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Gene
GAP
Associated reactions
  BiGG ID Name Gene reaction rule
23DOGULNt4pp Na+/ 2,3-Dioxo-L-gulonate symport (periplasm) GAP
2DDARAA 2-dehydro-3-deoxy-D-arabinonate Aldolase GAP
3KGK 3-keto-L-gulonate kinase GAP
ADNt2pp adenosine transport in via proton symport (periplasm) GAP
AI2abcpp autoinducer-2 ABC transporter GAP
AI2K autoinducer-2 kinase GAP
ALLabcpp D-allose transport via ABC system (periplasm) GAP
ALLK Allose kinase GAP
ALLPI Allose 6-phosphate isomerase GAP
ALLTAMH2 Allantoate amidinohydrolase GAP
ALLTN allantoinase GAP
ALLTNt2rpp allantoin transport in via proton symport (periplasm) GAP
ALLULPE Allulose 6-phosphate epimerase GAP
ALR2x aldose reductase (methylglyoxal) (nadh) GAP
CADVtpp Lysine/Cadaverine antiporter (periplasm) GAP
CGLYabcpp L-Cysteinylglycine (Cys-Gly) transport via ABC system (periplasm) GAP
CSND Cytosine deaminase GAP
CSNt2pp cytosine transport in via proton symport (periplasm) GAP
CYNTAH Cyanate aminohydrolase GAP
CYNTt2pp Cyanate transport via proton symport (periplasm) GAP
CYTDt2pp cytidine transport in via proton symport (periplasm) GAP
__Ecoli_panGEMs__DAPAL 2,3-diaminopropionate amonnia lyase GAP
DHCINDO 2,3-dihydroxycinnamate 1,2-dioxygenase GAP
DXYLTD D-xylonate dehydratase GAP
__Ecoli_panGEMs__ECA4OALpp Enterobacterial common antigen (x4) O-antigen ligase (periplasm) GAP
FALDH2 formaldehyde dehydrogenase GAP
__Ecoli_panGEMs__FE3DCITabcpp Iron transport from ferric-dicitrate via ABC system (periplasm) GAP
__Ecoli_panGEMs__FE3DCITtonex Ferric-dicitrate transport via ton system (extracellular) GAP
FUCtpp L-fucose transport via proton symport (periplasm) GAP
__Ecoli_panGEMs__GALT1 Galactosyltransferase I (LPS core synthesis) GAP
GALTptspp Galactitol transport via PEP:Pyr PTS (periplasm) GAP
__Ecoli_panGEMs__GDMANE GDP-4-dehydro-6-deoxy-D-mannose epimerase GAP
GDPMNH GDP-mannose mannosyl hydrolase GAP
__Ecoli_panGEMs__GLCTR2 Glucosyltransferase II (LPS core synthesis) GAP
__Ecoli_panGEMs__GLCTR3 Glucosyltransferase III (LPS core synthesis) GAP
GLYCK glycerate kinase GAP
__Ecoli_panGEMs__GMAND GDP-D-mannose dehydratase GAP
GOFUCR GDP-4-oxo-L-fucose reductase GAP
HCINNMt2rpp 3-hydroxycinnamic acid transport via proton symport, reversible (periplasm) GAP
HCYSMT homocysteine S-methyltransferase GAP
HCYSMT2 Homocysteine Methyltransferase GAP
__Ecoli_panGEMs__HEPK2 LPS heptose kinase II (LPS core synthesis) GAP
__Ecoli_panGEMs__HEPT4 Heptosyltransferase IV (LPS core synthesis) GAP
HKNDDH 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase GAP
HKNTDH_1 2-hydroxy-6-ketononotrienedioate hydrolase GAP
HOPNTAL 4-hydroxy-2-oxopentanoate aldolase GAP
HPPPNDO 2,3-dihydroxypheylpropionate 1,2-dioxygenase GAP
HPPPNt2rpp 3-(3-hydroxyphenyl)propionate transport via proton symport, reversible (periplasm) GAP
HXAND hypoxanthine dehydrogenase GAP
INOSTO myo-Inositol:oxygen oxidoreductase GAP
LCARSyi lacaldehyde reductase (S-propane-1,2-diol forming) GAP
MALDDH malate decarboxylating oxidoreductase (decarboxylating) GAP
MAN1PT2 mannose-1-phosphate guanylyltransferase (GDP) GAP
MCITD 2-methylcitrate dehydratase GAP
MCITL2 methylisocitrate lyase GAP
MCITS 2-methylcitrate synthase GAP
MEPNabcpp methylpshophonic acid abc transporter GAP
MMETt2pp S-methylmethionine permease (periplasm) GAP
__Ecoli_panGEMs__MOAT3C 3-deoxy-D-manno-octulosonic acid transferase III (LPS core biosynthesis) GAP
__Ecoli_panGEMs__MOCDS Molybdopterin cytidine dinucleotide synthase GAP
__Ecoli_panGEMs__O16A4Lpp O16 anitgen (x4) ligase (periplasm) GAP
__Ecoli_panGEMs__O16AP1pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP2pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AP3pp O16 antigen polymerase (periplasm) GAP
__Ecoli_panGEMs__O16AT Rhamanosyl-N-acetylglucosamyl-undecaprenyl diphosphate O-acetyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16AUNDtpp O16 antigen (flippase, cytoplasm to periplasm) GAP
__Ecoli_panGEMs__O16GALFT Galactofuranosyltransferase (LPS O16 antigen biosynthesis) GAP
__Ecoli_panGEMs__O16GLCT1 Glucosyltransferase I (LPS O16 antigen biosynthesis) GAP
OP4ENH 2-oxopent-4-enoate hydratase GAP
PHDA phenylhydantoinase GAP
PMANM phosphomannomutase GAP
PPDOy Propane-1,2-diol:NADP+ 1-oxidoreductase GAP
PROGLYabcpp L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm) GAP
__Ecoli_panGEMs__PUACGAMS Poly-?-1,6-N-acetyl-D-glucosamine synthase GAP
__Ecoli_panGEMs__PUACGAMtr Transport of poly-?-1,6-N-acetyl-D-glucosamine (poly-?-1,6-N-acetyl-D-glucosamine synthase) GAP
PUNP7 purine-nucleoside phosphorylase (Xanthosine) GAP
__Ecoli_panGEMs__RHAT1 Rhamnosyltransferase I (LPS core biosynthesis) GAP
SERtpp L-serine export via facilitated transport GAP
SHGO S-2-hydroxyglutarate oxidase GAP
TDPDRE dTDP-4-dehydrorhamnose 3,5-epimerase GAP
TDPDRR dTDP-4-dehydrorhamnose reductase GAP
THMDt2pp thymidine transport in via proton symport (periplasm) GAP
UDPGALM UDPgalactopyranose mutase GAP
UDPGPT undecaprenyl-phosphate glucose phosphotransferase GAP
UGCIAMH ureidoglycine aminohydrolase GAP
URIt2pp uridine transport in via proton symport (periplasm) GAP
XAND xanthine dehydrogenase GAP
XTSNt2rpp Xanthosine transport via proton symport (periplasm) GAP
XYLt2pp D-xylose transport in via proton symport (periplasm) GAP
XYLUt2pp L-xylulose transport in via proton symport (periplasm) GAP