycerate kinase GAP
GLYOX hydroxyacylglutathione hydrolase GAP
GLYtpp glycine transport via facillitated diffusion GAP
GMHEPPA D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase GAP
GUAD_1 guanine deaminase GAP
HADPCOADH3 3-hydroxyadipyl-CoA dehydrogenase (NAD+) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
HPACOAT hydroxyphenylacetyl-CoA thioesterase GAP
HPYRI hydroxypyruvate isomerase GAP
HSST homoserine O-succinyltransferase GAP
HXAND hypoxanthine dehydrogenase GAP
ICL Isocitrate lyase GAP
IMPC IMP cyclohydrolase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
METabcpp L-methionine transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__METDabcpp D-methionine transport via ABC system (periplasm) GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__MOCDS Molybdopterin cytidine dinucleotide synthase GAP
__Ecoli_panGEMs__MOGDS Molybdopterin guanine dinucleotide synthase GAP
NADTRHD NAD transhydrogenase GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OMBZLM 2-Octaprenyl-6-methoxy-benzoquinol methylase GAP
OXCOAHDH oxepin-CoA hydrolase/ 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (NADP+) GAP
OXDHCOAT 3-oxo-5,6-dehydrosuberyl-CoA thiolase GAP
PACCOAE ring 1,2-phenylacetyl-CoA epoxidase (NADPH) GAP
PACCOAL phenylacetate-CoA ligase GAP
PACOAT phenylacetyl-CoA thioesterase GAP
PEAMNOpp Phenethylamine oxidase GAP
PHDA phenylhydantoinase GAP
PNTK pantothenate kinase GAP
PPPGO protoporphyrinogen oxidase (aerobic) GAP
PPPGO3 protoporphyrinogen oxidase (anaerobic) GAP
PRAGSr phosphoribosylglycinamide synthase GAP
PSCLYSt2pp psicoselysine transport via proton symport (periplasm) GAP
REPHACCOAI ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TYROXDApp Tyramine:oxygen oxidoreductase(deaminating)(flavin-containing) (periplasm) GAP
UAPGR UDP-N-acetylenolpyruvoylglucosamine reductase GAP
UDPGALM UDPgalactopyranose mutase GAP
UGCIAMH ureidoglycine aminohydrolase GAP
UGLYCH Ureidoglycolate hydrolase GAP
URDGLYCD ureidoglycolate dehydrogenase GAP
UREAtpp Urea transport via facilitate diffusion (periplasm) GAP
XAND xanthine dehydrogenase GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP