!!omap
- metabolites:
  - !!omap
    - id: 10fthf_c
    - name: (6R)-10-formyltetrahydrofolate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C20H21N7O7
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C20H21N7O7
    - annotation: !!omap
      - biggr: 10fthf_c:-2
      - biocyc: META:10-FORMYL-THF
      - chebi:
        - CHEBI:195366
      - hmdb: HMDB00972
      - inchikey: AUFGTPPARQZWDO-YPMHNXCESA-L
      - kegg.compound: C00234
      - metanetx.chemical: MNXM237
      - reactome:
        - R-ALL-419151
        - R-ALL-5389850
      - sbo: SBO:0000247
      - seed.compound: cpd00201
  - !!omap
    - id: 12dgr160_c
    - name: 1,2-dipalmitoyl-sn-glycerol
    - compartment: C_c
    - charge: 0.0
    - formula: C35H68O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C35H68O5
    - annotation: !!omap
      - biggr: 12dgr160_c:0
      - chebi:
        - CHEBI:82929
      - metanetx.chemical: MNXM3132
      - sbo: SBO:0000247
  - !!omap
    - id: 12dgr160_p
    - name: 1,2-dipalmitoyl-sn-glycerol
    - compartment: C_p
    - charge: 0.0
    - formula: C35H68O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C35H68O5
    - annotation: !!omap
      - biggr: 12dgr160_p:0
      - chebi:
        - CHEBI:82929
      - metanetx.chemical: MNXM3132
      - sbo: SBO:0000247
  - !!omap
    - id: 12ppd__S_c
    - name: (S)-propane-1,2-diol
    - compartment: C_c
    - charge: 0.0
    - formula: C3H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H8O2
    - annotation: !!omap
      - biggr: 12ppd__S_c:0
      - biocyc: META:PROPANE-1-2-DIOL
      - chebi:
        - CHEBI:29002
      - hmdb: HMDB06213
      - inchikey: DNIAPMSPPWPWGF-VKHMYHEASA-N
      - kegg.compound: C02917
      - metanetx.chemical: MNXM1255
      - sbo: SBO:0000247
      - seed.compound: cpd19024
  - !!omap
    - id: 13dpg_c
    - name: 3-phosphonato-D-glyceroyl phosphate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C3H4O10P2
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C3H4O10P2
    - annotation: !!omap
      - biggr: 13dpg_c:-4
      - biocyc: META:DPG
      - chebi:
        - CHEBI:57604
      - hmdb: HMDB62758
      - inchikey: LJQLQCAXBUHEAZ-UWTATZPHSA-J
      - kegg.compound: C00236
      - metanetx.chemical: MNXM261
      - reactome: R-ALL-29800
      - sbo: SBO:0000247
      - seed.compound: cpd00203
  - !!omap
    - id: 13ppd_c
    - name: propane-1,3-diol
    - compartment: C_c
    - charge: 0.0
    - formula: C3H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H8O2
    - annotation: !!omap
      - biggr: 13ppd_c:0
      - biocyc: META:CPD-347
      - chebi:
        - CHEBI:16109
      - inchikey: YPFDHNVEDLHUCE-UHFFFAOYSA-N
      - kegg.compound: C02457
      - metanetx.chemical: MNXM2861
      - sbo: SBO:0000247
      - seed.compound: cpd01618
  - !!omap
    - id: 1p3h5c_c
    - name: (3R,5S)-1-pyrroline-3-hydroxy-5-carboxylate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H6NO3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H6NO3
    - annotation: !!omap
      - biggr: 1p3h5c_c:-1
      - biocyc: META:PYRROLINE-HYDROXY-CARBOXYLATE
      - chebi:
        - CHEBI:62612
      - hmdb: HMDB62585
      - inchikey: WFOFKRKDDKGRIK-DMTCNVIQSA-M
      - kegg.compound: C04281
      - metanetx.chemical: MNXM114091
      - sbo: SBO:0000247
      - seed.compound: cpd02625
  - !!omap
    - id: pyr5carb_c
    - name: (S)-1-pyrroline-5-carboxylate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H6NO2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H6NO2
    - annotation: !!omap
      - biggr: pyr5carb_c:-1
      - biocyc: META:L-DELTA1-PYRROLINE_5-CARBOXYLATE
      - chebi:
        - CHEBI:17388
      - hmdb:
        - HMDB01301
        - HMDB02240
      - inchikey: DWAKNKKXGALPNW-UHFFFAOYSA-M
      - kegg.compound:
        - C03912
        - C04322
      - metanetx.chemical: MNXM1617
      - reactome:
        - R-ALL-113590
        - R-ALL-35305
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02431
        - cpd02651
        - cpd29655
  - !!omap
    - id: __iPKB_Clostridiaceae__23ddhb_c
    - name: 2,3-Dihydro-2,3-dihydroxybenzoate
    - compartment: C_c
    - charge: 0.0
    - formula: C7H7O4
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C7H7O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__23ddhb_c:0
      - biocyc: META:DIHYDRO-DIOH-BENZOATE
      - chebi:
        - CHEBI:11420
        - CHEBI:11423
        - CHEBI:15941
        - CHEBI:19311
        - CHEBI:48968
        - CHEBI:57576
        - CHEBI:58764
        - CHEBI:877
      - inchikey: INCSWYKICIYAHB-WDSKDSINSA-M
      - kegg.compound: C04171
      - metanetx.chemical: MNXM114261
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02566
        - cpd29666
  - !!omap
    - id: 23dhb_c
    - name: 2,3-dihydroxybenzoate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H5O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H5O4
    - annotation: !!omap
      - biggr: 23dhb_c:-1
      - biocyc: META:2-3-DIHYDROXYBENZOATE
      - chebi:
        - CHEBI:36654
      - hmdb: HMDB00397
      - inchikey: GLDQAMYCGOIJDV-UHFFFAOYSA-M
      - kegg.compound: C00196
      - metanetx.chemical: MNXM455
      - sbo: SBO:0000247
      - seed.compound: cpd00168
  - !!omap
    - id: 23dhdp_c
    - name: (S)-2,3-dihydrodipicolinate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H5NO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H5NO4
    - annotation: !!omap
      - biggr: 23dhdp_c:-2
      - biocyc: META:2-3-DIHYDRODIPICOLINATE
      - chebi:
        - CHEBI:30620
      - hmdb: HMDB12247
      - inchikey: UWOCFOFVIBZJGH-YFKPBYRVSA-L
      - kegg.compound: C03340
      - metanetx.chemical: MNXM807
      - sbo: SBO:0000247
      - seed.compound: cpd02120
  - !!omap
    - id: 23dhmb_c
    - name: (R)-2,3-dihydroxy-3-methylbutanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H9O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H9O4
    - annotation: !!omap
      - biggr: 23dhmb_c:-1
      - biocyc: META:CPD-13357
      - chebi:
        - CHEBI:49072
      - hmdb: HMDB12141
      - inchikey: JTEYKUFKXGDTEU-VKHMYHEASA-M
      - kegg.compound: C04272
      - lipidmaps: LMFA01050453
      - metanetx.chemical: MNXM114097
      - sbo: SBO:0000247
      - seed.compound: cpd19030
  - !!omap
    - id: 23dhmp_c
    - name: (2R,3R)-2,3-dihydroxy-3-methylpentanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H11O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H11O4
    - annotation: !!omap
      - biggr: 23dhmp_c:-1
      - biocyc: META:1-KETO-2-METHYLVALERATE
      - chebi:
        - CHEBI:49258
      - hmdb: HMDB12140
      - inchikey: PDGXJDXVGMHUIR-UJURSFKZSA-M
      - kegg.compound: C06007
      - lipidmaps: LMFA01050452
      - metanetx.chemical: MNXM1202
      - sbo: SBO:0000247
      - seed.compound: cpd19046
  - !!omap
    - id: 25aics_c
    - name: SAICAR(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C13H15N4O12P
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C13H15N4O12P
    - annotation: !!omap
      - biggr: 25aics_c:-4
      - biocyc: META:P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE
      - chebi:
        - CHEBI:58443
      - hmdb:
        - HMDB00797
        - HMDB06274
      - inchikey: NAQGHJTUZRHGAC-ZZZDFHIKSA-J
      - kegg.compound: C04823
      - metanetx.chemical: MNXM607
      - reactome: R-ALL-111399
      - sbo: SBO:0000247
      - seed.compound: cpd19032
  - !!omap
    - id: 25drapp_c:-2
    - name: 2,5-diamino-6-(1-D-ribosylamino)pyrimidin-4(3H)-one 5'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H14N5O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H14N5O8P
    - annotation: !!omap
      - biggr: 25drapp_c:-2
      - chebi:
        - CHEBI:58614
        - CHEBI:59545
      - metanetx.chemical: MNXM90906
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__25drapp_DUP1_c
    - name: ''
    - compartment: C_c
    - charge: -2.0
    - formula: C9H14N5O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H14N5O8P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__25drapp_DUP1_c:-2
      - biocyc: META:DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR
      - chebi:
        - CHEBI:11446
        - CHEBI:19368
        - CHEBI:29114
        - CHEBI:58614
        - CHEBI:59545
        - CHEBI:59546
        - CHEBI:927
      - inchikey: OCLCLRXKNJCOJD-UMMCILCDSA-L
      - kegg.compound: C01304
      - metanetx.chemical: MNXM648
      - sbo: SBO:0000247
  - !!omap
    - id: 26dap_LL_c
    - name: LL-2,6-diaminopimelic acid
    - compartment: C_c
    - charge: 0.0
    - formula: C7H14N2O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H14N2O4
    - annotation: !!omap
      - biggr: 26dap_LL_c:0
      - biocyc: META:LL-DIAMINOPIMELATE
      - chebi:
        - CHEBI:57609
        - CHEBI:16026
      - hmdb: HMDB01370
      - inchikey: GMKMEZVLHJARHF-WHFBIAKZSA-N
      - kegg.compound: C00666
      - lipidmaps: LMFA01170102
      - metanetx.chemical: MNXM644
      - sbo: SBO:0000247
      - seed.compound: cpd00504
  - !!omap
    - id: 26dap__M_c
    - name: meso-2,6-diaminopimelic acid dizwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C7H14N2O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H14N2O4
    - annotation: !!omap
      - biggr: 26dap__M_c:0
      - biocyc: META:MESO-DIAMINOPIMELATE
      - chebi:
        - CHEBI:57791
        - CHEBI:16488
      - inchikey: GMKMEZVLHJARHF-SYDPRGILSA-N
      - kegg.compound: C00680
      - metanetx.chemical: MNXM529
      - sbo: SBO:0000247
      - seed.compound: cpd00516
  - !!omap
    - id: __iPKB_Clostridiaceae__2ahbut_c
    - name: (S)-2-Aceto-2-hydroxybutanoate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H9O4
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C6H9O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2ahbut_c:0
      - biocyc: META:2-ACETO-2-HYDROXY-BUTYRATE
      - chebi:
        - CHEBI:18730
        - CHEBI:27681
        - CHEBI:373
        - CHEBI:49256
      - hmdb:
        - HMDB06854
        - HMDB06900
      - inchikey: VUQLHQFKACOHNZ-LURJTMIESA-M
      - kegg.compound: C06006
      - lipidmaps: LMFA01050383
      - metanetx.chemical: MNXM114220
      - sbo: SBO:0000247
      - seed.compound: cpd19045
  - !!omap
    - id: 2ahhmp_c
    - name: 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol
    - compartment: C_c
    - charge: 0.0
    - formula: C7H9N5O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H9N5O2
    - annotation: !!omap
      - biggr: 2ahhmp_c:0
      - chebi:
        - CHEBI:44841
        - CHEBI:17083
      - metanetx.chemical: MNXM146055
      - sbo: SBO:0000247
  - !!omap
    - id: 2ameph_c
    - name: (2-aminoethyl)phosphonic acid
    - compartment: C_c
    - charge: 0.0
    - formula: C2H8NO3P
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H8NO3P
    - annotation: !!omap
      - biggr: 2ameph_c:0
      - biocyc: META:CPD-1106
      - chebi:
        - CHEBI:57418
        - CHEBI:15573
      - hmdb: HMDB11747
      - inchikey: QQVDJLLNRSOCEL-UHFFFAOYSA-N
      - kegg.compound: C03557
      - metanetx.chemical: MNXM1692
      - sbo: SBO:0000247
      - seed.compound: cpd02233
  - !!omap
    - id: 2ameph_e
    - name: (2-aminoethyl)phosphonic acid
    - compartment: C_e
    - charge: 0.0
    - formula: C2H8NO3P
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H8NO3P
    - annotation: !!omap
      - biggr: 2ameph_e:0
      - biocyc: META:CPD-1106
      - chebi:
        - CHEBI:57418
        - CHEBI:15573
      - hmdb: HMDB11747
      - inchikey: QQVDJLLNRSOCEL-UHFFFAOYSA-N
      - kegg.compound: C03557
      - metanetx.chemical: MNXM1692
      - sbo: SBO:0000247
      - seed.compound: cpd02233
  - !!omap
    - id: 2ameph_p
    - name: (2-aminoethyl)phosphonic acid
    - compartment: C_p
    - charge: 0.0
    - formula: C2H8NO3P
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H8NO3P
    - annotation: !!omap
      - biggr: 2ameph_p:0
      - biocyc: META:CPD-1106
      - chebi:
        - CHEBI:57418
        - CHEBI:15573
      - hmdb: HMDB11747
      - inchikey: QQVDJLLNRSOCEL-UHFFFAOYSA-N
      - kegg.compound: C03557
      - metanetx.chemical: MNXM1692
      - sbo: SBO:0000247
      - seed.compound: cpd02233
  - !!omap
    - id: 2amsa_c
    - name: L-3-oxoalanine
    - compartment: C_c
    - charge: 0.0
    - formula: C3H5NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H5NO3
    - annotation: !!omap
      - biggr: 2amsa_c:0
      - biocyc: META:2-AMINOMALONATE-SEMIALDEHYDE
      - chebi:
        - CHEBI:77662
        - CHEBI:37012
      - inchikey: XMTCKNXTTXDPJX-REOHCLBHSA-N
      - kegg.compound: C11822
      - metanetx.chemical: MNXM2124
      - sbo: SBO:0000247
      - seed.compound: cpd08626
  - !!omap
    - id: 2cpr5p_c
    - name: 1-(2-carboxylatophenylamino)-1-deoxy-D-ribulose 5-phosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C12H13NO9P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C12H13NO9P
    - annotation: !!omap
      - biggr: 2cpr5p_c:-3
      - biocyc: META:CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P
      - chebi:
        - CHEBI:58613
      - inchikey: QKMBYNRMPRKVTO-MNOVXSKESA-K
      - kegg.compound: C01302
      - metanetx.chemical: MNXM1455
      - sbo: SBO:0000247
      - seed.compound: cpd00956
  - !!omap
    - id: 2dda7p_c
    - name: 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate
    - compartment: C_c
    - charge: -3.0
    - formula: C7H10O10P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C7H10O10P
    - annotation: !!omap
      - biggr: 2dda7p_c:-3
      - biocyc: META:3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P
      - chebi:
        - CHEBI:58394
      - inchikey: PJWIPEXIFFQAQZ-PUFIMZNGSA-K
      - kegg.compound: C04691
      - metanetx.chemical: MNXM1219
      - reactome: R-ALL-964909
      - sbo: SBO:0000247
      - seed.compound: cpd02857
  - !!omap
    - id: 2ddg6p_c
    - name: 2-dehydro-3-deoxy-6-phosphonato-D-gluconate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C6H8O9P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H8O9P
    - annotation: !!omap
      - biggr: 2ddg6p_c:-3
      - biocyc: META:2-KETO-3-DEOXY-6-P-GLUCONATE
      - chebi:
        - CHEBI:57569
      - hmdb: HMDB01376
      - inchikey: OVPRPPOVAXRCED-WVZVXSGGSA-K
      - kegg.compound: C04442
      - metanetx.chemical: MNXM649
      - sbo: SBO:0000247
      - seed.compound: cpd02711
  - !!omap
    - id: 2dhp_c
    - name: 2-dehydropantoate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H9O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H9O4
    - annotation: !!omap
      - biggr: 2dhp_c:-1
      - biocyc: META:2-DEHYDROPANTOATE
      - chebi:
        - CHEBI:11561
      - inchikey: PKVVTUWHANFMQC-UHFFFAOYSA-M
      - kegg.compound: C00966
      - metanetx.chemical: MNXM959
      - sbo: SBO:0000247
      - seed.compound: cpd00712
  - !!omap
    - id: 2dmmq8_c
    - name: 2-demethylmenaquinone-8
    - compartment: C_c
    - charge: 0.0
    - formula: C50H70O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C50H70O2
    - annotation: !!omap
      - biggr: 2dmmq8_c:0
      - biocyc: META:DEMETHYLMENAQUINONE
      - chebi:
        - CHEBI:48455
      - inchikey: GDUBPWSFXUAETN-AENDIINCSA-N
      - lipidmaps: LMPR02030027
      - metanetx.chemical: MNXM2178
      - sbo: SBO:0000247
      - seed.compound: cpd15352
  - !!omap
    - id: __iPKB_Clostridiaceae__2dr1p_c
    - name: 2-Deoxy-D-ribose 1-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9O7P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C5H9O7P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2dr1p_c:0
      - biocyc: META:DEOXY-D-RIBOSE-1-PHOSPHATE
      - chebi:
        - CHEBI:1081
        - CHEBI:11563
        - CHEBI:19558
        - CHEBI:28542
        - CHEBI:57259
        - CHEBI:58576
      - hmdb: HMDB01351
      - inchikey: KBDKAJNTYKVSEK-VPENINKCSA-L
      - kegg.compound: C00672
      - metanetx.chemical: MNXM789
      - reactome: R-ALL-112032
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00509
        - cpd26845
  - !!omap
    - id: 2dr5p_c
    - name: 2-deoxy-D-ribofuranose 5-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O7P
    - annotation: !!omap
      - biggr: 2dr5p_c:-2
      - biocyc: META:DEOXY-RIBOSE-5P
      - chebi:
        - CHEBI:62877
      - hmdb: HMDB01031
      - inchikey: ALQNUOMIEBHXQG-CRCLSJGQSA-L
      - kegg.compound: C00673
      - metanetx.chemical: MNXM2179
      - reactome: R-ALL-6787328
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00510
        - cpd26846
  - !!omap
    - id: 2h3opp_c
    - name: 2-hydroxy-3-oxopropanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H3O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H3O4
    - annotation: !!omap
      - biggr: 2h3opp_c:-1
      - biocyc: META:TARTRONATE-S-ALD
      - chebi:
        - CHEBI:57978
      - hmdb:
        - HMDB06781
        - HMDB06938
      - inchikey: QWBAFPFNGRFSFB-UHFFFAOYSA-M
      - kegg.compound: C01146
      - metanetx.chemical: MNXM475
      - sbo: SBO:0000247
      - seed.compound: cpd00843
  - !!omap
    - id: __iPKB_Clostridiaceae__2hetdp_c
    - name: 2-(alpha-Hydroxyethyl)thiamine diphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C14H21N4O8P2S
    - notes: !!omap
      - FORMULA: C14H21N4O8P2S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2hetdp_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: 2hxmp_c:0
    - name: salicyl alcohol
    - compartment: C_c
    - charge: 0.0
    - formula: C7H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H8O2
    - annotation: !!omap
      - biggr: 2hxmp_c:0
      - biocyc: META:CPD-173
      - chebi:
        - CHEBI:16464
      - hmdb: HMDB59709
      - inchikey: CQRYARSYNCAZFO-UHFFFAOYSA-N
      - kegg.compound: C02323
      - kegg.drug: D05790
      - metanetx.chemical: MNXM1855
      - sbo: SBO:0000247
      - seed.compound: cpd01553
  - !!omap
    - id: 2hxmp_e
    - name: salicyl alcohol
    - compartment: C_e
    - charge: 0.0
    - formula: C7H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H8O2
    - annotation: !!omap
      - biggr: 2hxmp_e:0
      - biocyc: META:CPD-173
      - chebi:
        - CHEBI:16464
      - hmdb: HMDB59709
      - inchikey: CQRYARSYNCAZFO-UHFFFAOYSA-N
      - kegg.compound: C02323
      - kegg.drug: D05790
      - metanetx.chemical: MNXM1855
      - sbo: SBO:0000247
      - seed.compound: cpd01553
  - !!omap
    - id: __iPKB_Clostridiaceae__2hxmp_DUP1_c
    - name: ''
    - compartment: C_c
    - charge: 0.0
    - formula: C7H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H8O2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2hxmp_DUP1_c:0
      - biocyc: META:CPD-173
      - chebi:
        - CHEBI:15059
        - CHEBI:16464
        - CHEBI:26592
        - CHEBI:9004
        - CHEBI:974
      - hmdb: HMDB59709
      - inchikey: CQRYARSYNCAZFO-UHFFFAOYSA-N
      - kegg.compound: C02323
      - kegg.drug: D05790
      - metanetx.chemical: MNXM1855
      - sbo: SBO:0000247
      - seed.compound: cpd01553
  - !!omap
    - id: 2ins_c
    - name: 2-deoxy-D-gluc-5-ulosonic acid
    - compartment: C_c
    - charge: 0.0
    - formula: C6H10O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H10O6
    - annotation: !!omap
      - biggr: 2ins_c:0
      - biocyc: META:CPD-14808
      - chebi:
        - CHEBI:27972
      - inchikey: VYEGBDHSGHXOGT-HYFGLKJPSA-N
      - kegg.compound: C00691
      - metanetx.chemical: MNXM676
      - sbo: SBO:0000247
      - seed.compound: cpd00524
  - !!omap
    - id: 2ippm_c
    - name: 2-isopropylmaleate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H8O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H8O4
    - annotation: !!omap
      - biggr: 2ippm_c:-2
      - biocyc: META:CPD-9451
      - chebi:
        - CHEBI:58085
      - hmdb: HMDB12241
      - inchikey: NJMGRJLQRLFQQX-HYXAFXHYSA-L
      - kegg.compound: C02631
      - metanetx.chemical: MNXM1706
      - sbo: SBO:0000247
      - seed.compound: cpd01710
  - !!omap
    - id: __iPKB_Clostridiaceae__2maacoa_c
    - name: 2-Methyl-3-acetoacetyl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C26H38N7O18P3S
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C26H38N7O18P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2maacoa_c:0
      - biocyc: META:2-METHYL-ACETO-ACETYL-COA
      - chebi:
        - CHEBI:11613
        - CHEBI:1195
        - CHEBI:15476
        - CHEBI:19687
        - CHEBI:57335
      - hmdb: HMDB01157
      - inchikey: NHNODHRSCRALBF-NQNBQJKNSA-J
      - kegg.compound: C03344
      - lipidmaps: LMFA07050189
      - metanetx.chemical: MNXM524
      - reactome: R-ALL-70836
      - sbo: SBO:0000247
      - seed.compound: cpd02124
  - !!omap
    - id: 2mahmp_c
    - name: 4-amino-2-methyl-5-diphosphonatooxymethylpyrimidine(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C6H8N3O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H8N3O7P2
    - annotation: !!omap
      - biggr: 2mahmp_c:-3
      - biocyc: META:AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP
      - chebi:
        - CHEBI:57841
      - inchikey: AGQJQCFEPUVXNK-UHFFFAOYSA-K
      - kegg.compound: C04752
      - metanetx.chemical: MNXM1135
      - sbo: SBO:0000247
      - seed.compound: cpd02894
  - !!omap
    - id: 2mb2coa_c
    - name: 2-methylcrotonoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C26H38N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C26H38N7O17P3S
    - annotation: !!omap
      - biggr: 2mb2coa_c:-4
      - biocyc: META:CPD-1083
      - chebi:
        - CHEBI:57337
      - hmdb:
        - HMDB00993
        - HMDB02054
        - HMDB02371
        - HMDB06871
        - HMDB62753
      - inchikey: PMWATMXOQQZNBX-DKBZLLMOSA-J
      - kegg.compound: C03345
      - lipidmaps:
        - LMFA07050191
        - LMFA07050374
      - metanetx.chemical: MNXM609
      - reactome: R-ALL-70799
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02125
        - cpd29594
  - !!omap
    - id: __iPKB_Clostridiaceae__2me4p_c
    - name: 2-C-methyl-D-erythritol 4-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11O7P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C5H11O7P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2me4p_c:0
      - biocyc: META:2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE
      - chebi:
        - CHEBI:1030
        - CHEBI:11483
        - CHEBI:17764
        - CHEBI:58262
      - inchikey: XMWHRVNVKDKBRG-UHNVWZDZSA-L
      - kegg.compound: C11434
      - metanetx.chemical: MNXM1626
      - sbo: SBO:0000247
      - seed.compound: cpd08286
  - !!omap
    - id: 2mecdp_c
    - name: 2-C-methyl-D-erythritol 2,4-cyclic diphosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H10O9P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H10O9P2
    - annotation: !!omap
      - biggr: 2mecdp_c:-2
      - biocyc: META:2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE
      - chebi:
        - CHEBI:58483
      - inchikey: SFRQRNJMIIUYDI-UHNVWZDZSA-L
      - kegg.compound: C11453
      - metanetx.chemical: MNXM1168
      - sbo: SBO:0000247
      - seed.compound: cpd08301
  - !!omap
    - id: 2obut_c
    - name: 2-oxobutanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C4H5O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H5O3
    - annotation: !!omap
      - biggr: 2obut_c:-1
      - biocyc: META:2-OXOBUTANOATE
      - chebi:
        - CHEBI:16763
      - hmdb:
        - HMDB00005
        - HMDB06544
      - inchikey: TYEYBOSBBBHJIV-UHFFFAOYSA-M
      - kegg.compound: C00109
      - lipidmaps: LMFA01060002
      - metanetx.chemical: MNXM159
      - reactome: R-ALL-936714
      - sbo: SBO:0000247
      - seed.compound: cpd00094
  - !!omap
    - id: 2p4c2me_c
    - name: 4-CDP-2-C-methyl-D-erythritol 2-phosphate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C14H22N3O17P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C14H22N3O17P3
    - annotation: !!omap
      - biggr: 2p4c2me_c:-4
      - biocyc: META:2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET
      - chebi:
        - CHEBI:57919
      - inchikey: HTJXTKBIUVFUAR-XHIBXCGHSA-J
      - kegg.compound: C11436
      - metanetx.chemical: MNXM1641
      - sbo: SBO:0000247
      - seed.compound: cpd08288
  - !!omap
    - id: 2pg_c
    - name: 2-phosphonato-D-glycerate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C3H4O7P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C3H4O7P
    - annotation: !!omap
      - biggr: 2pg_c:-3
      - biocyc: META:2-PG
      - chebi:
        - CHEBI:58289
      - hmdb:
        - HMDB00362
        - HMDB03391
        - HMDB62707
      - inchikey: GXIURPTVHJPJLF-UWTATZPHSA-K
      - kegg.compound: C00631
      - metanetx.chemical: MNXM275
      - reactome: R-ALL-30485
      - sbo: SBO:0000247
      - seed.compound: cpd00482
  - !!omap
    - id: 2pglyc_c
    - name: 2-phosphonatoglycolate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C2H2O6P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C2H2O6P
    - annotation: !!omap
      - biggr: 2pglyc_c:-3
      - biocyc: META:CPD-67
      - chebi:
        - CHEBI:58033
      - hmdb:
        - HMDB00816
        - HMDB60148
      - inchikey: ASCFNMCAHFUBCO-UHFFFAOYSA-K
      - kegg.compound: C00988
      - metanetx.chemical: MNXM2074
      - sbo: SBO:0000247
      - seed.compound: cpd00727
  - !!omap
    - id: 2pglyc_e
    - name: 2-phosphonatoglycolate(3-)
    - compartment: C_e
    - charge: -3.0
    - formula: C2H2O6P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C2H2O6P
    - annotation: !!omap
      - biggr: 2pglyc_e:-3
      - biocyc: META:CPD-67
      - chebi:
        - CHEBI:58033
      - hmdb:
        - HMDB00816
        - HMDB60148
      - inchikey: ASCFNMCAHFUBCO-UHFFFAOYSA-K
      - kegg.compound: C00988
      - metanetx.chemical: MNXM2074
      - sbo: SBO:0000247
      - seed.compound: cpd00727
  - !!omap
    - id: 34hpp_c
    - name: 3-(4-hydroxyphenyl)pyruvate
    - compartment: C_c
    - charge: -1.0
    - formula: C9H7O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C9H7O4
    - annotation: !!omap
      - biggr: 34hpp_c:-1
      - biocyc: META:P-HYDROXY-PHENYLPYRUVATE
      - chebi:
        - CHEBI:36242
      - hmdb: HMDB00707
      - inchikey: KKADPXVIOXHVKN-UHFFFAOYSA-M
      - kegg.compound: C01179
      - metanetx.chemical: MNXM153
      - reactome: R-ALL-31365
      - sbo: SBO:0000247
      - seed.compound: cpd00868
  - !!omap
    - id: 35cgmp_c
    - name: 3',5'-cyclic GMP(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C10H11N5O7P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H11N5O7P
    - annotation: !!omap
      - biggr: 35cgmp_c:-1
      - biocyc: META:CGMP
      - chebi:
        - CHEBI:57746
      - hmdb: HMDB01314
      - inchikey: ZOOGRGPOEVQQDX-UUOKFMHZSA-M
      - kegg.compound: C00942
      - metanetx.chemical: MNXM665
      - sbo: SBO:0000247
      - seed.compound: cpd00697
  - !!omap
    - id: 3c2hmp_c
    - name: (2R,3S)-3-isopropylmalate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H10O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H10O5
    - annotation: !!omap
      - biggr: 3c2hmp_c:-2
      - biocyc: META:2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE
      - chebi:
        - CHEBI:35121
      - hmdb: HMDB12156
      - inchikey: RNQHMTFBUSSBJQ-CRCLSJGQSA-L
      - kegg.compound: C04411
      - metanetx.chemical: MNXM891
      - sbo: SBO:0000247
      - seed.compound: cpd02693
  - !!omap
    - id: 3c3hmp_c
    - name: (2S)-2-isopropylmalate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H10O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H10O5
    - annotation: !!omap
      - biggr: 3c3hmp_c:-2
      - biocyc: META:3-CARBOXY-3-HYDROXY-ISOCAPROATE
      - chebi:
        - CHEBI:1178
      - hmdb: HMDB00402
      - inchikey: BITYXLXUCSKTJS-ZETCQYMHSA-L
      - kegg.compound: C02504
      - lipidmaps: LMFA01170083
      - metanetx.chemical: MNXM985
      - sbo: SBO:0000247
      - seed.compound: cpd01646
  - !!omap
    - id: 3c4mop_c
    - name: (2S)-2-isopropyl-3-oxosuccinate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H8O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H8O5
    - annotation: !!omap
      - biggr: 3c4mop_c:-2
      - biocyc: META:CPD-7100
      - chebi:
        - CHEBI:17214
      - hmdb: HMDB12149
      - inchikey: HIIZAGQWABAMRR-BYPYZUCNSA-L
      - kegg.compound: C04236
      - metanetx.chemical: MNXM1602
      - sbo: SBO:0000247
      - seed.compound: cpd02605
  - !!omap
    - id: 3dhgulnp_c
    - name: 3-dehydro-L-gulonate 6-phosphate
    - compartment: C_c
    - charge: -3.0
    - formula: C6H8O10P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H8O10P
    - annotation: !!omap
      - biggr: 3dhgulnp_c:-3
      - biocyc: META:CPD-2343
      - chebi:
        - CHEBI:58774
      - inchikey: BDUIIKXSXFDPEC-LWKDLAHASA-K
      - kegg.compound: C14899
      - metanetx.chemical: MNXM1170
      - sbo: SBO:0000247
      - seed.compound: cpd10596
  - !!omap
    - id: 3dhq_c
    - name: 3-dehydroquinate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H9O6
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H9O6
    - annotation: !!omap
      - biggr: 3dhq_c:-1
      - biocyc: META:DEHYDROQUINATE
      - chebi:
        - CHEBI:32364
      - hmdb: HMDB12710
      - inchikey: WVMWZWGZRAXUBK-SYTVJDICSA-M
      - kegg.compound: C00944
      - metanetx.chemical: MNXM478
      - reactome: R-ALL-964921
      - sbo: SBO:0000247
      - seed.compound: cpd00699
  - !!omap
    - id: 3dhsk_c
    - name: 3-dehydroshikimate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H7O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H7O5
    - annotation: !!omap
      - biggr: 3dhsk_c:-1
      - biocyc: META:3-DEHYDRO-SHIKIMATE
      - chebi:
        - CHEBI:16630
      - inchikey: SLWWJZMPHJJOPH-PHDIDXHHSA-M
      - kegg.compound: C02637
      - metanetx.chemical: MNXM611
      - reactome: R-ALL-964941
      - sbo: SBO:0000247
      - seed.compound: cpd01716
  - !!omap
    - id: __iPKB_Clostridiaceae__3hbcoa__R_c
    - name: (R)-3-Hydroxybutyryl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C25H38N7O18P3S
    - notes: !!omap
      - FORMULA: C25H38N7O18P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__3hbcoa__R_c:0
      - metanetx.chemical: MNXM162788
      - sbo: SBO:0000247
  - !!omap
    - id: 3hbcoa_c
    - name: (S)-3-hydroxybutanoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C25H38N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C25H38N7O18P3S
    - annotation: !!omap
      - biggr: 3hbcoa_c:-4
      - biocyc: META:S-3-HYDROXYBUTANOYL-COA
      - chebi:
        - CHEBI:57316
      - hmdb: HMDB62259
      - inchikey: QHHKKMYHDBRONY-VKBDFPRVSA-J
      - kegg.compound: C01144
      - lipidmaps: LMFA07050153
      - metanetx.chemical: MNXM446
      - reactome: R-ALL-77251
      - sbo: SBO:0000247
      - seed.compound: cpd00842
  - !!omap
    - id: 3hhdcoa_c
    - name: (S)-3-hydroxypalmitoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C37H62N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C37H62N7O18P3S
    - annotation: !!omap
      - biggr: 3hhdcoa_c:-4
      - biocyc: META:CPD0-2232
      - chebi:
        - CHEBI:62613
      - hmdb: HMDB03932
      - inchikey: DEHLMTDDPWDRDR-BCIKBWLNSA-J
      - kegg.compound: C05258
      - lipidmaps: LMFA07050161
      - metanetx.chemical: MNXM825
      - reactome: R-ALL-77300
      - sbo: SBO:0000247
      - seed.compound: cpd03113
  - !!omap
    - id: 3hmbcoa_c
    - name: (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C26H40N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C26H40N7O18P3S
    - annotation: !!omap
      - biggr: 3hmbcoa_c:-4
      - biocyc: META:2-METHYL-3-HYDROXY-BUTYRYL-COA
      - chebi:
        - CHEBI:57312
      - hmdb:
        - HMDB01356
        - HMDB02029
      - inchikey: PEKYNTFSOBAABV-LQUDNSJZSA-J
      - kegg.compound: C04405
      - lipidmaps:
        - LMFA07050109
        - LMFA07050188
      - metanetx.chemical: MNXM701
      - sbo: SBO:0000247
      - seed.compound: cpd02691
  - !!omap
    - id: 3hmop_c
    - name: (R)-3-hydroxy-3-methyl-2-oxopentanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H9O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H9O4
    - annotation: !!omap
      - biggr: 3hmop_c:-1
      - biocyc: META:CPD-15104
      - chebi:
        - CHEBI:49257
      - inchikey: YJVOWRAWFXRESP-ZCFIWIBFSA-M
      - kegg.compound: C14463
      - lipidmaps: LMFA01050457
      - metanetx.chemical: MNXM114594
      - sbo: SBO:0000247
      - seed.compound: cpd10162
  - !!omap
    - id: 3hppnl_c
    - name: 3-hydroxypropanal
    - compartment: C_c
    - charge: 0.0
    - formula: C3H6O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H6O2
    - annotation: !!omap
      - biggr: 3hppnl_c:0
      - biocyc: META:HYDROXYPROPANAL
      - chebi:
        - CHEBI:17871
      - hmdb: HMDB03453
      - inchikey: AKXKFZDCRYJKTF-UHFFFAOYSA-N
      - kegg.compound: C00969
      - metanetx.chemical: MNXM1526
      - sbo: SBO:0000247
      - seed.compound: cpd00714
  - !!omap
    - id: 3ig3p_c
    - name: (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C11H12NO6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C11H12NO6P
    - annotation: !!omap
      - biggr: 3ig3p_c:-2
      - biocyc: META:INDOLE-3-GLYCEROL-P
      - chebi:
        - CHEBI:58866
      - inchikey: NQEQTYPJSIEPHW-MNOVXSKESA-L
      - kegg.compound: C03506
      - metanetx.chemical: MNXM866
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02210
        - cpd29667
  - !!omap
    - id: 3mob_c
    - name: 3-methyl-2-oxobutanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H7O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H7O3
    - annotation: !!omap
      - biggr: 3mob_c:-1
      - biocyc: META:2-KETO-ISOVALERATE
      - chebi:
        - CHEBI:11851
      - hmdb:
        - HMDB00019
        - HMDB04260
      - inchikey: QHKABHOOEWYVLI-UHFFFAOYSA-M
      - kegg.compound: C00141
      - lipidmaps: LMFA01020274
      - metanetx.chemical: MNXM238
      - sbo: SBO:0000247
      - seed.compound: cpd00123
  - !!omap
    - id: 3mop_c
    - name: (S)-3-methyl-2-oxovalerate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H9O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H9O3
    - annotation: !!omap
      - biggr: 3mop_c:-1
      - biocyc: META:2-KETO-3-METHYL-VALERATE
      - chebi:
        - CHEBI:35146
      - inchikey: JVQYSWDUAOAHFM-BYPYZUCNSA-M
      - kegg.compound: C00671
      - lipidmaps: LMFA01020275
      - metanetx.chemical: MNXM439
      - sbo: SBO:0000247
      - seed.compound: cpd00508
  - !!omap
    - id: 3oddcoa_c
    - name: 3-oxolauroyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C33H52N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C33H52N7O18P3S
    - annotation: !!omap
      - biggr: 3oddcoa_c:-4
      - biocyc: META:CPD0-2105
      - chebi:
        - CHEBI:62615
      - hmdb:
        - HMDB03937
        - HMDB06350
        - HMDB62368
      - inchikey: HQANBZHVWIDNQZ-GMHMEAMDSA-J
      - kegg.compound: C05263
      - lipidmaps:
        - LMFA07050013
        - LMFA07050247
      - metanetx.chemical: MNXM705
      - reactome: R-ALL-77253
      - sbo: SBO:0000247
      - seed.compound: cpd03117
  - !!omap
    - id: 3ohdcoa_c
    - name: 3-oxopalmitoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C37H60N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C37H60N7O18P3S
    - annotation: !!omap
      - biggr: 3ohdcoa_c:-4
      - biocyc: META:3-OXOPALMITOYL-COA
      - chebi:
        - CHEBI:57349
      - hmdb: HMDB06402
      - inchikey: NQMPLXPCRJOSHL-BBECNAHFSA-J
      - kegg.compound: C05259
      - lipidmaps: LMFA07050250
      - metanetx.chemical: MNXM738
      - reactome: R-ALL-77302
      - sbo: SBO:0000247
      - seed.compound: cpd03114
  - !!omap
    - id: 3pg_c
    - name: 3-phosphonato-D-glycerate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C3H4O7P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C3H4O7P
    - annotation: !!omap
      - biggr: 3pg_c:-3
      - biocyc: META:G3P
      - chebi:
        - CHEBI:58272
      - hmdb: HMDB60180
      - inchikey: OSJPPGNTCRNQQC-UWTATZPHSA-K
      - kegg.compound: C00197
      - metanetx.chemical: MNXM126
      - reactome:
        - R-ALL-29728
        - R-ALL-6799493
      - sbo: SBO:0000247
      - seed.compound: cpd00169
  - !!omap
    - id: 3php_c
    - name: 3-phosphonatooxypyruvate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C3H2O7P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C3H2O7P
    - annotation: !!omap
      - biggr: 3php_c:-3
      - biocyc: META:3-P-HYDROXYPYRUVATE
      - chebi:
        - CHEBI:18110
      - hmdb:
        - HMDB01024
        - HMDB60175
      - inchikey: LFLUCDOSQPJJBE-UHFFFAOYSA-K
      - kegg.compound: C03232
      - metanetx.chemical: MNXM541
      - reactome: R-ALL-977329
      - sbo: SBO:0000247
      - seed.compound: cpd02069
  - !!omap
    - id: 3psme_c
    - name: 5-O-(1-carboxylatovinyl)-3-phosphonatoshikimate
    - compartment: C_c
    - charge: -4.0
    - formula: C10H9O10P
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H9O10P
    - annotation: !!omap
      - biggr: 3psme_c:-4
      - biocyc: META:3-ENOLPYRUVYL-SHIKIMATE-5P
      - chebi:
        - CHEBI:57701
      - inchikey: QUTYKIXIUDQOLK-PRJMDXOYSA-J
      - kegg.compound: C01269
      - metanetx.chemical: MNXM1365
      - reactome: R-ALL-964900
      - sbo: SBO:0000247
      - seed.compound: cpd00932
  - !!omap
    - id: 4abut_c
    - name: gamma-aminobutyric acid
    - compartment: C_c
    - charge: 0.0
    - formula: C4H9NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO2
    - annotation: !!omap
      - biggr: 4abut_c:0
      - biocyc: META:4-AMINO-BUTYRATE
      - chebi:
        - CHEBI:59888
        - CHEBI:16865
      - hmdb: HMDB00112
      - inchikey: BTCSSZJGUNDROE-UHFFFAOYSA-N
      - kegg.compound: C00334
      - kegg.drug: D00058
      - lipidmaps: LMFA01100039
      - metanetx.chemical: MNXM192
      - reactome:
        - R-ALL-352003
        - R-ALL-352011
        - R-ALL-428571
        - R-ALL-916850
      - sbo: SBO:0000247
      - seed.compound: cpd00281
  - !!omap
    - id: 4abut_e
    - name: gamma-aminobutyric acid
    - compartment: C_e
    - charge: 0.0
    - formula: C4H9NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO2
    - annotation: !!omap
      - biggr: 4abut_e:0
      - biocyc: META:4-AMINO-BUTYRATE
      - chebi:
        - CHEBI:59888
        - CHEBI:16865
      - hmdb: HMDB00112
      - inchikey: BTCSSZJGUNDROE-UHFFFAOYSA-N
      - kegg.compound: C00334
      - kegg.drug: D00058
      - lipidmaps: LMFA01100039
      - metanetx.chemical: MNXM192
      - reactome:
        - R-ALL-352003
        - R-ALL-352011
        - R-ALL-428571
        - R-ALL-916850
      - sbo: SBO:0000247
      - seed.compound: cpd00281
  - !!omap
    - id: 4abutn_c
    - name: 4-ammoniobutanal
    - compartment: C_c
    - charge: 1.0
    - formula: C4H10NO
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C4H10NO
    - annotation: !!omap
      - biggr: 4abutn_c:1
      - biocyc: META:4-AMINO-BUTYRALDEHYDE
      - chebi:
        - CHEBI:58264
      - hmdb:
        - HMDB01080
        - HMDB60247
      - inchikey: DZQLQEYLEYWJIB-UHFFFAOYSA-O
      - kegg.compound: C00555
      - metanetx.chemical: MNXM422
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00434
        - cpd12219
  - !!omap
    - id: 4abutn_e
    - name: 4-ammoniobutanal
    - compartment: C_e
    - charge: 1.0
    - formula: C4H10NO
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C4H10NO
    - annotation: !!omap
      - biggr: 4abutn_e:1
      - biocyc: META:4-AMINO-BUTYRALDEHYDE
      - chebi:
        - CHEBI:58264
      - hmdb:
        - HMDB01080
        - HMDB60247
      - inchikey: DZQLQEYLEYWJIB-UHFFFAOYSA-O
      - kegg.compound: C00555
      - metanetx.chemical: MNXM422
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00434
        - cpd12219
  - !!omap
    - id: 4abz_c
    - name: 4-aminobenzoate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H6NO2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H6NO2
    - annotation: !!omap
      - biggr: 4abz_c:-1
      - biocyc: META:P-AMINO-BENZOATE
      - chebi:
        - CHEBI:17836
      - hmdb: HMDB01392
      - inchikey: ALYNCZNDIQEVRV-UHFFFAOYSA-M
      - kegg.compound: C00568
      - kegg.drug: D02456
      - metanetx.chemical: MNXM421
      - sbo: SBO:0000247
      - seed.compound: cpd00443
  - !!omap
    - id: 4adcho_c
    - name: 4-amino-4-deoxychorismate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C10H10NO5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H10NO5
    - annotation: !!omap
      - biggr: 4adcho_c:-1
      - biocyc: META:4-AMINO-4-DEOXYCHORISMATE
      - chebi:
        - CHEBI:58406
      - inchikey: OIUJHGOLFKDBSU-HTQZYQBOSA-M
      - kegg.compound: C11355
      - metanetx.chemical: MNXM1458
      - sbo: SBO:0000247
      - seed.compound: cpd08210
  - !!omap
    - id: 4ahmmp_c
    - name: 4-amino-5-hydroxymethyl-2-methylpyrimidine
    - compartment: C_c
    - charge: 0.0
    - formula: C6H9N3O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H9N3O
    - annotation: !!omap
      - biggr: 4ahmmp_c:0
      - biocyc: META:HMP
      - chebi:
        - CHEBI:16892
      - inchikey: VUTBELPREDJDDH-UHFFFAOYSA-N
      - kegg.compound: C01279
      - metanetx.chemical: MNXM874
      - sbo: SBO:0000247
      - seed.compound: cpd00939
  - !!omap
    - id: 4ampm_c
    - name: 4-amino-2-methyl-5-phosphonatooxymethylpyrimidine(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H8N3O4P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H8N3O4P
    - annotation: !!omap
      - biggr: 4ampm_c:-2
      - chebi:
        - CHEBI:58354
      - inchikey: SSWDVESQMBHOQT-UHFFFAOYSA-N
      - metanetx.chemical: MNXM31161
      - sbo: SBO:0000247
      - seed.compound: cpd02775
  - !!omap
    - id: 4c2me_c
    - name: 4-CDP-2-C-methyl-D-erythritol(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C14H23N3O14P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C14H23N3O14P2
    - annotation: !!omap
      - biggr: 4c2me_c:-2
      - biocyc: META:4-CYTIDINE-5-DIPHOSPHO-2-C
      - chebi:
        - CHEBI:57823
      - inchikey: YFAUKWZNPVBCFF-XHIBXCGHSA-L
      - kegg.compound: C11435
      - metanetx.chemical: MNXM1642
      - sbo: SBO:0000247
      - seed.compound: cpd08287
  - !!omap
    - id: 4hba_c
    - name: p-hydroxybenzyl alcohol
    - compartment: C_c
    - charge: 0.0
    - formula: C7H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H8O2
    - annotation: !!omap
      - biggr: 4hba_c:0
      - biocyc: META:4-HYDROXY-BENZYL-ALCOHOL
      - chebi:
        - CHEBI:67410
      - hmdb: HMDB11724
      - inchikey: BVJSUAQZOZWCKN-UHFFFAOYSA-N
      - kegg.compound: C17467
      - metanetx.chemical: MNXM107505
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15378
        - cpd17595
  - !!omap
    - id: 4hba_e
    - name: p-hydroxybenzyl alcohol
    - compartment: C_e
    - charge: 0.0
    - formula: C7H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H8O2
    - annotation: !!omap
      - biggr: 4hba_e:0
      - biocyc: META:4-HYDROXY-BENZYL-ALCOHOL
      - chebi:
        - CHEBI:67410
      - hmdb: HMDB11724
      - inchikey: BVJSUAQZOZWCKN-UHFFFAOYSA-N
      - kegg.compound: C17467
      - metanetx.chemical: MNXM107505
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15378
        - cpd17595
  - !!omap
    - id: 4hoxpacd_c
    - name: (4-hydroxyphenyl)acetaldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C8H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C8H8O2
    - annotation: !!omap
      - biggr: 4hoxpacd_c:0
      - biocyc: META:HYDRPHENYLAC-CPD
      - chebi:
        - CHEBI:15621
      - hmdb: HMDB03767
      - inchikey: IPRPPFIAVHPVJH-UHFFFAOYSA-N
      - kegg.compound: C03765
      - metanetx.chemical: MNXM479
      - reactome:
        - R-ALL-500608
        - R-ALL-5696178
      - sbo: SBO:0000247
      - seed.compound: cpd02361
  - !!omap
    - id: 4hphac_c
    - name: 4-hydroxyphenylacetate
    - compartment: C_c
    - charge: -1.0
    - formula: C8H7O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C8H7O3
    - annotation: !!omap
      - biggr: 4hphac_c:-1
      - chebi:
        - CHEBI:48999
      - hmdb: HMDB60390
      - inchikey: HBMCQTHGYMTCOF-UHFFFAOYSA-N
      - kegg.compound: C13636
      - metanetx.chemical: MNXM3863
      - sbo: SBO:0000247
      - seed.compound: cpd19151
  - !!omap
    - id: 4hpro_LT_c
    - name: trans-4-hydroxy-L-proline zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO3
    - annotation: !!omap
      - biggr: 4hpro_LT_c:0
      - biocyc:
        - META:4-HYDROXY-L-PROLINE
        - META:CPD-17742
      - chebi:
        - CHEBI:58375
        - CHEBI:18095
      - hmdb:
        - HMDB00725
        - HMDB36576
      - inchikey: PMMYEEVYMWASQN-DMTCNVIQSA-N
      - kegg.compound:
        - C01157
        - C03651
      - metanetx.chemical: MNXM87584
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00851
        - cpd02291
        - cpd29317
  - !!omap
    - id: 4hthr_c
    - name: 4-hydroxy-L-threonine
    - compartment: C_c
    - charge: 0.0
    - formula: C4H9NO4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO4
    - annotation: !!omap
      - biggr: 4hthr_c:0
      - biocyc: META:CPD0-2189
      - chebi:
        - CHEBI:60904
        - CHEBI:28330
      - inchikey: JBNUARFQOCGDRK-GBXIJSLDSA-N
      - kegg.compound: C06056
      - metanetx.chemical: MNXM1802
      - sbo: SBO:0000247
      - seed.compound: cpd03608
  - !!omap
    - id: 4mhetz_c
    - name: 5-(2-hydroxyethyl)-4-methylthiazole
    - compartment: C_c
    - charge: 0.0
    - formula: C6H9NOS
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H9NOS
    - annotation: !!omap
      - biggr: 4mhetz_c:0
      - biocyc: META:THZ
      - chebi:
        - CHEBI:17957
      - hmdb: HMDB32985
      - inchikey: BKAWJIRCKVUVED-UHFFFAOYSA-N
      - kegg.compound: C04294
      - metanetx.chemical: MNXM962
      - sbo: SBO:0000247
      - seed.compound: cpd02636
  - !!omap
    - id: 4mop_c
    - name: 4-methyl-2-oxopentanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H9O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H9O3
    - annotation: !!omap
      - biggr: 4mop_c:-1
      - biocyc: META:2K-4CH3-PENTANOATE
      - chebi:
        - CHEBI:17865
      - hmdb:
        - HMDB00695
        - HMDB00762
      - inchikey: BKAJNAXTPSGJCU-UHFFFAOYSA-M
      - kegg.compound: C00233
      - metanetx.chemical: MNXM404
      - sbo: SBO:0000247
      - seed.compound: cpd00200
  - !!omap
    - id: 4mpetz_c
    - name: 4-methyl-5-(2-phosphonatooxyethyl)thiazole(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H8NO4PS
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H8NO4PS
    - annotation: !!omap
      - biggr: 4mpetz_c:-2
      - biocyc: META:THZ-P
      - chebi:
        - CHEBI:58296
      - inchikey: OCYMERZCMYJQQO-UHFFFAOYSA-L
      - kegg.compound: C04327
      - metanetx.chemical: MNXM960
      - sbo: SBO:0000247
      - seed.compound: cpd02654
  - !!omap
    - id: 4pasp_c
    - name: 4-phosphonato-L-aspartic acid(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H6NO7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H6NO7P
    - annotation: !!omap
      - biggr: 4pasp_c:-2
      - biocyc: META:L-BETA-ASPARTYL-P
      - chebi:
        - CHEBI:57535
      - hmdb: HMDB12250
      - inchikey: IXZNKTPIYKDIGG-REOHCLBHSA-L
      - kegg.compound: C03082
      - metanetx.chemical: MNXM1177
      - sbo: SBO:0000247
      - seed.compound: cpd01977
  - !!omap
    - id: 4per_c
    - name: 4-O-phosphonato-D-erythronate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C4H6O8P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C4H6O8P
    - annotation: !!omap
      - biggr: 4per_c:-3
      - biocyc: META:ERYTHRONATE-4P
      - chebi:
        - CHEBI:58766
      - inchikey: ZCZXOHUILRHRQJ-PWNYCUMCSA-K
      - kegg.compound: C03393
      - metanetx.chemical: MNXM1407
      - sbo: SBO:0000247
      - seed.compound: cpd02147
  - !!omap
    - id: 4ppan_c
    - name: (R)-4'-phosphonatopantothenate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C9H15NO8P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C9H15NO8P
    - annotation: !!omap
      - biggr: 4ppan_c:-3
      - biocyc: META:4-P-PANTOTHENATE
      - chebi:
        - CHEBI:10986
      - hmdb:
        - HMDB01016
        - HMDB62700
      - inchikey: XHFVGHPGDLDEQO-ZETCQYMHSA-K
      - kegg.compound: C03492
      - metanetx.chemical: MNXM415
      - reactome: R-ALL-196786
      - sbo: SBO:0000247
      - seed.compound: cpd02201
  - !!omap
    - id: 4ppcys_c
    - name: N-[(R)-4-phosphonatopantothenoyl]-L-cysteinate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C12H20N2O9PS
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C12H20N2O9PS
    - annotation: !!omap
      - biggr: 4ppcys_c:-3
      - biocyc: META:R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE
      - chebi:
        - CHEBI:59458
      - hmdb: HMDB01117
      - inchikey: XQYALQVLCNHCFT-CBAPKCEASA-K
      - kegg.compound: C04352
      - metanetx.chemical: MNXM483
      - reactome: R-ALL-196834
      - sbo: SBO:0000247
      - seed.compound: cpd02666
  - !!omap
    - id: 4r5au_c
    - name: 5-amino-6-(D-ribitylamino)uracil
    - compartment: C_c
    - charge: 0.0
    - formula: C9H16N4O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H16N4O6
    - annotation: !!omap
      - biggr: 4r5au_c:0
      - biocyc: META:AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE
      - chebi:
        - CHEBI:15934
      - inchikey: XKQZIXVJVUPORE-RPDRRWSUSA-N
      - kegg.compound: C04732
      - metanetx.chemical: MNXM791
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02882
        - cpd29668
  - !!omap
    - id: 56dura_c
    - name: 5,6-dihydrouracil
    - compartment: C_c
    - charge: 0.0
    - formula: C4H6N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H6N2O2
    - annotation: !!omap
      - biggr: 56dura_c:0
      - biocyc: META:DI-H-URACIL
      - chebi:
        - CHEBI:15901
      - hmdb: HMDB00076
      - inchikey: OIVLITBTBDPEFK-UHFFFAOYSA-N
      - kegg.compound: C00429
      - metanetx.chemical: MNXM506
      - reactome: R-ALL-73584
      - sbo: SBO:0000247
      - seed.compound: cpd00337
  - !!omap
    - id: __iPKB_Clostridiaceae__5aizc_c
    - name: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
    - compartment: C_c
    - charge: 0.0
    - formula: C9H11N3O9P
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C9H11N3O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__5aizc_c:0
      - biocyc: META:PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE
      - chebi:
        - CHEBI:12103
        - CHEBI:18968
        - CHEBI:28413
        - CHEBI:41336
        - CHEBI:575
        - CHEBI:58564
        - CHEBI:77657
      - hmdb:
        - HMDB06273
        - HMDB62424
      - inchikey: XFVULMDJZXYMSG-ZIYNGMLESA-L
      - kegg.compound: C04751
      - metanetx.chemical: MNXM507
      - reactome: R-ALL-111395
      - sbo: SBO:0000247
      - seed.compound: cpd02893
  - !!omap
    - id: 5aop_c
    - name: 5-aminolevulinic acid
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO3
    - annotation: !!omap
      - biggr: 5aop_c:0
      - biocyc: META:5-AMINO-LEVULINATE
      - chebi:
        - CHEBI:356416
        - CHEBI:17549
      - hmdb: HMDB01149
      - inchikey: ZGXJTSGNIOSYLO-UHFFFAOYSA-N
      - kegg.compound: C00430
      - kegg.drug: D07567
      - lipidmaps: LMFA01100055
      - metanetx.chemical: MNXM405
      - reactome:
        - R-ALL-189466
        - R-ALL-189489
      - sbo: SBO:0000247
      - seed.compound: cpd00338
  - !!omap
    - id: 5aprbu_c
    - name: 5-amino-6-(5-phosphoribitylamino)uracil(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H15N4O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H15N4O9P
    - annotation: !!omap
      - biggr: 5aprbu_c:-2
      - biocyc: META:CPD-1086
      - chebi:
        - CHEBI:58421
      - hmdb: HMDB03841
      - inchikey: RQRINYISXYAZKL-RPDRRWSUSA-L
      - kegg.compound: C04454
      - metanetx.chemical: MNXM1178
      - sbo: SBO:0000247
      - seed.compound: cpd02720
  - !!omap
    - id: 5apru_c
    - name: 5-amino-6-(5-phospho-D-ribosylamino)uracil(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H13N4O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H13N4O9P
    - annotation: !!omap
      - biggr: 5apru_c:-2
      - biocyc: META:CPD-602
      - chebi:
        - CHEBI:58453
      - inchikey: LZEXYCAGPMYXLX-UMMCILCDSA-L
      - kegg.compound: C01268
      - metanetx.chemical: MNXM1532
      - sbo: SBO:0000247
      - seed.compound: cpd00931
  - !!omap
    - id: 5dglcn_c
    - name: 5-dehydro-D-gluconate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H9O7
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H9O7
    - annotation: !!omap
      - biggr: 5dglcn_c:-1
      - biocyc: META:5-DEHYDROGLUCONATE
      - chebi:
        - CHEBI:58143
      - inchikey: IZSRJDGCGRAUAR-MROZADKFSA-M
      - kegg.compound: C01062
      - metanetx.chemical: MNXM963
      - sbo: SBO:0000247
      - seed.compound: cpd00781
  - !!omap
    - id: 5dglcn_e
    - name: 5-dehydro-D-gluconate
    - compartment: C_e
    - charge: -1.0
    - formula: C6H9O7
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H9O7
    - annotation: !!omap
      - biggr: 5dglcn_e:-1
      - biocyc: META:5-DEHYDROGLUCONATE
      - chebi:
        - CHEBI:58143
      - inchikey: IZSRJDGCGRAUAR-MROZADKFSA-M
      - kegg.compound: C01062
      - metanetx.chemical: MNXM963
      - sbo: SBO:0000247
      - seed.compound: cpd00781
  - !!omap
    - id: 5drib_c
    - name: 5-deoxy-D-ribose
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O4
    - annotation: !!omap
      - biggr: 5drib_c:0
      - biocyc: META:CPD0-2167
      - chebi:
        - CHEBI:62012
      - inchikey: WDRISBUVHBMJEF-MROZADKFSA-N
      - metanetx.chemical: MNXM4391
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15380
        - cpd17002
  - !!omap
    - id: 5drib_e
    - name: 5-deoxy-D-ribose
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O4
    - annotation: !!omap
      - biggr: 5drib_e:0
      - biocyc: META:CPD0-2167
      - chebi:
        - CHEBI:62012
      - inchikey: WDRISBUVHBMJEF-MROZADKFSA-N
      - metanetx.chemical: MNXM4391
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15380
        - cpd17002
  - !!omap
    - id: 5mcsn_c
    - name: 5-methylcytosine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H7N3O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H7N3O
    - annotation: !!omap
      - biggr: 5mcsn_c:0
      - biocyc: META:CPD0-2018
      - chebi:
        - CHEBI:27551
      - hmdb: HMDB02894
      - inchikey: LRSASMSXMSNRBT-UHFFFAOYSA-N
      - kegg.compound: C02376
      - metanetx.chemical: MNXM3509
      - sbo: SBO:0000247
      - seed.compound: cpd01587
  - !!omap
    - id: 5mdr1p_c
    - name: S-methyl-5-thio-alpha-D-ribose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O7PS
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O7PS
    - annotation: !!omap
      - biggr: 5mdr1p_c:-2
      - biocyc: META:CPD-444
      - chebi:
        - CHEBI:58533
      - inchikey: JTFITTQBRJDSTL-KVTDHHQDSA-L
      - kegg.compound: C04188
      - metanetx.chemical: MNXM407
      - reactome: R-ALL-1237165
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02574
        - cpd29669
  - !!omap
    - id: 5mdru1p_c
    - name: S-methyl-5-thio-D-ribulose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O7PS
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O7PS
    - annotation: !!omap
      - biggr: 5mdru1p_c:-2
      - biocyc: META:CPD-1063
      - chebi:
        - CHEBI:58548
      - hmdb:
        - HMDB01299
        - HMDB62647
      - inchikey: CNSJRYUMVMWNMC-RITPCOANSA-L
      - kegg.compound: C04582
      - metanetx.chemical: MNXM522
      - reactome: R-ALL-1237107
      - sbo: SBO:0000247
      - seed.compound: cpd02791
  - !!omap
    - id: 5mdru1p_e
    - name: S-methyl-5-thio-D-ribulose 1-phosphate(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: C6H11O7PS
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O7PS
    - annotation: !!omap
      - biggr: 5mdru1p_e:-2
      - biocyc: META:CPD-1063
      - chebi:
        - CHEBI:58548
      - hmdb:
        - HMDB01299
        - HMDB62647
      - inchikey: CNSJRYUMVMWNMC-RITPCOANSA-L
      - kegg.compound: C04582
      - metanetx.chemical: MNXM522
      - reactome: R-ALL-1237107
      - sbo: SBO:0000247
      - seed.compound: cpd02791
  - !!omap
    - id: 5mta_c
    - name: 5'-S-methyl-5'-thioadenosine
    - compartment: C_c
    - charge: 0.0
    - formula: C11H15N5O3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C11H15N5O3S
    - annotation: !!omap
      - biggr: 5mta_c:0
      - biocyc: META:5-METHYLTHIOADENOSINE
      - chebi:
        - CHEBI:17509
      - hmdb: HMDB01173
      - inchikey: WUUGFSXJNOTRMR-IOSLPCCCSA-N
      - kegg.compound: C00170
      - metanetx.chemical: MNXM150
      - reactome:
        - R-ALL-353106
        - R-ALL-5279412
      - sbo: SBO:0000247
      - seed.compound: cpd00147
  - !!omap
    - id: 5mthf_c
    - name: (6S)-5-methyltetrahydrofolate(1−)
    - compartment: C_c
    - charge: -1.0
    - formula: C20H24N7O6
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C20H24N7O6
    - annotation: !!omap
      - biggr: 5mthf_c:-1
      - biocyc: META:5-METHYL-THF
      - chebi:
        - CHEBI:12146
        - CHEBI:136009
        - CHEBI:15641
        - CHEBI:18608
        - CHEBI:20612
        - CHEBI:2097
      - hmdb: HMDB01396
      - inchikey: ZNOVTXRBGFNYRX-STQMWFEESA-L
      - kegg.compound: C00440
      - kegg.drug: D09353
      - metanetx.chemical: MNXM318
      - reactome:
        - R-ALL-200665
        - R-ALL-200709
      - sbo: SBO:0000247
      - seed.compound: cpd00345
  - !!omap
    - id: 5mtr_c
    - name: S-methyl-5-thio-D-ribofuranose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O4S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O4S
    - annotation: !!omap
      - biggr: 5mtr_c:0
      - biocyc: META:CPD-560
      - chebi:
        - CHEBI:78440
      - inchikey: ACWASDPGAVYCNI-JKUQZMGJSA-N
      - kegg.compound: C03089
      - metanetx.chemical: MNXM1592
      - sbo: SBO:0000247
      - seed.compound: cpd01981
  - !!omap
    - id: 5pg35pg_c
    - name: pGpG(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C20H23N10O15P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C20H23N10O15P2
    - annotation: !!omap
      - biggr: 5pg35pg_c:-3
      - biocyc: META:L-DI-GMP
      - chebi:
        - CHEBI:58754
      - inchikey: ZEHOHLFQOXAZHX-MHARETSRSA-K
      - kegg.compound: C18076
      - metanetx.chemical: MNXM4772
      - sbo: SBO:0000247
      - seed.compound: cpd18057
  - !!omap
    - id: 6pgc_c
    - name: 6-phosphonatooxy-D-gluconate
    - compartment: C_c
    - charge: -3.0
    - formula: C6H10O10P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H10O10P
    - annotation: !!omap
      - biggr: 6pgc_c:-3
      - biocyc: META:CPD-2961
      - chebi:
        - CHEBI:58759
      - hmdb:
        - HMDB01316
        - HMDB62800
      - inchikey: BIRSGZKFKXLSJQ-SQOUGZDYSA-K
      - kegg.compound: C00345
      - metanetx.chemical: MNXM325
      - reactome: R-ALL-29996
      - sbo: SBO:0000247
      - seed.compound: cpd00284
  - !!omap
    - id: __iPKB_Clostridiaceae__6pgg_c
    - name: 6-Phospho-beta-D-glucosyl-(1,4)-D-glucose
    - compartment: C_c
    - charge: 0.0
    - formula: C12H21O14P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C12H21O14P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__6pgg_c:0
      - metanetx.chemical: MNXM147389
      - sbo: SBO:0000247
  - !!omap
    - id: 6pgl_c
    - name: 6-O-phosphonato-D-glucono-1,5-lactone(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H9O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H9O9P
    - annotation: !!omap
      - biggr: 6pgl_c:-2
      - biocyc: META:D-6-P-GLUCONO-DELTA-LACTONE
      - chebi:
        - CHEBI:57955
      - hmdb:
        - HMDB01127
        - HMDB62628
      - inchikey: IJOJIVNDFQSGAB-SQOUGZDYSA-L
      - kegg.compound: C01236
      - metanetx.chemical: MNXM429
      - reactome: R-ALL-31467
      - sbo: SBO:0000247
      - seed.compound: cpd00911
  - !!omap
    - id: LalaDgluMdapDala_c
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine
    - compartment: C_c
    - charge: -1.0
    - formula: C18H30N5O9
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C18H30N5O9
    - annotation: !!omap
      - biggr: LalaDgluMdapDala_c:-1
      - inchikey: BAPAFFOXTCMVCC-UHFFFAOYSA-M
      - metanetx.chemical: MNXM59271
      - sbo: SBO:0000247
      - seed.compound: cpd15387
  - !!omap
    - id: LalaDgluMdapDala_p
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine
    - compartment: C_p
    - charge: -1.0
    - formula: C18H30N5O9
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C18H30N5O9
    - annotation: !!omap
      - biggr: LalaDgluMdapDala_p:-1
      - inchikey: BAPAFFOXTCMVCC-UHFFFAOYSA-M
      - metanetx.chemical: MNXM59271
      - sbo: SBO:0000247
      - seed.compound: cpd15387
  - !!omap
    - id: __iPKB_Clostridiaceae__LalaDgluMdap_c
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate
    - compartment: C_c
    - charge: -1.0
    - formula: C15H25N4O8
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C15H25N4O8
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__LalaDgluMdap_c:-1
      - metanetx.chemical: MNXM90242
      - sbo: SBO:0000247
      - seed.compound: cpd15386
  - !!omap
    - id: __iPKB_Clostridiaceae__LalaDgluMdap_p
    - name: L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate
    - compartment: C_p
    - charge: -1.0
    - formula: C15H25N4O8
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C15H25N4O8
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__LalaDgluMdap_p:-1
      - metanetx.chemical: MNXM90242
      - sbo: SBO:0000247
      - seed.compound: cpd15386
  - !!omap
    - id: LalaLglu_c
    - name: L-alanyl-L-glutamate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C8H13N2O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaLglu_c:-1
      - biocyc: META:CPD0-1445
      - chebi:
        - CHEBI:61396
      - inchikey: VYZAGTDAHUIRQA-WHFBIAKZSA-M
      - kegg.compound: C20958
      - metanetx.chemical: MNXM4026
      - sbo: SBO:0000247
      - seed.compound: cpd15388
  - !!omap
    - id: LalaLglu_e
    - name: L-alanyl-L-glutamate(1-)
    - compartment: C_e
    - charge: -1.0
    - formula: C8H13N2O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaLglu_e:-1
      - biocyc: META:CPD0-1445
      - chebi:
        - CHEBI:61396
      - inchikey: VYZAGTDAHUIRQA-WHFBIAKZSA-M
      - kegg.compound: C20958
      - metanetx.chemical: MNXM4026
      - sbo: SBO:0000247
      - seed.compound: cpd15388
  - !!omap
    - id: LalaLglu_p
    - name: L-alanyl-L-glutamate(1-)
    - compartment: C_p
    - charge: -1.0
    - formula: C8H13N2O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C8H13N2O5
    - annotation: !!omap
      - biggr: LalaLglu_p:-1
      - biocyc: META:CPD0-1445
      - chebi:
        - CHEBI:61396
      - inchikey: VYZAGTDAHUIRQA-WHFBIAKZSA-M
      - kegg.compound: C20958
      - metanetx.chemical: MNXM4026
      - sbo: SBO:0000247
      - seed.compound: cpd15388
  - !!omap
    - id: Largn_c
    - name: L-arogenic acid
    - compartment: C_c
    - charge: 0.0
    - formula: C10H13NO5
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: C10H13NO5
    - annotation: !!omap
      - biggr: Largn_c:0
      - biocyc: META:CPD-659
      - chebi:
        - CHEBI:17530
      - inchikey: MIEILDYWGANZNH-DSQUFTABSA-M
      - kegg.compound: C00826
      - metanetx.chemical: MNXM696
      - sbo: SBO:0000247
      - seed.compound: cpd00616
  - !!omap
    - id: __iPKB_Clostridiaceae__Pald_c
    - name: Phosphonoacetaldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C2H3O4P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C2H3O4P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__Pald_c:0
      - biocyc: META:CPD-551
      - chebi:
        - CHEBI:11653
        - CHEBI:14823
        - CHEBI:18124
        - CHEBI:26070
        - CHEBI:45088
        - CHEBI:58383
        - CHEBI:8155
      - inchikey: YEMKIGUKNDOZEG-UHFFFAOYSA-M
      - kegg.compound: C03167
      - metanetx.chemical: MNXM803
      - sbo: SBO:0000247
      - seed.compound: cpd02024
  - !!omap
    - id: __iPKB_Clostridiaceae__R3hdec4coa_c
    - name: ' 3 Hydroxy 4Z decenoyl CoA'
    - compartment: C_c
    - charge: 0.0
    - formula: C31H48N7O18P3S
    - notes: !!omap
      - FORMULA: C31H48N7O18P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R3hdec4coa_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__R3hdec4e_c
    - name: ' 3 Hydroxy 4Z decenic acid'
    - compartment: C_c
    - charge: 0.0
    - formula: C10H17O3
    - notes: !!omap
      - FORMULA: C10H17O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R3hdec4e_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__R3hdec4e_e
    - name: ' 3 Hydroxy 4Z decenic acid'
    - compartment: C_e
    - charge: 0.0
    - formula: C10H17O3
    - notes: !!omap
      - FORMULA: C10H17O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R3hdec4e_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__R3hdec4e_p
    - name: ' 3 Hydroxy 4Z decenic acid'
    - compartment: C_p
    - charge: 0.0
    - formula: C10H17O3
    - notes: !!omap
      - FORMULA: C10H17O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R3hdec4e_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__R_3hdda_c
    - name: ' 3 Hydroxydodecanoic acid'
    - compartment: C_c
    - charge: 0.0
    - formula: C12H23O3
    - notes: !!omap
      - FORMULA: C12H23O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R_3hdda_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__R_3hdda_e
    - name: ' 3 Hydroxydodecanoic acid'
    - compartment: C_e
    - charge: 0.0
    - formula: C12H23O3
    - notes: !!omap
      - FORMULA: C12H23O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R_3hdda_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__R_3hdda_p
    - name: ' 3 Hydroxydodecanoic acid'
    - compartment: C_p
    - charge: 0.0
    - formula: C12H23O3
    - notes: !!omap
      - FORMULA: C12H23O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R_3hdda_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: R_3hddcoa_c
    - name: (R)-3-hydroxylauroyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C33H54N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C33H54N7O18P3S
    - annotation: !!omap
      - biggr: R_3hddcoa_c:-4
      - biocyc: META:CPD-14918
      - chebi:
        - CHEBI:74276
      - inchikey: IJFLXRCJWPKGKJ-IGYWURMESA-J
      - metanetx.chemical: MNXM4926
      - sbo: SBO:0000247
      - seed.compound: cpd16756
  - !!omap
    - id: __iPKB_Clostridiaceae__2amac_c
    - name: 2-aminoprop-2-enoate
    - compartment: C_c
    - charge: 0.0
    - formula: C3H4NO2
    - notes: !!omap
      - FORMULA: C3H4NO2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__2amac_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__a_gal__D_c
    - name: Alpha D galactose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__a_gal__D_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: aacoa_c
    - name: acetoacetyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C25H36N7O18P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C25H36N7O18P3S
    - annotation: !!omap
      - biggr: aacoa_c:-4
      - biocyc: META:ACETOACETYL-COA
      - chebi:
        - CHEBI:57286
      - hmdb:
        - HMDB01484
        - HMDB11665
      - inchikey: OJFDKHTZOUZBOS-CITAKDKDSA-J
      - kegg.compound: C00332
      - lipidmaps: LMFA07050030
      - metanetx.chemical: MNXM133
      - reactome:
        - R-ALL-191293
        - R-ALL-73871
      - sbo: SBO:0000247
      - seed.compound: cpd00279
  - !!omap
    - id: ac_c
    - name: acetate
    - compartment: C_c
    - charge: -1.0
    - formula: C2H3O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C2H3O2
    - annotation: !!omap
      - biggr: ac_c:-1
      - biocyc: META:ACET
      - chebi:
        - CHEBI:30089
      - hmdb: HMDB00042
      - inchikey: QTBSBXVTEAMEQO-UHFFFAOYSA-M
      - kegg.compound: C00033
      - kegg.drug: D00010
      - lipidmaps: LMFA01010002
      - metanetx.chemical: MNXM26
      - reactome:
        - R-ALL-113539
        - R-ALL-1524044
        - R-ALL-2022890
        - R-ALL-29416
        - R-ALL-390305
      - sbo: SBO:0000247
      - seed.compound: cpd00029
  - !!omap
    - id: acac_c
    - name: acetoacetate
    - compartment: C_c
    - charge: -1.0
    - formula: C4H5O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H5O3
    - annotation: !!omap
      - biggr: acac_c:-1
      - biocyc: META:3-KETOBUTYRATE
      - chebi:
        - CHEBI:13705
      - hmdb: HMDB00060
      - inchikey: WDJHALXBUFZDSR-UHFFFAOYSA-M
      - kegg.compound: C00164
      - lipidmaps: LMFA01060003
      - metanetx.chemical: MNXM154
      - reactome:
        - R-ALL-29666
        - R-ALL-73909
      - sbo: SBO:0000247
      - seed.compound: cpd00142
  - !!omap
    - id: acald_c
    - name: acetaldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C2H4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H4O
    - annotation: !!omap
      - biggr: acald_c:0
      - biocyc: META:ACETALD
      - chebi:
        - CHEBI:15343
      - hmdb: HMDB00990
      - inchikey: IKHGUXGNUITLKF-UHFFFAOYSA-N
      - kegg.compound: C00084
      - metanetx.chemical: MNXM75
      - reactome:
        - R-ALL-113532
        - R-ALL-113681
        - R-ALL-113745
        - R-ALL-29510
      - sbo: SBO:0000247
      - seed.compound: cpd00071
  - !!omap
    - id: acald_e
    - name: acetaldehyde
    - compartment: C_e
    - charge: 0.0
    - formula: C2H4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H4O
    - annotation: !!omap
      - biggr: acald_e:0
      - biocyc: META:ACETALD
      - chebi:
        - CHEBI:15343
      - hmdb: HMDB00990
      - inchikey: IKHGUXGNUITLKF-UHFFFAOYSA-N
      - kegg.compound: C00084
      - metanetx.chemical: MNXM75
      - reactome:
        - R-ALL-113532
        - R-ALL-113681
        - R-ALL-113745
        - R-ALL-29510
      - sbo: SBO:0000247
      - seed.compound: cpd00071
  - !!omap
    - id: accoa_c
    - name: acetyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C23H34N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C23H34N7O17P3S
    - annotation: !!omap
      - biggr: accoa_c:-4
      - biocyc: META:ACETYL-COA
      - chebi:
        - CHEBI:57288
      - hmdb: HMDB01206
      - inchikey: ZSLZBFCDCINBPY-ZSJPKINUSA-J
      - kegg.compound: C00024
      - lipidmaps:
        - LMFA07050029
        - LMFA07050281
      - metanetx.chemical: MNXM21
      - reactome:
        - R-ALL-113559
        - R-ALL-113560
        - R-ALL-353123
        - R-ALL-727753
        - R-ALL-76183
      - sbo: SBO:0000247
      - seed.compound: cpd00022
  - !!omap
    - id: acg5p_c
    - name: N-acetyl-L-gamma-glutamyl phosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C7H9NO8P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C7H9NO8P
    - annotation: !!omap
      - biggr: acg5p_c:-3
      - biocyc: META:N-ACETYL-GLUTAMYL-P
      - chebi:
        - CHEBI:57936
      - hmdb: HMDB06456
      - inchikey: FCVIHFVSXHOPSW-YFKPBYRVSA-K
      - kegg.compound: C04133
      - metanetx.chemical: MNXM1384
      - sbo: SBO:0000247
      - seed.compound: cpd02552
  - !!omap
    - id: acg5sa_c
    - name: 2-acetamido-5-oxopentanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H10NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H10NO4
    - annotation: !!omap
      - biggr: acg5sa_c:-1
      - biocyc: META:CPD-469
      - chebi:
        - CHEBI:29123
      - hmdb: HMDB06488
      - inchikey: BCPSFKBPHHBDAI-LURJTMIESA-M
      - kegg.compound: C01250
      - metanetx.chemical: MNXM1062
      - sbo: SBO:0000247
      - seed.compound: cpd00918
  - !!omap
    - id: __iPKB_Clostridiaceae__acgam1p_c
    - name: N-Acetyl-D-glucosamine 1-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C8H14NO9P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C8H14NO9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__acgam1p_c:0
      - chebi: CHEBI:7125
      - hmdb: HMDB01367
      - inchikey: FZLJPEPAYPUMMR-RTRLPJTCSA-L
      - kegg.compound: C04256
      - metanetx.chemical: MNXM91871
      - reactome: R-ALL-532204
      - sbo: SBO:0000247
      - seed.compound: cpd02611
  - !!omap
    - id: acgam6p_c
    - name: N-acetyl-D-glucosamine 6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C8H14NO9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C8H14NO9P
    - annotation: !!omap
      - biggr: acgam6p_c:-2
      - biocyc:
        - META:CPD-16168
        - META:N-ACETYL-D-GLUCOSAMINE-6-P
      - chebi:
        - CHEBI:57513
      - hmdb:
        - HMDB01062
        - HMDB02817
      - inchikey: BRGMHAYQAZFZDJ-RTRLPJTCSA-L
      - kegg.compound: C00357
      - metanetx.chemical: MNXM63556
      - reactome: R-ALL-449703
      - sbo: SBO:0000247
      - seed.compound: cpd00293
  - !!omap
    - id: acgam_c
    - name: N-acetyl-D-glucosamine
    - compartment: C_c
    - charge: 0.0
    - formula: C8H15NO6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C8H15NO6
    - annotation: !!omap
      - biggr: acgam_c:0
      - biocyc: META:N-acetyl-D-glucosamine
      - chebi:
        - CHEBI:506227
      - hmdb:
        - HMDB00215
        - HMDB00533
        - HMDB14288
        - HMDB62641
      - inchikey: OVRNDRQMDRJTHS-RTRLPJTCSA-N
      - kegg.compound: C00140
      - metanetx.chemical: MNXM143
      - reactome:
        - R-ALL-1678743
        - R-ALL-2162231
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00122
        - cpd27608
  - !!omap
    - id: acgam_e
    - name: N-acetyl-D-glucosamine
    - compartment: C_e
    - charge: 0.0
    - formula: C8H15NO6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C8H15NO6
    - annotation: !!omap
      - biggr: acgam_e:0
      - biocyc: META:N-acetyl-D-glucosamine
      - chebi:
        - CHEBI:506227
      - hmdb:
        - HMDB00215
        - HMDB00533
        - HMDB14288
        - HMDB62641
      - inchikey: OVRNDRQMDRJTHS-RTRLPJTCSA-N
      - kegg.compound: C00140
      - metanetx.chemical: MNXM143
      - reactome:
        - R-ALL-1678743
        - R-ALL-2162231
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00122
        - cpd27608
  - !!omap
    - id: acglu_c
    - name: N-acetyl-L-glutamate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H9NO5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H9NO5
    - annotation: !!omap
      - biggr: acglu_c:-2
      - biocyc: META:ACETYL-GLU
      - chebi:
        - CHEBI:44337
      - inchikey: RFMMMVDNIPUKGG-YFKPBYRVSA-L
      - kegg.compound: C00624
      - metanetx.chemical: MNXM730
      - reactome: R-ALL-30471
      - sbo: SBO:0000247
      - seed.compound: cpd00477
  - !!omap
    - id: __iPKB_Clostridiaceae__achms_c
    - name: O Acetyl L homoserine C6H11NO4
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11NO4
    - notes: !!omap
      - FORMULA: C6H11NO4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__achms_c:0
      - biocyc: META:CPD-667
      - chebi:
        - CHEBI:12684
        - CHEBI:12709
        - CHEBI:16288
        - CHEBI:21937
        - CHEBI:57716
        - CHEBI:7667
      - inchikey: FCXZBWSIAGGPCB-YFKPBYRVSA-N
      - kegg.compound: C01077
      - metanetx.chemical: MNXM699
      - sbo: SBO:0000247
      - seed.compound: cpd00790
  - !!omap
    - id: acmana_c
    - name: N-acetyl-D-mannosamine
    - compartment: C_c
    - charge: 0.0
    - formula: C8H15NO6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C8H15NO6
    - annotation: !!omap
      - biggr: acmana_c:0
      - biocyc: META:N-acetyl-D-mannosamine
      - chebi:
        - CHEBI:63153
      - hmdb: HMDB62724
      - inchikey: MBLBDJOUHNCFQT-XAMCCFCMSA-N
      - kegg.compound: C00645
      - metanetx.chemical: MNXM2403
      - reactome: R-ALL-4085214
      - sbo: SBO:0000247
      - seed.compound: cpd00492
  - !!omap
    - id: acmana_e
    - name: N-acetyl-D-mannosamine
    - compartment: C_e
    - charge: 0.0
    - formula: C8H15NO6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C8H15NO6
    - annotation: !!omap
      - biggr: acmana_e:0
      - biocyc: META:N-acetyl-D-mannosamine
      - chebi:
        - CHEBI:63153
      - hmdb: HMDB62724
      - inchikey: MBLBDJOUHNCFQT-XAMCCFCMSA-N
      - kegg.compound: C00645
      - metanetx.chemical: MNXM2403
      - reactome: R-ALL-4085214
      - sbo: SBO:0000247
      - seed.compound: cpd00492
  - !!omap
    - id: __iPKB_Clostridiaceae__acmanap_c
    - name: N-Acetyl-D-mannosamine 6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C8H14NO9P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C8H14NO9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__acmanap_c:0
      - biocyc: META:N-ACETYL-D-MANNOSAMINE-6P
      - chebi:
        - CHEBI:21539
        - CHEBI:28273
        - CHEBI:58557
        - CHEBI:62165
        - CHEBI:62168
        - CHEBI:7142
      - hmdb: HMDB01121
      - inchikey: QDSLHWJDSQGPEE-WCTZXXKLSA-L
      - kegg.compound: C04257
      - metanetx.chemical: MNXM4708
      - reactome: R-ALL-4085225
      - sbo: SBO:0000247
      - seed.compound: cpd02612
  - !!omap
    - id: acnam_c
    - name: N-acetyl-beta-neuraminate
    - compartment: C_c
    - charge: -1.0
    - formula: C11H18NO9
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C11H18NO9
    - annotation: !!omap
      - biggr: acnam_c:-1
      - biocyc:
        - META:CPD0-1123
        - META:N-ACETYLNEURAMINATE
      - chebi:
        - CHEBI:58705
      - hmdb:
        - HMDB00230
        - HMDB00800
      - inchikey: SQVRNKJHWKZAKO-LUWBGTNYSA-M
      - kegg.compound:
        - C00270
        - C19910
      - metanetx.chemical: MNXM227
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00232
        - cpd21149
        - cpd27569
  - !!omap
    - id: acnam_e
    - name: N-acetyl-beta-neuraminate
    - compartment: C_e
    - charge: -1.0
    - formula: C11H18NO9
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C11H18NO9
    - annotation: !!omap
      - biggr: acnam_e:-1
      - biocyc:
        - META:CPD0-1123
        - META:N-ACETYLNEURAMINATE
      - chebi:
        - CHEBI:58705
      - hmdb:
        - HMDB00230
        - HMDB00800
      - inchikey: SQVRNKJHWKZAKO-LUWBGTNYSA-M
      - kegg.compound:
        - C00270
        - C19910
      - metanetx.chemical: MNXM227
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00232
        - cpd21149
        - cpd27569
  - !!omap
    - id: acon_c
    - name: cis-aconitate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C6H3O6
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H3O6
    - annotation: !!omap
      - biggr: acon_c:-3
      - biocyc: META:CIS-ACONITATE
      - chebi:
        - CHEBI:16383
      - hmdb:
        - HMDB00072
        - HMDB00461
      - inchikey: GTZCVFVGUGFEME-IWQZZHSRSA-K
      - kegg.compound: C00417
      - metanetx.chemical: MNXM813
      - sbo: SBO:0000247
      - seed.compound: cpd00331
  - !!omap
    - id: acorn_c
    - name: N(2)-acetyl-L-ornithine
    - compartment: C_c
    - charge: 0.0
    - formula: C7H14N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H14N2O3
    - annotation: !!omap
      - biggr: acorn_c:0
      - biocyc: META:N-ALPHA-ACETYLORNITHINE
      - chebi:
        - CHEBI:57805
        - CHEBI:16543
      - hmdb:
        - HMDB03357
        - HMDB06489
      - inchikey: JRLGPAXAGHMNOL-LURJTMIESA-N
      - kegg.compound: C00437
      - metanetx.chemical: MNXM817
      - sbo: SBO:0000247
      - seed.compound: cpd00342
  - !!omap
    - id: acser_c
    - name: O-acetyl-L-serine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9NO4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO4
    - annotation: !!omap
      - biggr: acser_c:0
      - biocyc: META:ACETYLSERINE
      - chebi:
        - CHEBI:58340
        - CHEBI:17981
      - hmdb: HMDB03011
      - inchikey: VZXPDPZARILFQX-BYPYZUCNSA-N
      - kegg.compound: C00979
      - metanetx.chemical: MNXM418
      - reactome: R-ALL-936709
      - sbo: SBO:0000247
      - seed.compound: cpd00722
  - !!omap
    - id: actn__R_c
    - name: (R)-acetoin
    - compartment: C_c
    - charge: 0.0
    - formula: C4H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H8O2
    - annotation: !!omap
      - biggr: actn__R_c:0
      - biocyc: META:CPD-10353
      - chebi:
        - CHEBI:15686
      - inchikey: ROWKJAVDOGWPAT-GSVOUGTGSA-N
      - kegg.compound: C00810
      - lipidmaps: LMFA12000064
      - metanetx.chemical: MNXM664
      - sbo: SBO:0000247
      - seed.compound: cpd19008
  - !!omap
    - id: actn__R_e
    - name: (R)-acetoin
    - compartment: C_e
    - charge: 0.0
    - formula: C4H8O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H8O2
    - annotation: !!omap
      - biggr: actn__R_e:0
      - biocyc: META:CPD-10353
      - chebi:
        - CHEBI:15686
      - inchikey: ROWKJAVDOGWPAT-GSVOUGTGSA-N
      - kegg.compound: C00810
      - lipidmaps: LMFA12000064
      - metanetx.chemical: MNXM664
      - sbo: SBO:0000247
      - seed.compound: cpd19008
  - !!omap
    - id: actn__S_c
    - name: (S)-acetoin
    - compartment: C_c
    - charge: 0.0
    - formula: C4H8O2
    - notes: !!omap
      - FORMULA: C4H8O2
    - annotation: !!omap
      - biggr: actn__S_c:0
      - chebi:
        - CHEBI:15687
      - sbo: SBO:0000247
  - !!omap
    - id: actp_c
    - name: acetyl phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C2H3O5P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C2H3O5P
    - annotation: !!omap
      - biggr: actp_c:-2
      - biocyc: META:ACETYL-P
      - chebi:
        - CHEBI:22191
      - hmdb: HMDB01494
      - inchikey: LIPOUNRJVLNBCD-UHFFFAOYSA-L
      - kegg.compound: C00227
      - metanetx.chemical: MNXM280
      - sbo: SBO:0000247
      - seed.compound: cpd00196
  - !!omap
    - id: ade_c
    - name: adenine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H5N5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H5N5
    - annotation: !!omap
      - biggr: ade_c:0
      - biocyc:
        - META:ADENINE
        - META:ADENINE-RING
      - chebi:
        - CHEBI:16708
      - hmdb: HMDB00034
      - inchikey: GFFGJBXGBJISGV-UHFFFAOYSA-N
      - kegg.compound: C00147
      - kegg.drug: D00034
      - metanetx.chemical: MNXM168
      - reactome: R-ALL-83951
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00128
        - cpd22238
  - !!omap
    - id: ade_e
    - name: adenine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H5N5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H5N5
    - annotation: !!omap
      - biggr: ade_e:0
      - biocyc:
        - META:ADENINE
        - META:ADENINE-RING
      - chebi:
        - CHEBI:16708
      - hmdb: HMDB00034
      - inchikey: GFFGJBXGBJISGV-UHFFFAOYSA-N
      - kegg.compound: C00147
      - kegg.drug: D00034
      - metanetx.chemical: MNXM168
      - reactome: R-ALL-83951
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00128
        - cpd22238
  - !!omap
    - id: ade_p
    - name: adenine
    - compartment: C_p
    - charge: 0.0
    - formula: C5H5N5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H5N5
    - annotation: !!omap
      - biggr: ade_p:0
      - biocyc:
        - META:ADENINE
        - META:ADENINE-RING
      - chebi:
        - CHEBI:16708
      - hmdb: HMDB00034
      - inchikey: GFFGJBXGBJISGV-UHFFFAOYSA-N
      - kegg.compound: C00147
      - kegg.drug: D00034
      - metanetx.chemical: MNXM168
      - reactome: R-ALL-83951
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00128
        - cpd22238
  - !!omap
    - id: adn_c
    - name: adenosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H13N5O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H13N5O4
    - annotation: !!omap
      - biggr: adn_c:0
      - biocyc: META:ADENOSINE
      - chebi:
        - CHEBI:16335
      - hmdb:
        - HMDB00050
        - HMDB04401
        - HMDB04402
        - HMDB04421
      - inchikey: OIRDTQYFTABQOQ-KQYNXXCUSA-N
      - kegg.compound: C00212
      - kegg.drug: D00045
      - metanetx.chemical: MNXM212
      - reactome:
        - R-ALL-83908
        - R-ALL-83909
        - R-ALL-8857850
      - sbo: SBO:0000247
      - seed.compound: cpd00182
  - !!omap
    - id: adp_c
    - name: ADP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H12N5O10P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H12N5O10P2
    - annotation: !!omap
      - biggr: adp_c:-3
      - biocyc: META:ADP
      - chebi:
        - CHEBI:456216
      - hmdb: HMDB01341
      - inchikey: XTWYTFMLZFPYCI-KQYNXXCUSA-K
      - kegg.compound: C00008
      - kegg.glycan: G11113
      - metanetx.chemical: MNXM7
      - reactome:
        - R-ALL-113581
        - R-ALL-113582
        - R-ALL-114564
        - R-ALL-114565
        - R-ALL-211606
        - R-ALL-29370
        - R-ALL-5632457
        - R-ALL-5696026
        - R-ALL-6798177
        - R-ALL-8869360
      - sbo: SBO:0000247
      - seed.compound: cpd00008
  - !!omap
    - id: adpglc_c
    - name: ADP alpha-D-glucoside(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C16H23N5O15P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C16H23N5O15P2
    - annotation: !!omap
      - biggr: adpglc_c:-2
      - biocyc: META:ADP-D-GLUCOSE
      - chebi:
        - CHEBI:57498
      - hmdb:
        - HMDB06557
        - HMDB12186
        - HMDB62621
      - inchikey: WFPZSXYXPSUOPY-ROYWQJLOSA-L
      - kegg.compound: C00498
      - kegg.glycan: G11109
      - metanetx.chemical: MNXM561
      - sbo: SBO:0000247
      - seed.compound: cpd00387
  - !!omap
    - id: adprib_c
    - name: ADP-D-ribose(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C15H21N5O14P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C15H21N5O14P2
    - annotation: !!omap
      - biggr: adprib_c:-2
      - biocyc: META:ADENOSINE_DIPHOSPHATE_RIBOSE
      - chebi:
        - CHEBI:57967
      - inchikey: SRNWOUGRCWSEMX-TYASJMOZSA-L
      - kegg.compound:
        - C00301
        - C01882
      - metanetx.chemical: MNXM48596
      - reactome:
        - R-ALL-1131972
        - R-ALL-2393945
        - R-ALL-8870342
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00251
        - cpd01296
  - !!omap
    - id: __iPKB_Clostridiaceae__ah6p__D_c
    - name: Arabino-3-hexulose-6-P
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O9P
    - notes: !!omap
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ah6p__D_c:0
      - metanetx.chemical: MNXM148082
      - sbo: SBO:0000247
  - !!omap
    - id: ahcys_c
    - name: S-adenosyl-L-homocysteine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C14H20N6O5S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C14H20N6O5S
    - annotation: !!omap
      - biggr: ahcys_c:0
      - biocyc: META:ADENOSYL-HOMO-CYS
      - chebi:
        - CHEBI:57856
        - CHEBI:16680
      - hmdb: HMDB00939
      - inchikey: ZJUKTBDSGOFHSH-WFMPWKQPSA-N
      - kegg.compound: C00021
      - metanetx.chemical: MNXM19
      - reactome:
        - R-ALL-2162252
        - R-ALL-5278409
        - R-ALL-71285
        - R-ALL-77502
      - sbo: SBO:0000247
      - seed.compound: cpd00019
  - !!omap
    - id: ahdt_c
    - name: 7,8-dihydroneopterin 3'-triphosphate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C9H12N5O13P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C9H12N5O13P3
    - annotation: !!omap
      - biggr: ahdt_c:-4
      - biocyc: META:DIHYDRONEOPTERIN-P3
      - chebi:
        - CHEBI:58462
      - hmdb:
        - HMDB00980
        - HMDB01144
        - HMDB12181
      - inchikey: DGGUVLXVLHAAGT-XINAWCOVSA-J
      - kegg.compound: C04895
      - metanetx.chemical: MNXM397
      - reactome: R-ALL-1474124
      - sbo: SBO:0000247
      - seed.compound: cpd02978
  - !!omap
    - id: aicar_c
    - name: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H13N4O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H13N4O8P
    - annotation: !!omap
      - biggr: aicar_c:-2
      - biocyc: META:AICAR
      - chebi:
        - CHEBI:58475
      - hmdb: HMDB01517
      - inchikey: NOTGFIUVDGNKRI-UUOKFMHZSA-L
      - kegg.compound: C04677
      - metanetx.chemical: MNXM365
      - reactome: R-ALL-111409
      - sbo: SBO:0000247
      - seed.compound: cpd02851
  - !!omap
    - id: __iPKB_Clostridiaceae__air_c
    - name: 5-amino-1-(5-phospho-D-ribosyl)imidazole
    - compartment: C_c
    - charge: 0.0
    - formula: C8H12N3O7P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C8H12N3O7P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__air_c:0
      - chebi:
        - CHEBI:12101
        - CHEBI:18969
        - CHEBI:2655
        - CHEBI:28843
        - CHEBI:58592
      - hmdb: HMDB62575
      - inchikey: PDACUKOKVHBVHJ-ZRTZXPPTSA-M
      - metanetx.chemical: MNXM162266
      - sbo: SBO:0000247
  - !!omap
    - id: akg_c
    - name: 2-oxoglutarate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H4O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H4O5
    - annotation: !!omap
      - biggr: akg_c:-2
      - biocyc: META:2-KETOGLUTARATE
      - chebi:
        - CHEBI:16810
      - hmdb:
        - HMDB00208
        - HMDB02812
        - HMDB62781
      - inchikey: KPGXRSRHYNQIFN-UHFFFAOYSA-L
      - kegg.compound: C00026
      - metanetx.chemical: MNXM20
      - reactome:
        - R-ALL-113594
        - R-ALL-113671
        - R-ALL-29406
        - R-ALL-389537
        - R-ALL-5278317
        - R-ALL-561075
      - sbo: SBO:0000247
      - seed.compound: cpd00024
  - !!omap
    - id: ala_B_c
    - name: beta-alanine
    - compartment: C_c
    - charge: 0.0
    - formula: C3H7NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2
    - annotation: !!omap
      - biggr: ala_B_c:0
      - biocyc: META:B-ALANINE
      - chebi:
        - CHEBI:57966
        - CHEBI:16958
      - hmdb: HMDB00056
      - inchikey: UCMIRNVEIXFBKS-UHFFFAOYSA-N
      - kegg.compound: C00099
      - kegg.drug: D07561
      - metanetx.chemical: MNXM144
      - reactome:
        - R-ALL-73590
        - R-ALL-909777
      - sbo: SBO:0000247
      - seed.compound: cpd00085
  - !!omap
    - id: ala_L_asp__L_c
    - name: Ala-Asp(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C7H11N2O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H11N2O5
    - annotation: !!omap
      - biggr: ala_L_asp__L_c:-1
      - biocyc: META:CPD-13404
      - chebi:
        - CHEBI:74363
      - inchikey: XAEWTDMGFGHWFK-IMJSIDKUSA-M
      - metanetx.chemical: MNXM40494
      - sbo: SBO:0000247
      - seed.compound: cpd11593
  - !!omap
    - id: ala_L_asp__L_e
    - name: Ala-Asp(1-)
    - compartment: C_e
    - charge: -1.0
    - formula: C7H11N2O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H11N2O5
    - annotation: !!omap
      - biggr: ala_L_asp__L_e:-1
      - biocyc: META:CPD-13404
      - chebi:
        - CHEBI:74363
      - inchikey: XAEWTDMGFGHWFK-IMJSIDKUSA-M
      - metanetx.chemical: MNXM40494
      - sbo: SBO:0000247
      - seed.compound: cpd11593
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_L_glu__L_c
    - name: Ala L glu L C8H13N2O5
    - compartment: C_c
    - charge: 0.0
    - formula: C8H13N2O5
    - notes: !!omap
      - FORMULA: C8H13N2O5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_L_glu__L_c:0
      - metanetx.chemical: MNXM8263
      - sbo: SBO:0000247
      - seed.compound: cpd11586
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_L_glu__L_e
    - name: Ala L glu L C8H13N2O5
    - compartment: C_e
    - charge: 0.0
    - formula: C8H13N2O5
    - notes: !!omap
      - FORMULA: C8H13N2O5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_L_glu__L_e:0
      - metanetx.chemical: MNXM8263
      - sbo: SBO:0000247
      - seed.compound: cpd11586
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_L_thr__L_c
    - name: Ala-L-Thr-L
    - compartment: C_c
    - charge: 0.0
    - formula: C7H14N2O4
    - notes: !!omap
      - FORMULA: C7H14N2O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_L_thr__L_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_L_thr__L_e
    - name: Ala-L-Thr-L
    - compartment: C_e
    - charge: 0.0
    - formula: C7H14N2O4
    - notes: !!omap
      - FORMULA: C7H14N2O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_L_thr__L_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: ala__D_c
    - name: D-alanine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C3H7NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2
    - annotation: !!omap
      - biggr: ala__D_c:0
      - biocyc: META:D-ALANINE
      - chebi:
        - CHEBI:57416
        - CHEBI:15570
      - hmdb: HMDB01310
      - inchikey: QNAYBMKLOCPYGJ-UWTATZPHSA-N
      - kegg.compound: C00133
      - metanetx.chemical: MNXM156
      - sbo: SBO:0000247
      - seed.compound: cpd00117
  - !!omap
    - id: ala__D_e
    - name: D-alanine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C3H7NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2
    - annotation: !!omap
      - biggr: ala__D_e:0
      - biocyc: META:D-ALANINE
      - chebi:
        - CHEBI:57416
        - CHEBI:15570
      - hmdb: HMDB01310
      - inchikey: QNAYBMKLOCPYGJ-UWTATZPHSA-N
      - kegg.compound: C00133
      - metanetx.chemical: MNXM156
      - sbo: SBO:0000247
      - seed.compound: cpd00117
  - !!omap
    - id: ala__D_p
    - name: D-alanine zwitterion
    - compartment: C_p
    - charge: 0.0
    - formula: C3H7NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2
    - annotation: !!omap
      - biggr: ala__D_p:0
      - biocyc: META:D-ALANINE
      - chebi:
        - CHEBI:57416
        - CHEBI:15570
      - hmdb: HMDB01310
      - inchikey: QNAYBMKLOCPYGJ-UWTATZPHSA-N
      - kegg.compound: C00133
      - metanetx.chemical: MNXM156
      - sbo: SBO:0000247
      - seed.compound: cpd00117
  - !!omap
    - id: ala__L_c
    - name: L-alanine
    - compartment: C_c
    - charge: 0.0
    - formula: C3H7NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2
    - annotation: !!omap
      - biggr: ala__L_c:0
      - biocyc: META:L-ALPHA-ALANINE
      - chebi:
        - CHEBI:57972
        - CHEBI:16977
      - hmdb:
        - HMDB00161
        - HMDB62251
      - inchikey: QNAYBMKLOCPYGJ-REOHCLBHSA-N
      - kegg.compound:
        - C00041
        - C01401
      - kegg.drug: D00012
      - metanetx.chemical: MNXM32
      - reactome:
        - R-ALL-29432
        - R-ALL-352036
        - R-ALL-379697
        - R-ALL-389664
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00035
        - cpd01003
  - !!omap
    - id: ala__L_e
    - name: L-alanine
    - compartment: C_e
    - charge: 0.0
    - formula: C3H7NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2
    - annotation: !!omap
      - biggr: ala__L_e:0
      - biocyc: META:L-ALPHA-ALANINE
      - chebi:
        - CHEBI:57972
        - CHEBI:16977
      - hmdb:
        - HMDB00161
        - HMDB62251
      - inchikey: QNAYBMKLOCPYGJ-REOHCLBHSA-N
      - kegg.compound:
        - C00041
        - C01401
      - kegg.drug: D00012
      - metanetx.chemical: MNXM32
      - reactome:
        - R-ALL-29432
        - R-ALL-352036
        - R-ALL-379697
        - R-ALL-389664
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00035
        - cpd01003
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_gln_c
    - name: Ala-Gln
    - compartment: C_c
    - charge: 0.0
    - formula: C8H15N3O4
    - notes: !!omap
      - FORMULA: C8H15N3O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_gln_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_gln_e
    - name: Ala-Gln
    - compartment: C_e
    - charge: 0.0
    - formula: C8H15N3O4
    - notes: !!omap
      - FORMULA: C8H15N3O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_gln_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_his_c
    - name: Ala-His
    - compartment: C_c
    - charge: 0.0
    - formula: C9H14N4O3
    - notes: !!omap
      - FORMULA: C9H14N4O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_his_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_his_e
    - name: Ala-His
    - compartment: C_e
    - charge: 0.0
    - formula: C9H14N4O3
    - notes: !!omap
      - FORMULA: C9H14N4O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_his_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_leu_c
    - name: Ala-Leu
    - compartment: C_c
    - charge: 0.0
    - formula: C9H18N2O3
    - notes: !!omap
      - FORMULA: C9H18N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_leu_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__ala_leu_e
    - name: Ala-Leu
    - compartment: C_e
    - charge: 0.0
    - formula: C9H18N2O3
    - notes: !!omap
      - FORMULA: C9H18N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ala_leu_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: alaala_c
    - name: D-alanyl-D-alanine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: alaala_c:0
      - biocyc: META:D-ALA-D-ALA
      - chebi:
        - CHEBI:57822
        - CHEBI:16576
      - hmdb: HMDB03459
      - inchikey: DEFJQIDDEAULHB-QWWZWVQMSA-N
      - kegg.compound: C00993
      - metanetx.chemical: MNXM669
      - sbo: SBO:0000247
      - seed.compound: cpd00731
  - !!omap
    - id: alaala_e
    - name: D-alanyl-D-alanine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: alaala_e:0
      - biocyc: META:D-ALA-D-ALA
      - chebi:
        - CHEBI:57822
        - CHEBI:16576
      - hmdb: HMDB03459
      - inchikey: DEFJQIDDEAULHB-QWWZWVQMSA-N
      - kegg.compound: C00993
      - metanetx.chemical: MNXM669
      - sbo: SBO:0000247
      - seed.compound: cpd00731
  - !!omap
    - id: alaala_p
    - name: D-alanyl-D-alanine zwitterion
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: alaala_p:0
      - biocyc: META:D-ALA-D-ALA
      - chebi:
        - CHEBI:57822
        - CHEBI:16576
      - hmdb: HMDB03459
      - inchikey: DEFJQIDDEAULHB-QWWZWVQMSA-N
      - kegg.compound: C00993
      - metanetx.chemical: MNXM669
      - sbo: SBO:0000247
      - seed.compound: cpd00731
  - !!omap
    - id: alac__S_c
    - name: (2S)-2-hydroxy-2-methyl-3-oxobutanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H7O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H7O4
    - annotation: !!omap
      - biggr: alac__S_c:-1
      - biocyc: META:2-ACETO-LACTATE
      - chebi:
        - CHEBI:58476
      - hmdb: HMDB06855
      - inchikey: NMDWGEGFJUBKLB-YFKPBYRVSA-M
      - kegg.compound: C06010
      - lipidmaps: LMFA01050460
      - metanetx.chemical: MNXM114079
      - sbo: SBO:0000247
      - seed.compound: cpd19047
  - !!omap
    - id: __iPKB_Clostridiaceae__alagly_c
    - name: L-alanylglycine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__alagly_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__alagly_e
    - name: L-alanylglycine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__alagly_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: alltt_c
    - name: allantoate
    - compartment: C_c
    - charge: -1.0
    - formula: C4H7N4O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H7N4O4
    - annotation: !!omap
      - biggr: alltt_c:-1
      - biocyc: META:ALLANTOATE
      - chebi:
        - CHEBI:17536
      - hmdb: HMDB01209
      - inchikey: NUCLJNSWZCHRKL-UHFFFAOYSA-M
      - kegg.compound: C00499
      - metanetx.chemical: MNXM584
      - sbo: SBO:0000247
      - seed.compound: cpd00388
  - !!omap
    - id: amet_c
    - name: (S)-S-adenosyl-L-methionine
    - compartment: C_c
    - charge: 1.0
    - formula: C15H23N6O5S
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C15H23N6O5S
    - annotation: !!omap
      - biggr: amet_c:1
      - biocyc: META:S-ADENOSYLMETHIONINE
      - chebi:
        - CHEBI:142094
        - CHEBI:33442
      - hmdb:
        - HMDB01185
        - HMDB62709
      - inchikey: MEFKEPWMEQBLKI-AIRLBKTGSA-O
      - kegg.compound: C00019
      - metanetx.chemical: MNXM16
      - reactome:
        - R-ALL-2162265
        - R-ALL-353113
        - R-ALL-5279190
        - R-ALL-71284
        - R-ALL-77087
      - sbo: SBO:0000247
      - seed.compound: cpd00017
  - !!omap
    - id: __iPKB_Clostridiaceae__ametam_c
    - name: S-Adenosylmethioninamine
    - compartment: C_c
    - charge: 0.0
    - formula: C14H24N6O3S
    - notes: !!omap
      - CHARGE: '2.0'
      - FORMULA: C14H24N6O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ametam_c:0
      - biocyc: META:S-ADENOSYLMETHIONINAMINE
      - chebi:
        - CHEBI:10906
        - CHEBI:12743
        - CHEBI:12762
        - CHEBI:15625
        - CHEBI:22035
        - CHEBI:57443
        - CHEBI:8947
      - hmdb: HMDB00988
      - inchikey: ZUNBITIXDCPNSD-LSRJEVITSA-O
      - kegg.compound: C01137
      - metanetx.chemical: MNXM321
      - sbo: SBO:0000247
      - seed.compound: cpd00837
  - !!omap
    - id: amp_c
    - name: adenosine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H12N5O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H12N5O7P
    - annotation: !!omap
      - biggr: amp_c:-2
      - biocyc:
        - META:AMP
        - META:AMP-GROUP
      - chebi:
        - CHEBI:456215
      - hmdb: HMDB00045
      - inchikey: UDMBCSSLTHHNCD-KQYNXXCUSA-L
      - kegg.compound: C00020
      - kegg.drug: D02769
      - metanetx.chemical: MNXM14
      - reactome:
        - R-ALL-109275
        - R-ALL-159448
        - R-ALL-164121
        - R-ALL-389620
        - R-ALL-76577
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00018
        - cpd22272
  - !!omap
    - id: __iPKB_Clostridiaceae__anhgm3p_p
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide
    - compartment: C_p
    - charge: 0.0
    - formula: C34H52N6O19
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C34H52N6O19
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__anhgm3p_p:0
      - biocyc: META:CPD0-2155
      - inchikey: ZWZMFRJKRXDGBE-UHFFFAOYSA-L
      - metanetx.chemical: MNXM63489
      - sbo: SBO:0000247
      - seed.compound: cpd15397
  - !!omap
    - id: anhgm4p_p
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide
    - compartment: C_p
    - charge: -2.0
    - formula: C37H57N7O20
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C37H57N7O20
    - annotation: !!omap
      - biggr: anhgm4p_p:-2
      - biocyc: META:CPD0-2292
      - inchikey: ZTOWCORYLXDAAW-JOUWMGDHSA-L
      - metanetx.chemical: MNXM63488
      - sbo: SBO:0000247
      - seed.compound: cpd15398
  - !!omap
    - id: anhgm_e
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid
    - compartment: C_e
    - charge: -1.0
    - formula: C19H29N2O12
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C19H29N2O12
    - annotation: !!omap
      - biggr: anhgm_e:-1
      - metanetx.chemical: MNXM3060
      - sbo: SBO:0000247
      - seed.compound: cpd15396
  - !!omap
    - id: anhgm_p
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid
    - compartment: C_p
    - charge: -1.0
    - formula: C19H29N2O12
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C19H29N2O12
    - annotation: !!omap
      - biggr: anhgm_p:-1
      - metanetx.chemical: MNXM3060
      - sbo: SBO:0000247
      - seed.compound: cpd15396
  - !!omap
    - id: anth_c
    - name: anthranilate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H6NO2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H6NO2
    - annotation: !!omap
      - biggr: anth_c:-1
      - biocyc: META:ANTHRANILATE
      - chebi:
        - CHEBI:16567
      - hmdb: HMDB01123
      - inchikey: RWZYAGGXGHYGMB-UHFFFAOYSA-M
      - kegg.compound: C00108
      - metanetx.chemical: MNXM188
      - sbo: SBO:0000247
      - seed.compound: cpd00093
  - !!omap
    - id: arab__L_c
    - name: aldehydo-L-arabinose
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: arab__L_c:0
      - biocyc:
        - META:CPD-15699
        - META:L-ARABINOSE
      - chebi:
        - CHEBI:6182
      - inchikey: PYMYPHUHKUWMLA-VAYJURFESA-N
      - kegg.compound: C11476
      - metanetx.chemical: MNXM91126
      - sbo: SBO:0000247
      - seed.compound:
        - cpd19109
        - cpd27351
  - !!omap
    - id: arab__L_e
    - name: aldehydo-L-arabinose
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: arab__L_e:0
      - biocyc:
        - META:CPD-15699
        - META:L-ARABINOSE
      - chebi:
        - CHEBI:6182
      - inchikey: PYMYPHUHKUWMLA-VAYJURFESA-N
      - kegg.compound: C11476
      - metanetx.chemical: MNXM91126
      - sbo: SBO:0000247
      - seed.compound:
        - cpd19109
        - cpd27351
  - !!omap
    - id: arbt6p_c
    - name: arbutin 6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C12H15O10P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C12H15O10P
    - annotation: !!omap
      - biggr: arbt6p_c:-2
      - biocyc: META:CPD-1162
      - chebi:
        - CHEBI:60929
      - inchikey: FBHYCDOVYMVLEN-RMPHRYRLSA-L
      - kegg.compound: C06187
      - metanetx.chemical: MNXM2806
      - sbo: SBO:0000247
      - seed.compound: cpd03697
  - !!omap
    - id: arbt_e
    - name: hydroquinone O-beta-D-glucopyranoside
    - compartment: C_e
    - charge: 0.0
    - formula: C12H16O7
    - notes: !!omap
      - FORMULA: C12H16O7
    - annotation: !!omap
      - biggr: arbt_e:0
      - biocyc: META:HYDROQUINONE-O-BETA-D-GLUCOPYRANOSIDE
      - chebi:
        - CHEBI:18305
      - hmdb: HMDB29943
      - inchikey: BJRNKVDFDLYUGJ-RMPHRYRLSA-N
      - kegg.compound: C06186
      - metanetx.chemical: MNXM2683
      - sbo: SBO:0000247
      - seed.compound: cpd03696
  - !!omap
    - id: arg__L_c
    - name: L-argininium(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: C6H15N4O2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H15N4O2
    - annotation: !!omap
      - biggr: arg__L_c:1
      - biocyc: META:ARG
      - chebi:
        - CHEBI:32682
      - hmdb:
        - HMDB00517
        - HMDB62762
      - inchikey: ODKSFYDXXFIFQN-BYPYZUCNSA-O
      - kegg.compound:
        - C00062
        - C02385
      - kegg.drug: D02982
      - metanetx.chemical: MNXM70
      - reactome:
        - R-ALL-113530
        - R-ALL-29468
        - R-ALL-351977
        - R-ALL-374064
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00051
        - cpd19021
  - !!omap
    - id: arg__L_e
    - name: L-argininium(1+)
    - compartment: C_e
    - charge: 1.0
    - formula: C6H15N4O2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H15N4O2
    - annotation: !!omap
      - biggr: arg__L_e:1
      - biocyc: META:ARG
      - chebi:
        - CHEBI:32682
      - hmdb:
        - HMDB00517
        - HMDB62762
      - inchikey: ODKSFYDXXFIFQN-BYPYZUCNSA-O
      - kegg.compound:
        - C00062
        - C02385
      - kegg.drug: D02982
      - metanetx.chemical: MNXM70
      - reactome:
        - R-ALL-113530
        - R-ALL-29468
        - R-ALL-351977
        - R-ALL-374064
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00051
        - cpd19021
  - !!omap
    - id: __iPKB_Clostridiaceae__argsuc_c
    - name: N(omega)-(L-Arginino)succinate
    - compartment: C_c
    - charge: 0.0
    - formula: C10H17N4O6
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C10H17N4O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__argsuc_c:0
      - biocyc: META:L-ARGININO-SUCCINATE
      - chebi:
        - CHEBI:10960
        - CHEBI:15682
        - CHEBI:21475
        - CHEBI:57472
        - CHEBI:7098
      - hmdb:
        - HMDB00052
        - HMDB01006
      - inchikey: KDZOASGQNOPSCU-ZBHICJROSA-M
      - kegg.compound: C03406
      - metanetx.chemical: MNXM722743
      - reactome: R-ALL-34575
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02152
        - cpd29673
  - !!omap
    - id: __iPKB_Clostridiaceae__ascb6p_c
    - name: L-ascorbate-6-phosphate
    - compartment: C_c
    - charge: -2.0
    - formula: C6H7O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H7O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ascb6p_c:-2
      - biocyc: META:L-ASCORBATE-6-PHOSPHATE
      - chebi:
        - CHEBI:61698
        - CHEBI:61701
        - CHEBI:80368
      - inchikey: KIENGQUGHPTFGC-JLAZNSOCSA-K
      - kegg.compound: C16186
      - metanetx.chemical: MNXM2689
      - sbo: SBO:0000247
      - seed.compound: cpd14905
  - !!omap
    - id: ascb__L_e
    - name: L-ascorbic acid
    - compartment: C_e
    - charge: 0.0
    - formula: C6H8O6
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: C6H8O6
    - annotation: !!omap
      - biggr: ascb__L_e:0
      - biocyc: META:ASCORBATE
      - chebi:
        - CHEBI:29073
      - hmdb:
        - HMDB00044
        - HMDB14273
        - HMDB29945
      - inchikey: CIWBSHSKHKDKBQ-JLAZNSOCSA-M
      - kegg.compound:
        - C00072
        - C20364
      - kegg.drug: D00018
      - metanetx.chemical: MNXM129
      - reactome:
        - R-ALL-198816
        - R-ALL-198836
        - R-ALL-351595
      - sbo: SBO:0000247
      - seed.compound: cpd00059
  - !!omap
    - id: asn__L_c
    - name: L-asparagine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C4H8N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H8N2O3
    - annotation: !!omap
      - biggr: asn__L_c:0
      - biocyc: META:ASN
      - chebi:
        - CHEBI:58048
        - CHEBI:17196
      - hmdb: HMDB00168
      - inchikey: DCXYFEDJOCDNAF-REOHCLBHSA-N
      - kegg.compound:
        - C00152
        - C16438
      - metanetx.chemical: MNXM147
      - reactome:
        - R-ALL-29642
        - R-ALL-379703
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00132
        - cpd15142
  - !!omap
    - id: asn__L_e
    - name: L-asparagine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C4H8N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H8N2O3
    - annotation: !!omap
      - biggr: asn__L_e:0
      - biocyc: META:ASN
      - chebi:
        - CHEBI:58048
        - CHEBI:17196
      - hmdb: HMDB00168
      - inchikey: DCXYFEDJOCDNAF-REOHCLBHSA-N
      - kegg.compound:
        - C00152
        - C16438
      - metanetx.chemical: MNXM147
      - reactome:
        - R-ALL-29642
        - R-ALL-379703
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00132
        - cpd15142
  - !!omap
    - id: aso3_c
    - name: arsenous acid
    - compartment: C_c
    - charge: 0.0
    - formula: AsH3O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H3AsO3
    - annotation: !!omap
      - biggr: aso3_c:0
      - biocyc:
        - META:CPD-763
        - META:CPD0-2040
      - chebi:
        - CHEBI:49900
      - hmdb: HMDB11620
      - inchikey: AQLMHYSWFMLWBS-UHFFFAOYSA-N
      - kegg.compound: C06697
      - metanetx.chemical: MNXM658
      - reactome: R-ALL-5696216
      - sbo: SBO:0000247
      - seed.compound:
        - cpd04098
        - cpd26385
  - !!omap
    - id: aso3_e
    - name: arsenous acid
    - compartment: C_e
    - charge: 0.0
    - formula: AsH3O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H3AsO3
    - annotation: !!omap
      - biggr: aso3_e:0
      - biocyc:
        - META:CPD-763
        - META:CPD0-2040
      - chebi:
        - CHEBI:49900
      - hmdb: HMDB11620
      - inchikey: AQLMHYSWFMLWBS-UHFFFAOYSA-N
      - kegg.compound: C06697
      - metanetx.chemical: MNXM658
      - reactome: R-ALL-5696216
      - sbo: SBO:0000247
      - seed.compound:
        - cpd04098
        - cpd26385
  - !!omap
    - id: aso3_p
    - name: arsenous acid
    - compartment: C_p
    - charge: 0.0
    - formula: AsH3O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H3AsO3
    - annotation: !!omap
      - biggr: aso3_p:0
      - biocyc:
        - META:CPD-763
        - META:CPD0-2040
      - chebi:
        - CHEBI:49900
      - hmdb: HMDB11620
      - inchikey: AQLMHYSWFMLWBS-UHFFFAOYSA-N
      - kegg.compound: C06697
      - metanetx.chemical: MNXM658
      - reactome: R-ALL-5696216
      - sbo: SBO:0000247
      - seed.compound:
        - cpd04098
        - cpd26385
  - !!omap
    - id: arsna_c
    - name: arsenate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: AsHO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: HAsO4
    - annotation: !!omap
      - biggr: arsna_c:-2
      - biocyc: META:ARSENATE
      - chebi:
        - CHEBI:48597
      - hmdb: HMDB12190
      - inchikey: DJHGAFSJWGLOIV-UHFFFAOYSA-L
      - kegg.compound:
        - C01478
        - C11215
      - metanetx.chemical: MNXM970
      - sbo: SBO:0000247
      - seed.compound: cpd01048
  - !!omap
    - id: arsna_e
    - name: arsenate(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: AsHO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: HAsO4
    - annotation: !!omap
      - biggr: arsna_e:-2
      - biocyc: META:ARSENATE
      - chebi:
        - CHEBI:48597
      - hmdb: HMDB12190
      - inchikey: DJHGAFSJWGLOIV-UHFFFAOYSA-L
      - kegg.compound:
        - C01478
        - C11215
      - metanetx.chemical: MNXM970
      - sbo: SBO:0000247
      - seed.compound: cpd01048
  - !!omap
    - id: arsna_p
    - name: arsenate(2-)
    - compartment: C_p
    - charge: -2.0
    - formula: AsHO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: HAsO4
    - annotation: !!omap
      - biggr: arsna_p:-2
      - biocyc: META:ARSENATE
      - chebi:
        - CHEBI:48597
      - hmdb: HMDB12190
      - inchikey: DJHGAFSJWGLOIV-UHFFFAOYSA-L
      - kegg.compound:
        - C01478
        - C11215
      - metanetx.chemical: MNXM970
      - sbo: SBO:0000247
      - seed.compound: cpd01048
  - !!omap
    - id: asp__D_c
    - name: D-aspartate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C4H6NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H6NO4
    - annotation: !!omap
      - biggr: asp__D_c:-1
      - biocyc: META:CPD-302
      - chebi:
        - CHEBI:29990
      - hmdb: HMDB06483
      - inchikey: CKLJMWTZIZZHCS-UWTATZPHSA-M
      - kegg.compound: C00402
      - metanetx.chemical: MNXM974
      - sbo: SBO:0000247
      - seed.compound: cpd00320
  - !!omap
    - id: asp__D_e
    - name: D-aspartate(1-)
    - compartment: C_e
    - charge: -1.0
    - formula: C4H6NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H6NO4
    - annotation: !!omap
      - biggr: asp__D_e:-1
      - biocyc: META:CPD-302
      - chebi:
        - CHEBI:29990
      - hmdb: HMDB06483
      - inchikey: CKLJMWTZIZZHCS-UWTATZPHSA-M
      - kegg.compound: C00402
      - metanetx.chemical: MNXM974
      - sbo: SBO:0000247
      - seed.compound: cpd00320
  - !!omap
    - id: asp__L_c
    - name: L-aspartate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C4H6NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H6NO4
    - annotation: !!omap
      - biggr: asp__L_c:-1
      - biocyc: META:L-ASPARTATE
      - chebi:
        - CHEBI:29991
      - hmdb:
        - HMDB00191
        - HMDB62186
        - HMDB62501
      - inchikey: CKLJMWTZIZZHCS-REOHCLBHSA-M
      - kegg.compound:
        - C00049
        - C16433
      - kegg.drug: D00013
      - metanetx.chemical: MNXM42
      - reactome:
        - R-ALL-113553
        - R-ALL-29448
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00041
        - cpd19181
  - !!omap
    - id: asp__L_e
    - name: L-aspartate(1-)
    - compartment: C_e
    - charge: -1.0
    - formula: C4H6NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H6NO4
    - annotation: !!omap
      - biggr: asp__L_e:-1
      - biocyc: META:L-ASPARTATE
      - chebi:
        - CHEBI:29991
      - hmdb:
        - HMDB00191
        - HMDB62186
        - HMDB62501
      - inchikey: CKLJMWTZIZZHCS-REOHCLBHSA-M
      - kegg.compound:
        - C00049
        - C16433
      - kegg.drug: D00013
      - metanetx.chemical: MNXM42
      - reactome:
        - R-ALL-113553
        - R-ALL-29448
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00041
        - cpd19181
  - !!omap
    - id: asp__L_p
    - name: L-aspartate(1-)
    - compartment: C_p
    - charge: -1.0
    - formula: C4H6NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H6NO4
    - annotation: !!omap
      - biggr: asp__L_p:-1
      - biocyc: META:L-ASPARTATE
      - chebi:
        - CHEBI:29991
      - hmdb:
        - HMDB00191
        - HMDB62186
        - HMDB62501
      - inchikey: CKLJMWTZIZZHCS-REOHCLBHSA-M
      - kegg.compound:
        - C00049
        - C16433
      - kegg.drug: D00013
      - metanetx.chemical: MNXM42
      - reactome:
        - R-ALL-113553
        - R-ALL-29448
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00041
        - cpd19181
  - !!omap
    - id: aspsa_c
    - name: L-aspartic acid 4-semialdehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C4H7NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H7NO3
    - annotation: !!omap
      - biggr: aspsa_c:0
      - biocyc: META:L-ASPARTATE-SEMIALDEHYDE
      - chebi:
        - CHEBI:537519
        - CHEBI:18051
      - hmdb: HMDB12249
      - inchikey: HOSWPDPVFBCLSY-VKHMYHEASA-N
      - kegg.compound: C00441
      - metanetx.chemical: MNXM361
      - sbo: SBO:0000247
      - seed.compound: cpd00346
  - !!omap
    - id: atp_c
    - name: ATP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H12N5O13P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H12N5O13P3
    - annotation: !!omap
      - biggr: atp_c:-4
      - biocyc: META:ATP
      - chebi:
        - CHEBI:30616
      - hmdb: HMDB00538
      - inchikey: ZKHQWZAMYRWXGA-KQYNXXCUSA-J
      - kegg.compound: C00002
      - kegg.drug: D08646
      - metanetx.chemical: MNXM3
      - reactome:
        - R-ALL-113592
        - R-ALL-113593
        - R-ALL-211579
        - R-ALL-29358
        - R-ALL-389573
        - R-ALL-5632460
        - R-ALL-5696069
        - R-ALL-6798184
        - R-ALL-8869363
        - R-ALL-8878982
        - R-ALL-8938081
      - sbo: SBO:0000247
      - seed.compound: cpd00002
  - !!omap
    - id: b2coa_c
    - name: crotonoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C25H36N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C25H36N7O17P3S
    - annotation: !!omap
      - biggr: b2coa_c:-4
      - biocyc: META:CROTONYL-COA
      - chebi:
        - CHEBI:57332
      - hmdb:
        - HMDB02009
        - HMDB59627
        - HMDB62466
      - inchikey: KFWWCMJSYSSPSK-PAXLJYGASA-J
      - kegg.compound: C00877
      - lipidmaps: LMFA07050307
      - metanetx.chemical: MNXM214
      - reactome:
        - R-ALL-71045
        - R-ALL-77313
      - sbo: SBO:0000247
      - seed.compound: cpd00650
  - !!omap
    - id: __iPKB_Clostridiaceae__balaala_c
    - name: Beta alanylL alanine
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balaala_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balaala_e
    - name: Beta alanylL alanine
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balaala_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balaala_p
    - name: Beta alanylL alanine
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balaala_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balabala_c
    - name: Beta alanyl beta alanine
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balabala_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balabala_e
    - name: Beta alanyl beta alanine
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balabala_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balabala_p
    - name: Beta alanyl beta alanine
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12N2O3
    - notes: !!omap
      - FORMULA: C6H12N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balabala_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balagly_c
    - name: Beta alanylL glycine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balagly_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balagly_e
    - name: Beta alanylL glycine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balagly_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balagly_p
    - name: Beta alanylL glycine
    - compartment: C_p
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balagly_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balaleu_c
    - name: Beta alanylL leucine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H18N2O3
    - notes: !!omap
      - FORMULA: C9H18N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balaleu_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balaleu_e
    - name: Beta alanylL leucine
    - compartment: C_e
    - charge: 0.0
    - formula: C9H18N2O3
    - notes: !!omap
      - FORMULA: C9H18N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balaleu_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balaleu_p
    - name: Beta alanylL leucine
    - compartment: C_p
    - charge: 0.0
    - formula: C9H18N2O3
    - notes: !!omap
      - FORMULA: C9H18N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balaleu_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balamd_c
    - name: Beta Alaninamide
    - compartment: C_c
    - charge: 0.0
    - formula: C3H9N2O
    - notes: !!omap
      - FORMULA: C3H9N2O
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balamd_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balamd_e
    - name: Beta Alaninamide
    - compartment: C_e
    - charge: 0.0
    - formula: C3H9N2O
    - notes: !!omap
      - FORMULA: C3H9N2O
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balamd_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__balamd_p
    - name: Beta Alaninamide
    - compartment: C_p
    - charge: 0.0
    - formula: C3H9N2O
    - notes: !!omap
      - FORMULA: C3H9N2O
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__balamd_p:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__benzcoa_c
    - name: Benzoyl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C28H40N7O17P3S
    - notes: !!omap
      - FORMULA: C28H40N7O17P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__benzcoa_c:0
      - biocyc: META:BENZOYLCOA
      - chebi:
        - CHEBI:13882
        - CHEBI:13883
        - CHEBI:15515
        - CHEBI:22735
        - CHEBI:57369
        - CHEBI:8952
      - hmdb: HMDB02252
      - inchikey: VEVJTUNLALKRNO-TYHXJLICSA-J
      - kegg.compound: C00512
      - metanetx.chemical: MNXM240
      - reactome: R-ALL-159447
      - sbo: SBO:0000247
      - seed.compound: cpd00401
  - !!omap
    - id: bglycogen_c
    - name: Branching glycogen
    - compartment: C_c
    - charge: 0.0
    - formula: C24H42O21
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C24H42O21
    - annotation: !!omap
      - biggr: bglycogen_c:0
      - metanetx.chemical: MNXM8348
      - sbo: SBO:0000247
      - seed.compound: cpd15413
  - !!omap
    - id: btal_c
    - name: butanal
    - compartment: C_c
    - charge: 0.0
    - formula: C4H8O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H8O
    - annotation: !!omap
      - biggr: btal_c:0
      - biocyc: META:BUTANAL
      - chebi:
        - CHEBI:15743
      - hmdb: HMDB03543
      - inchikey: ZTQSAGDEMFDKMZ-UHFFFAOYSA-N
      - kegg.compound: C01412
      - metanetx.chemical: MNXM1017
      - sbo: SBO:0000247
      - seed.compound: cpd01011
  - !!omap
    - id: btcoa_c
    - name: butyryl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C25H38N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C25H38N7O17P3S
    - annotation: !!omap
      - biggr: btcoa_c:-4
      - biocyc: META:BUTYRYL-COA
      - chebi:
        - CHEBI:57371
      - hmdb: HMDB01088
      - inchikey: CRFNGMNYKDXRTN-CITAKDKDSA-J
      - kegg.compound: C00136
      - lipidmaps: LMFA07050292
      - metanetx.chemical: MNXM233
      - reactome: R-ALL-77318
      - sbo: SBO:0000247
      - seed.compound: cpd00120
  - !!omap
    - id: btd_RR_c
    - name: (R,R)-butane-2,3-diol
    - compartment: C_c
    - charge: 0.0
    - formula: C4H10O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H10O2
    - annotation: !!omap
      - biggr: btd_RR_c:0
      - chebi:
        - CHEBI:16982
      - metanetx.chemical: MNXM163570
      - sbo: SBO:0000247
  - !!omap
    - id: btn_c
    - name: biotinate
    - compartment: C_c
    - charge: -1.0
    - formula: C10H15N2O3S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H15N2O3S
    - annotation: !!omap
      - biggr: btn_c:-1
      - biocyc: META:BIOTIN
      - chebi:
        - CHEBI:57586
      - hmdb: HMDB00030
      - inchikey: YBJHBAHKTGYVGT-ZKWXMUAHSA-M
      - kegg.compound: C00120
      - kegg.drug: D00029
      - metanetx.chemical: MNXM304
      - reactome:
        - R-ALL-199207
        - R-ALL-199238
        - R-ALL-29582
      - sbo: SBO:0000247
      - seed.compound: cpd00104
  - !!omap
    - id: btn_e
    - name: biotinate
    - compartment: C_e
    - charge: -1.0
    - formula: C10H15N2O3S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H15N2O3S
    - annotation: !!omap
      - biggr: btn_e:-1
      - biocyc: META:BIOTIN
      - chebi:
        - CHEBI:57586
      - hmdb: HMDB00030
      - inchikey: YBJHBAHKTGYVGT-ZKWXMUAHSA-M
      - kegg.compound: C00120
      - kegg.drug: D00029
      - metanetx.chemical: MNXM304
      - reactome:
        - R-ALL-199207
        - R-ALL-199238
        - R-ALL-29582
      - sbo: SBO:0000247
      - seed.compound: cpd00104
  - !!omap
    - id: btoh_c
    - name: butan-1-ol
    - compartment: C_c
    - charge: 0.0
    - formula: C4H10O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H10O
    - annotation: !!omap
      - biggr: btoh_c:0
      - biocyc: META:BUTANOL
      - chebi:
        - CHEBI:28885
      - hmdb: HMDB04327
      - inchikey: LRHPLDYGYMQRHN-UHFFFAOYSA-N
      - kegg.compound: C06142
      - kegg.drug: D03200
      - lipidmaps: LMFA05000109
      - metanetx.chemical: MNXM3230
      - sbo: SBO:0000247
      - seed.compound: cpd03662
  - !!omap
    - id: bz_c
    - name: benzoate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H5O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H5O2
    - annotation: !!omap
      - biggr: bz_c:-1
      - biocyc: META:BENZOATE
      - chebi:
        - CHEBI:16150
      - hmdb: HMDB01870
      - inchikey: WPYMKLBDIGXBTP-UHFFFAOYSA-M
      - kegg.compound:
        - C00180
        - C00539
      - kegg.drug: D00038
      - metanetx.chemical: MNXM217
      - reactome: R-ALL-159446
      - sbo: SBO:0000247
      - seed.compound: cpd00153
  - !!omap
    - id: bz_e
    - name: benzoate
    - compartment: C_e
    - charge: -1.0
    - formula: C7H5O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H5O2
    - annotation: !!omap
      - biggr: bz_e:-1
      - biocyc: META:BENZOATE
      - chebi:
        - CHEBI:16150
      - hmdb: HMDB01870
      - inchikey: WPYMKLBDIGXBTP-UHFFFAOYSA-M
      - kegg.compound:
        - C00180
        - C00539
      - kegg.drug: D00038
      - metanetx.chemical: MNXM217
      - reactome: R-ALL-159446
      - sbo: SBO:0000247
      - seed.compound: cpd00153
  - !!omap
    - id: ca2_c
    - name: calcium(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Ca
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Ca
    - annotation: !!omap
      - biggr: ca2_c:2
      - biocyc: META:CA+2
      - chebi:
        - CHEBI:29108
      - hmdb: HMDB00464
      - inchikey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N
      - kegg.compound: C00076
      - metanetx.chemical: MNXM128
      - reactome:
        - R-ALL-111875
        - R-ALL-139827
        - R-ALL-1606834
        - R-ALL-167012
        - R-ALL-2855229
        - R-ALL-74016
        - R-ALL-74112
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00063
        - cpd29674
  - !!omap
    - id: ca2_e
    - name: calcium(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Ca
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Ca
    - annotation: !!omap
      - biggr: ca2_e:2
      - biocyc: META:CA+2
      - chebi:
        - CHEBI:29108
      - hmdb: HMDB00464
      - inchikey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N
      - kegg.compound: C00076
      - metanetx.chemical: MNXM128
      - reactome:
        - R-ALL-111875
        - R-ALL-139827
        - R-ALL-1606834
        - R-ALL-167012
        - R-ALL-2855229
        - R-ALL-74016
        - R-ALL-74112
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00063
        - cpd29674
  - !!omap
    - id: ca2_p
    - name: calcium(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Ca
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Ca
    - annotation: !!omap
      - biggr: ca2_p:2
      - biocyc: META:CA+2
      - chebi:
        - CHEBI:29108
      - hmdb: HMDB00464
      - inchikey: BHPQYMZQTOCNFJ-UHFFFAOYSA-N
      - kegg.compound: C00076
      - metanetx.chemical: MNXM128
      - reactome:
        - R-ALL-111875
        - R-ALL-139827
        - R-ALL-1606834
        - R-ALL-167012
        - R-ALL-2855229
        - R-ALL-74016
        - R-ALL-74112
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00063
        - cpd29674
  - !!omap
    - id: cala_c
    - name: N-carbamoyl-beta-alaninate
    - compartment: C_c
    - charge: -1.0
    - formula: C4H7N2O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C4H7N2O3
    - annotation: !!omap
      - biggr: cala_c:-1
      - biocyc: META:3-UREIDO-PROPIONATE
      - chebi:
        - CHEBI:11892
      - hmdb:
        - HMDB00026
        - HMDB62812
      - inchikey: JSJWCHRYRHKBBW-UHFFFAOYSA-M
      - kegg.compound: C02642
      - metanetx.chemical: MNXM802
      - reactome: R-ALL-73588
      - sbo: SBO:0000247
      - seed.compound: cpd01720
  - !!omap
    - id: camp_c
    - name: 3',5'-cyclic AMP(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C10H11N5O6P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H11N5O6P
    - annotation: !!omap
      - biggr: camp_c:-1
      - biocyc: META:CAMP
      - chebi:
        - CHEBI:58165
      - hmdb: HMDB00058
      - inchikey: IVOMOUWHDPKRLL-KQYNXXCUSA-M
      - kegg.compound: C00575
      - metanetx.chemical: MNXM243
      - reactome: R-ALL-30389
      - sbo: SBO:0000247
      - seed.compound: cpd00446
  - !!omap
    - id: carn_c
    - name: carnosine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H14N4O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H14N4O3
    - annotation: !!omap
      - biggr: carn_c:0
      - chebi:
        - CHEBI:57485
        - CHEBI:15727
      - metanetx.chemical: MNXM114412
      - sbo: SBO:0000247
      - seed.compound: cpd15836
  - !!omap
    - id: carn_e
    - name: carnosine
    - compartment: C_e
    - charge: 0.0
    - formula: C9H14N4O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H14N4O3
    - annotation: !!omap
      - biggr: carn_e:0
      - chebi:
        - CHEBI:57485
        - CHEBI:15727
      - metanetx.chemical: MNXM114412
      - sbo: SBO:0000247
      - seed.compound: cpd15836
  - !!omap
    - id: carn_p
    - name: carnosine
    - compartment: C_p
    - charge: 0.0
    - formula: C9H14N4O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H14N4O3
    - annotation: !!omap
      - biggr: carn_p:0
      - chebi:
        - CHEBI:57485
        - CHEBI:15727
      - metanetx.chemical: MNXM114412
      - sbo: SBO:0000247
      - seed.compound: cpd15836
  - !!omap
    - id: cbasp_c
    - name: N-carbamoyl-L-aspartate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H6N2O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H6N2O5
    - annotation: !!omap
      - biggr: cbasp_c:-2
      - biocyc: META:CARBAMYUL-L-ASPARTATE
      - chebi:
        - CHEBI:32814
      - hmdb: HMDB00828
      - inchikey: HLKXYZVTANABHZ-REOHCLBHSA-L
      - kegg.compound: C00438
      - metanetx.chemical: MNXM465
      - reactome: R-ALL-111628
      - sbo: SBO:0000247
      - seed.compound: cpd00343
  - !!omap
    - id: cbp_c
    - name: carbamoyl phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: CH2NO5P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: CH2NO5P
    - annotation: !!omap
      - biggr: cbp_c:-2
      - biocyc: META:CARBAMOYL-P
      - chebi:
        - CHEBI:58228
      - hmdb: HMDB01096
      - inchikey: FFQKYPRQEYGKAF-UHFFFAOYSA-L
      - kegg.compound: C00169
      - metanetx.chemical: MNXM138
      - reactome:
        - R-ALL-111647
        - R-ALL-29676
      - sbo: SBO:0000247
      - seed.compound: cpd00146
  - !!omap
    - id: cd2_c
    - name: cadmium(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Cd
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Cd
    - annotation: !!omap
      - biggr: cd2_c:2
      - biocyc: META:CD+2
      - chebi:
        - CHEBI:48775
      - hmdb: HMDB03638
      - inchikey: WLZRMCYVCSSEQC-UHFFFAOYSA-N
      - kegg.compound: C01413
      - metanetx.chemical: MNXM4505
      - sbo: SBO:0000247
      - seed.compound: cpd01012
  - !!omap
    - id: cd2_e
    - name: cadmium(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Cd
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Cd
    - annotation: !!omap
      - biggr: cd2_e:2
      - biocyc: META:CD+2
      - chebi:
        - CHEBI:48775
      - hmdb: HMDB03638
      - inchikey: WLZRMCYVCSSEQC-UHFFFAOYSA-N
      - kegg.compound: C01413
      - metanetx.chemical: MNXM4505
      - sbo: SBO:0000247
      - seed.compound: cpd01012
  - !!omap
    - id: cd2_p
    - name: cadmium(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Cd
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Cd
    - annotation: !!omap
      - biggr: cd2_p:2
      - biocyc: META:CD+2
      - chebi:
        - CHEBI:48775
      - hmdb: HMDB03638
      - inchikey: WLZRMCYVCSSEQC-UHFFFAOYSA-N
      - kegg.compound: C01413
      - metanetx.chemical: MNXM4505
      - sbo: SBO:0000247
      - seed.compound: cpd01012
  - !!omap
    - id: __iPKB_Clostridiaceae__cdigmp_c
    - name: Cyclic diguanosine monophosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C20H22N10O14P2
    - notes: !!omap
      - FORMULA: C20H22N10O14P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__cdigmp_c:0
      - metanetx.chemical: MNXM148172
      - sbo: SBO:0000247
  - !!omap
    - id: cdp_c
    - name: CDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C9H12N3O11P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C9H12N3O11P2
    - annotation: !!omap
      - biggr: cdp_c:-3
      - biocyc: META:CDP
      - chebi:
        - CHEBI:58069
      - hmdb: HMDB01546
      - inchikey: ZWIADYZPOWUWEW-XVFCMESISA-K
      - kegg.compound: C00112
      - metanetx.chemical: MNXM220
      - sbo: SBO:0000247
      - seed.compound: cpd00096
  - !!omap
    - id: cdpdhdecg_c
    - name: CDP-dipalmitoyl-sn-glycerol(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C44H79N3O15P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C44H79N3O15P2
    - annotation: !!omap
      - biggr: cdpdhdecg_c:-2
      - chebi:
        - CHEBI:77190
      - metanetx.chemical: MNXM3232
      - sbo: SBO:0000247
      - seed.compound: cpd15419
  - !!omap
    - id: __iPKB_Clostridiaceae__cell4_p
    - name: Cellulose (n=4 repeating units)
    - compartment: C_p
    - charge: 0.0
    - formula: C24H42O21
    - notes: !!omap
      - FORMULA: C24H42O21
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__cell4_p:0
      - metanetx.chemical: MNXM147063
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__cellb6p_c
    - name: Cellobiose 6 phosphate C12H21O14P
    - compartment: C_c
    - charge: 0.0
    - formula: C12H23O14P
    - notes: !!omap
      - FORMULA: C12H23O14P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__cellb6p_c:0
      - biocyc: META:CPD-507
      - chebi: CHEBI:2233
      - inchikey: ITPHOIFCAFNCLL-QRZGKKJRSA-L
      - kegg.compound: C04534
      - kegg.glycan: G10518
      - metanetx.chemical: MNXM4419
      - sbo: SBO:0000247
      - seed.compound: cpd02760
  - !!omap
    - id: cellb_c
    - name: cellobiose
    - compartment: C_c
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: cellb_c:0
      - biocyc: META:CELLOBIOSE
      - chebi:
        - CHEBI:17057
      - hmdb: HMDB00055
      - inchikey: GUBGYTABKSRVRQ-QRZGKKJRSA-N
      - kegg.compound:
        - C00185
        - C06421
        - C06422
      - kegg.glycan: G00289
      - metanetx.chemical: MNXM1142
      - sbo: SBO:0000247
      - seed.compound: cpd03845
  - !!omap
    - id: cellb_e
    - name: cellobiose
    - compartment: C_e
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: cellb_e:0
      - biocyc: META:CELLOBIOSE
      - chebi:
        - CHEBI:17057
      - hmdb: HMDB00055
      - inchikey: GUBGYTABKSRVRQ-QRZGKKJRSA-N
      - kegg.compound:
        - C00185
        - C06421
        - C06422
      - kegg.glycan: G00289
      - metanetx.chemical: MNXM1142
      - sbo: SBO:0000247
      - seed.compound: cpd03845
  - !!omap
    - id: cellb_p
    - name: cellobiose
    - compartment: C_p
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: cellb_p:0
      - biocyc: META:CELLOBIOSE
      - chebi:
        - CHEBI:17057
      - hmdb: HMDB00055
      - inchikey: GUBGYTABKSRVRQ-QRZGKKJRSA-N
      - kegg.compound:
        - C00185
        - C06421
        - C06422
      - kegg.glycan: G00289
      - metanetx.chemical: MNXM1142
      - sbo: SBO:0000247
      - seed.compound: cpd03845
  - !!omap
    - id: cgly_c
    - name: L-cysteinylglycine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10N2O3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10N2O3S
    - annotation: !!omap
      - biggr: cgly_c:0
      - biocyc: META:CYS-GLY
      - chebi:
        - CHEBI:61694
        - CHEBI:4047
      - hmdb:
        - HMDB00078
        - HMDB28775
      - inchikey: ZUKPVRWZDMRIEO-VKHMYHEASA-N
      - kegg.compound: C01419
      - metanetx.chemical: MNXM683
      - reactome:
        - R-ALL-1247904
        - R-ALL-1247934
      - sbo: SBO:0000247
      - seed.compound: cpd01017
  - !!omap
    - id: cgly_e
    - name: L-cysteinylglycine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10N2O3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10N2O3S
    - annotation: !!omap
      - biggr: cgly_e:0
      - biocyc: META:CYS-GLY
      - chebi:
        - CHEBI:61694
        - CHEBI:4047
      - hmdb:
        - HMDB00078
        - HMDB28775
      - inchikey: ZUKPVRWZDMRIEO-VKHMYHEASA-N
      - kegg.compound: C01419
      - metanetx.chemical: MNXM683
      - reactome:
        - R-ALL-1247904
        - R-ALL-1247934
      - sbo: SBO:0000247
      - seed.compound: cpd01017
  - !!omap
    - id: ch4s_c
    - name: methanethiol
    - compartment: C_c
    - charge: 0.0
    - formula: CH4S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4S
    - annotation: !!omap
      - biggr: ch4s_c:0
      - biocyc: META:CPD-7671
      - chebi:
        - CHEBI:16007
      - hmdb: HMDB03227
      - inchikey: LSDPWZHWYPCBBB-UHFFFAOYSA-N
      - kegg.compound: C00409
      - metanetx.chemical: MNXM652
      - sbo: SBO:0000247
      - seed.compound: cpd00324
  - !!omap
    - id: chol_c
    - name: choline
    - compartment: C_c
    - charge: 1.0
    - formula: C5H14NO
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C5H14NO
    - annotation: !!omap
      - biggr: chol_c:1
      - biocyc: META:CHOLINE
      - chebi:
        - CHEBI:15354
      - hmdb: HMDB00097
      - inchikey: OEYIOHPDSNJKLS-UHFFFAOYSA-N
      - kegg.compound: C00114
      - kegg.drug:
        - D07690
        - D10498
      - metanetx.chemical: MNXM90
      - reactome:
        - R-ALL-264618
        - R-ALL-264638
        - R-ALL-6798162
      - sbo: SBO:0000247
      - seed.compound: cpd00098
  - !!omap
    - id: chol_e
    - name: choline
    - compartment: C_e
    - charge: 1.0
    - formula: C5H14NO
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C5H14NO
    - annotation: !!omap
      - biggr: chol_e:1
      - biocyc: META:CHOLINE
      - chebi:
        - CHEBI:15354
      - hmdb: HMDB00097
      - inchikey: OEYIOHPDSNJKLS-UHFFFAOYSA-N
      - kegg.compound: C00114
      - kegg.drug:
        - D07690
        - D10498
      - metanetx.chemical: MNXM90
      - reactome:
        - R-ALL-264618
        - R-ALL-264638
        - R-ALL-6798162
      - sbo: SBO:0000247
      - seed.compound: cpd00098
  - !!omap
    - id: chols_c
    - name: choline sulfate
    - compartment: C_c
    - charge: 0.0
    - formula: C5H13NO4S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H13NO4S
    - annotation: !!omap
      - biggr: chols_c:0
      - biocyc: META:CPD-543
      - chebi:
        - CHEBI:16822
      - inchikey: WXCQAWGXWVRCGP-UHFFFAOYSA-N
      - kegg.compound: C00919
      - metanetx.chemical: MNXM1547
      - sbo: SBO:0000247
      - seed.compound: cpd00681
  - !!omap
    - id: chols_e
    - name: choline sulfate
    - compartment: C_e
    - charge: 0.0
    - formula: C5H13NO4S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H13NO4S
    - annotation: !!omap
      - biggr: chols_e:0
      - biocyc: META:CPD-543
      - chebi:
        - CHEBI:16822
      - inchikey: WXCQAWGXWVRCGP-UHFFFAOYSA-N
      - kegg.compound: C00919
      - metanetx.chemical: MNXM1547
      - sbo: SBO:0000247
      - seed.compound: cpd00681
  - !!omap
    - id: chor_c
    - name: chorismate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H8O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H8O6
    - annotation: !!omap
      - biggr: chor_c:-2
      - biocyc: META:CHORISMATE
      - chebi:
        - CHEBI:29748
      - hmdb: HMDB12199
      - inchikey: WTFXTQVDAKGDEY-HTQZYQBOSA-L
      - kegg.compound: C00251
      - metanetx.chemical: MNXM337
      - reactome: R-ALL-964856
      - sbo: SBO:0000247
      - seed.compound: cpd00216
  - !!omap
    - id: chtbs6p_c
    - name: diacetylchitobiose-6'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C16H27N2O14P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C16H27N2O14P
    - annotation: !!omap
      - biggr: chtbs6p_c:-2
      - biocyc: META:DIACETYLCHITOBIOSE-6-PHOSPHATE
      - chebi:
        - CHEBI:64883
      - inchikey: KYKNQNQCPWDNAK-CBTAGEKQSA-L
      - kegg.compound: C21152
      - metanetx.chemical: MNXM11353
      - sbo: SBO:0000247
      - seed.compound: cpd26854
  - !!omap
    - id: cit_c
    - name: citrate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C6H5O7
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H5O7
    - annotation: !!omap
      - biggr: cit_c:-3
      - biocyc: META:CIT
      - chebi:
        - CHEBI:16947
      - hmdb: HMDB00094
      - inchikey: KRKNYBCHXYNGOX-UHFFFAOYSA-K
      - kegg.compound: C00158
      - kegg.drug: D00037
      - metanetx.chemical: MNXM131
      - reactome:
        - R-ALL-29654
        - R-ALL-433138
        - R-ALL-76190
      - sbo: SBO:0000247
      - seed.compound: cpd00137
  - !!omap
    - id: cit_e
    - name: citrate(3-)
    - compartment: C_e
    - charge: -3.0
    - formula: C6H5O7
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H5O7
    - annotation: !!omap
      - biggr: cit_e:-3
      - biocyc: META:CIT
      - chebi:
        - CHEBI:16947
      - hmdb: HMDB00094
      - inchikey: KRKNYBCHXYNGOX-UHFFFAOYSA-K
      - kegg.compound: C00158
      - kegg.drug: D00037
      - metanetx.chemical: MNXM131
      - reactome:
        - R-ALL-29654
        - R-ALL-433138
        - R-ALL-76190
      - sbo: SBO:0000247
      - seed.compound: cpd00137
  - !!omap
    - id: citr__L_c
    - name: L-citrulline
    - compartment: C_c
    - charge: 0.0
    - formula: C6H13N3O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H13N3O3
    - annotation: !!omap
      - biggr: citr__L_c:0
      - biocyc: META:L-CITRULLINE
      - chebi:
        - CHEBI:57743
        - CHEBI:16349
      - hmdb: HMDB00904
      - inchikey: RHGKLRLOHDJJDR-BYPYZUCNSA-N
      - kegg.compound: C00327
      - kegg.drug: D07706
      - metanetx.chemical: MNXM211
      - reactome:
        - R-ALL-113567
        - R-ALL-29968
      - sbo: SBO:0000247
      - seed.compound: cpd00274
  - !!omap
    - id: cl_c
    - name: chloride
    - compartment: C_c
    - charge: -1.0
    - formula: Cl
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: Cl
    - annotation: !!omap
      - biggr: cl_c:-1
      - biocyc:
        - META:CL-
        - META:HCL
      - chebi:
        - CHEBI:17996
      - hmdb:
        - HMDB00492
        - HMDB02073
        - HMDB02162
        - HMDB02306
      - inchikey: VEXZGXHMUGYJMC-UHFFFAOYSA-M
      - kegg.compound:
        - C00698
        - C01327
      - kegg.drug: D02057
      - metanetx.chemical: MNXM43
      - reactome:
        - R-ALL-188972
        - R-ALL-2730999
        - R-ALL-2731008
        - R-ALL-2731020
        - R-ALL-29572
        - R-ALL-3301973
        - R-ALL-352022
      - sbo: SBO:0000247
      - seed.compound: cpd00099
  - !!omap
    - id: cl_e
    - name: chloride
    - compartment: C_e
    - charge: -1.0
    - formula: Cl
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: Cl
    - annotation: !!omap
      - biggr: cl_e:-1
      - biocyc:
        - META:CL-
        - META:HCL
      - chebi:
        - CHEBI:17996
      - hmdb:
        - HMDB00492
        - HMDB02073
        - HMDB02162
        - HMDB02306
      - inchikey: VEXZGXHMUGYJMC-UHFFFAOYSA-M
      - kegg.compound:
        - C00698
        - C01327
      - kegg.drug: D02057
      - metanetx.chemical: MNXM43
      - reactome:
        - R-ALL-188972
        - R-ALL-2730999
        - R-ALL-2731008
        - R-ALL-2731020
        - R-ALL-29572
        - R-ALL-3301973
        - R-ALL-352022
      - sbo: SBO:0000247
      - seed.compound: cpd00099
  - !!omap
    - id: clpn160_c
    - name: Cardiolipin (tetrahexadecanoyl, n-C16:0)
    - compartment: C_c
    - charge: -2.0
    - formula: C73H140O17P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C73H140O17P2
    - annotation: !!omap
      - biggr: clpn160_c:-2
      - biocyc: META:CPD-12824
      - chebi: CHEBI:104586
      - hmdb: HMDB56387
      - inchikey: GRTNLBQYBYZCCM-ULKDXPJMSA-L
      - lipidmaps: LMGP12010007
      - metanetx.chemical: MNXM45654
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15428
        - cpd23601
  - !!omap
    - id: clpn160_p
    - name: Cardiolipin (tetrahexadecanoyl, n-C16:0)
    - compartment: C_p
    - charge: -2.0
    - formula: C73H140O17P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C73H140O17P2
    - annotation: !!omap
      - biggr: clpn160_p:-2
      - biocyc: META:CPD-12824
      - chebi: CHEBI:104586
      - hmdb: HMDB56387
      - inchikey: GRTNLBQYBYZCCM-ULKDXPJMSA-L
      - lipidmaps: LMGP12010007
      - metanetx.chemical: MNXM45654
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15428
        - cpd23601
  - !!omap
    - id: __iPKB_Clostridiaceae__cmcbtt_c
    - name: Carboxymycobactin T (R=8 carbon, final carbon is carboxyl group)
    - compartment: C_c
    - charge: 0.0
    - formula: C33H48N5O13
    - notes: !!omap
      - FORMULA: C33H48N5O13
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__cmcbtt_c:0
      - metanetx.chemical: MNXM8372
      - sbo: SBO:0000247
      - seed.compound: cpd15940
  - !!omap
    - id: cmp_c
    - name: cytidine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H12N3O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H12N3O8P
    - annotation: !!omap
      - biggr: cmp_c:-2
      - biocyc: META:CMP
      - chebi:
        - CHEBI:60377
      - hmdb: HMDB00095
      - inchikey: IERHLVCPSMICTF-XVFCMESISA-L
      - kegg.compound: C00055
      - kegg.glycan: G10621
      - metanetx.chemical: MNXM31
      - reactome:
        - R-ALL-109395
        - R-ALL-1524067
        - R-ALL-727810
      - sbo: SBO:0000247
      - seed.compound: cpd00046
  - !!omap
    - id: co2_c
    - name: carbon dioxide
    - compartment: C_c
    - charge: 0.0
    - formula: CO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CO2
    - annotation: !!omap
      - biggr: co2_c:0
      - biocyc: META:CARBON-DIOXIDE
      - chebi:
        - CHEBI:16526
      - hmdb: HMDB01967
      - inchikey: CURLTUGMZLYLDI-UHFFFAOYSA-N
      - kegg.compound: C00011
      - kegg.drug: D00004
      - metanetx.chemical: MNXM13
      - reactome:
        - R-ALL-1132345
        - R-ALL-113528
        - R-ALL-1237009
        - R-ALL-159751
        - R-ALL-159942
        - R-ALL-189480
        - R-ALL-29376
        - R-ALL-389536
        - R-ALL-5668565
      - sbo: SBO:0000247
      - seed.compound: cpd00011
  - !!omap
    - id: co2_e
    - name: carbon dioxide
    - compartment: C_e
    - charge: 0.0
    - formula: CO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CO2
    - annotation: !!omap
      - biggr: co2_e:0
      - biocyc: META:CARBON-DIOXIDE
      - chebi:
        - CHEBI:16526
      - hmdb: HMDB01967
      - inchikey: CURLTUGMZLYLDI-UHFFFAOYSA-N
      - kegg.compound: C00011
      - kegg.drug: D00004
      - metanetx.chemical: MNXM13
      - reactome:
        - R-ALL-1132345
        - R-ALL-113528
        - R-ALL-1237009
        - R-ALL-159751
        - R-ALL-159942
        - R-ALL-189480
        - R-ALL-29376
        - R-ALL-389536
        - R-ALL-5668565
      - sbo: SBO:0000247
      - seed.compound: cpd00011
  - !!omap
    - id: co2_p
    - name: carbon dioxide
    - compartment: C_p
    - charge: 0.0
    - formula: CO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CO2
    - annotation: !!omap
      - biggr: co2_p:0
      - biocyc: META:CARBON-DIOXIDE
      - chebi:
        - CHEBI:16526
      - hmdb: HMDB01967
      - inchikey: CURLTUGMZLYLDI-UHFFFAOYSA-N
      - kegg.compound: C00011
      - kegg.drug: D00004
      - metanetx.chemical: MNXM13
      - reactome:
        - R-ALL-1132345
        - R-ALL-113528
        - R-ALL-1237009
        - R-ALL-159751
        - R-ALL-159942
        - R-ALL-189480
        - R-ALL-29376
        - R-ALL-389536
        - R-ALL-5668565
      - sbo: SBO:0000247
      - seed.compound: cpd00011
  - !!omap
    - id: co_c
    - name: carbon monoxide
    - compartment: C_c
    - charge: 0.0
    - formula: CO
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CO
    - annotation: !!omap
      - biggr: co_c:0
      - biocyc: META:CARBON-MONOXIDE
      - chebi:
        - CHEBI:17245
      - hmdb: HMDB01361
      - inchikey: UGFAIRIUMAVXCW-UHFFFAOYSA-N
      - kegg.compound: C00237
      - kegg.drug:
        - D03398
        - D09706
      - metanetx.chemical: MNXM10881
      - reactome: R-ALL-189385
      - sbo: SBO:0000247
      - seed.compound: cpd00204
  - !!omap
    - id: co_e
    - name: carbon monoxide
    - compartment: C_e
    - charge: 0.0
    - formula: CO
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CO
    - annotation: !!omap
      - biggr: co_e:0
      - biocyc: META:CARBON-MONOXIDE
      - chebi:
        - CHEBI:17245
      - hmdb: HMDB01361
      - inchikey: UGFAIRIUMAVXCW-UHFFFAOYSA-N
      - kegg.compound: C00237
      - kegg.drug:
        - D03398
        - D09706
      - metanetx.chemical: MNXM10881
      - reactome: R-ALL-189385
      - sbo: SBO:0000247
      - seed.compound: cpd00204
  - !!omap
    - id: co_p
    - name: carbon monoxide
    - compartment: C_p
    - charge: 0.0
    - formula: CO
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CO
    - annotation: !!omap
      - biggr: co_p:0
      - biocyc: META:CARBON-MONOXIDE
      - chebi:
        - CHEBI:17245
      - hmdb: HMDB01361
      - inchikey: UGFAIRIUMAVXCW-UHFFFAOYSA-N
      - kegg.compound: C00237
      - kegg.drug:
        - D03398
        - D09706
      - metanetx.chemical: MNXM10881
      - reactome: R-ALL-189385
      - sbo: SBO:0000247
      - seed.compound: cpd00204
  - !!omap
    - id: coa_c
    - name: coenzyme A(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C21H32N7O16P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C21H32N7O16P3S
    - annotation: !!omap
      - biggr: coa_c:-4
      - biocyc:
        - META:CO-A
        - META:COA-GROUP
      - chebi:
        - CHEBI:57287
      - hmdb:
        - HMDB01423
        - HMDB62184
      - inchikey: RGJOEKWQDUBAIZ-IBOSZNHHSA-J
      - kegg.compound: C00010
      - metanetx.chemical: MNXM12
      - reactome:
        - R-ALL-162743
        - R-ALL-1678675
        - R-ALL-193514
        - R-ALL-2485002
        - R-ALL-29374
        - R-ALL-76194
        - R-ALL-8939024
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00010
        - cpd22528
  - !!omap
    - id: cobalt2_c
    - name: cobalt(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Co
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Co
    - annotation: !!omap
      - biggr: cobalt2_c:2
      - biocyc: META:CO+2
      - chebi:
        - CHEBI:48828
      - hmdb: HMDB00608
      - inchikey: XLJKHNWPARRRJB-UHFFFAOYSA-N
      - kegg.compound: C00175
      - metanetx.chemical: MNXM90960
      - sbo: SBO:0000247
      - seed.compound: cpd00149
  - !!omap
    - id: cobalt2_e
    - name: cobalt(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Co
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Co
    - annotation: !!omap
      - biggr: cobalt2_e:2
      - biocyc: META:CO+2
      - chebi:
        - CHEBI:48828
      - hmdb: HMDB00608
      - inchikey: XLJKHNWPARRRJB-UHFFFAOYSA-N
      - kegg.compound: C00175
      - metanetx.chemical: MNXM90960
      - sbo: SBO:0000247
      - seed.compound: cpd00149
  - !!omap
    - id: cobalt2_p
    - name: cobalt(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Co
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Co
    - annotation: !!omap
      - biggr: cobalt2_p:2
      - biocyc: META:CO+2
      - chebi:
        - CHEBI:48828
      - hmdb: HMDB00608
      - inchikey: XLJKHNWPARRRJB-UHFFFAOYSA-N
      - kegg.compound: C00175
      - metanetx.chemical: MNXM90960
      - sbo: SBO:0000247
      - seed.compound: cpd00149
  - !!omap
    - id: cpppg3_c
    - name: coproporphyrinogen III(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C36H40N4O8
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C36H40N4O8
    - annotation: !!omap
      - biggr: cpppg3_c:-4
      - biocyc: META:COPROPORPHYRINOGEN_III
      - chebi:
        - CHEBI:57309
      - hmdb: HMDB01261
      - inchikey: NIUVHXTXUXOFEB-UHFFFAOYSA-J
      - kegg.compound: C03263
      - metanetx.chemical: MNXM410
      - reactome:
        - R-ALL-189411
        - R-ALL-189455
      - sbo: SBO:0000247
      - seed.compound: cpd02083
  - !!omap
    - id: __iPKB_Clostridiaceae__cro4_c
    - name: Chromate
    - compartment: C_c
    - charge: 0.0
    - formula: O2
    - notes: !!omap
      - FORMULA: O2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__cro4_c:0
      - biocyc: META:CPD-4422
      - chebi:
        - CHEBI:23231
        - CHEBI:29393
        - CHEBI:33143
        - CHEBI:33144
        - CHEBI:35404
      - inchikey: ZCDOYSPFYFSLEW-UHFFFAOYSA-N
      - metanetx.chemical: MNXM46638
      - sbo: SBO:0000247
      - seed.compound: cpd11595
  - !!omap
    - id: __iPKB_Clostridiaceae__cro4_p
    - name: Chromate
    - compartment: C_p
    - charge: 0.0
    - formula: O2
    - notes: !!omap
      - FORMULA: O2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__cro4_p:0
      - biocyc: META:CPD-4422
      - chebi:
        - CHEBI:23231
        - CHEBI:29393
        - CHEBI:33143
        - CHEBI:33144
        - CHEBI:35404
      - inchikey: ZCDOYSPFYFSLEW-UHFFFAOYSA-N
      - metanetx.chemical: MNXM46638
      - sbo: SBO:0000247
      - seed.compound: cpd11595
  - !!omap
    - id: csn_c
    - name: cytosine
    - compartment: C_c
    - charge: 0.0
    - formula: C4H5N3O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H5N3O
    - annotation: !!omap
      - biggr: csn_c:0
      - biocyc: META:CYTOSINE
      - chebi:
        - CHEBI:16040
      - hmdb: HMDB00630
      - inchikey: OPTASPLRGRRNAP-UHFFFAOYSA-N
      - kegg.compound: C00380
      - metanetx.chemical: MNXM761
      - sbo: SBO:0000247
      - seed.compound: cpd00307
  - !!omap
    - id: ctp_c
    - name: CTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C9H12N3O14P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C9H12N3O14P3
    - annotation: !!omap
      - biggr: ctp_c:-4
      - biocyc: META:CTP
      - chebi:
        - CHEBI:37563
      - hmdb: HMDB00082
      - inchikey: PCDQPRRSZKQHHS-XVFCMESISA-J
      - kegg.compound: C00063
      - metanetx.chemical: MNXM63
      - reactome:
        - R-ALL-110577
        - R-ALL-110614
        - R-ALL-29470
      - sbo: SBO:0000247
      - seed.compound: cpd00052
  - !!omap
    - id: cu2_c
    - name: copper(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Cu
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Cu
    - annotation: !!omap
      - biggr: cu2_c:2
      - biocyc: META:CU+2
      - chebi:
        - CHEBI:29036
      - hmdb: HMDB00657
      - inchikey: JPVYNHNXODAKFH-UHFFFAOYSA-N
      - kegg.compound: C00070
      - metanetx.chemical: MNXM632
      - reactome:
        - R-ALL-209799
        - R-ALL-437295
        - R-ALL-936901
      - sbo: SBO:0000247
      - seed.compound: cpd00058
  - !!omap
    - id: cu2_e
    - name: copper(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Cu
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Cu
    - annotation: !!omap
      - biggr: cu2_e:2
      - biocyc: META:CU+2
      - chebi:
        - CHEBI:29036
      - hmdb: HMDB00657
      - inchikey: JPVYNHNXODAKFH-UHFFFAOYSA-N
      - kegg.compound: C00070
      - metanetx.chemical: MNXM632
      - reactome:
        - R-ALL-209799
        - R-ALL-437295
        - R-ALL-936901
      - sbo: SBO:0000247
      - seed.compound: cpd00058
  - !!omap
    - id: cu2_p
    - name: copper(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Cu
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Cu
    - annotation: !!omap
      - biggr: cu2_p:2
      - biocyc: META:CU+2
      - chebi:
        - CHEBI:29036
      - hmdb: HMDB00657
      - inchikey: JPVYNHNXODAKFH-UHFFFAOYSA-N
      - kegg.compound: C00070
      - metanetx.chemical: MNXM632
      - reactome:
        - R-ALL-209799
        - R-ALL-437295
        - R-ALL-936901
      - sbo: SBO:0000247
      - seed.compound: cpd00058
  - !!omap
    - id: cys__L_c
    - name: L-cysteine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C3H7NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__L_c:0
      - biocyc: META:CYS
      - chebi:
        - CHEBI:35235
        - CHEBI:17561
      - hmdb: HMDB00574
      - inchikey: XUJNEKJLAYXESH-REOHCLBHSA-N
      - kegg.compound:
        - C00097
        - C00736
      - kegg.drug: D00026
      - metanetx.chemical: MNXM55
      - reactome:
        - R-ALL-111707
        - R-ALL-352016
        - R-ALL-379721
        - R-ALL-5668576
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00084
        - cpd00547
  - !!omap
    - id: cys__L_e
    - name: L-cysteine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C3H7NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__L_e:0
      - biocyc: META:CYS
      - chebi:
        - CHEBI:35235
        - CHEBI:17561
      - hmdb: HMDB00574
      - inchikey: XUJNEKJLAYXESH-REOHCLBHSA-N
      - kegg.compound:
        - C00097
        - C00736
      - kegg.drug: D00026
      - metanetx.chemical: MNXM55
      - reactome:
        - R-ALL-111707
        - R-ALL-352016
        - R-ALL-379721
        - R-ALL-5668576
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00084
        - cpd00547
  - !!omap
    - id: cys__L_p
    - name: L-cysteine zwitterion
    - compartment: C_p
    - charge: 0.0
    - formula: C3H7NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO2S
    - annotation: !!omap
      - biggr: cys__L_p:0
      - biocyc: META:CYS
      - chebi:
        - CHEBI:35235
        - CHEBI:17561
      - hmdb: HMDB00574
      - inchikey: XUJNEKJLAYXESH-REOHCLBHSA-N
      - kegg.compound:
        - C00097
        - C00736
      - kegg.drug: D00026
      - metanetx.chemical: MNXM55
      - reactome:
        - R-ALL-111707
        - R-ALL-352016
        - R-ALL-379721
        - R-ALL-5668576
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00084
        - cpd00547
  - !!omap
    - id: cyst__L_c
    - name: L-cystathionine dizwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C7H14N2O4S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H14N2O4S
    - annotation: !!omap
      - biggr: cyst__L_c:0
      - biocyc: META:L-CYSTATHIONINE
      - chebi:
        - CHEBI:58161
        - CHEBI:17482
      - hmdb:
        - HMDB00099
        - HMDB03614
      - inchikey: ILRYLPWNYFXEMH-WHFBIAKZSA-N
      - kegg.compound: C02291
      - metanetx.chemical: MNXM319
      - reactome: R-ALL-1614518
      - sbo: SBO:0000247
      - seed.compound: cpd19019
  - !!omap
    - id: cytd_c
    - name: cytidine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H13N3O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H13N3O5
    - annotation: !!omap
      - biggr: cytd_c:0
      - biocyc: META:CYTIDINE
      - chebi:
        - CHEBI:17562
      - hmdb: HMDB00089
      - inchikey: UHDGCWIWMRVCDJ-XVFCMESISA-N
      - kegg.compound: C00475
      - kegg.drug: D07769
      - metanetx.chemical: MNXM338
      - sbo: SBO:0000247
      - seed.compound: cpd00367
  - !!omap
    - id: __iPKB_Clostridiaceae__d23hb_e
    - name: 2,3-dihydroxybenzoate
    - compartment: C_e
    - charge: 0.0
    - formula: C7H6O4
    - notes: !!omap
      - FORMULA: C7H6O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__d23hb_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__dachi_e
    - name: Diacetylchitobiose
    - compartment: C_e
    - charge: 0.0
    - formula: C16H28N2O11
    - notes: !!omap
      - FORMULA: C16H28N2O11
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dachi_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: dad_2_c
    - name: 2'-deoxyadenosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H13N5O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H13N5O3
    - annotation: !!omap
      - biggr: dad_2_c:0
      - biocyc: META:DEOXYADENOSINE
      - chebi:
        - CHEBI:17256
      - hmdb:
        - HMDB00101
        - HMDB05778
        - HMDB11722
      - inchikey: OLXZPDWKRNYJJZ-RRKCRQDMSA-N
      - kegg.compound: C00559
      - metanetx.chemical: MNXM625
      - sbo: SBO:0000247
      - seed.compound: cpd00438
  - !!omap
    - id: dad_5_c
    - name: 5'-deoxyadenosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H13N5O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H13N5O3
    - annotation: !!omap
      - biggr: dad_5_c:0
      - biocyc: META:CH33ADO
      - chebi:
        - CHEBI:17319
      - hmdb: HMDB01983
      - inchikey: XGYIMTFOTBMPFP-KQYNXXCUSA-N
      - kegg.compound: C05198
      - metanetx.chemical: MNXM316
      - reactome:
        - R-ALL-1130791
        - R-ALL-947703
      - sbo: SBO:0000247
      - seed.compound: cpd03091
  - !!omap
    - id: dadp_c
    - name: dADP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H12N5O9P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H12N5O9P2
    - annotation: !!omap
      - biggr: dadp_c:-3
      - biocyc: META:DADP
      - chebi:
        - CHEBI:57667
      - hmdb: HMDB01508
      - inchikey: DAEAPNUQQAICNR-RRKCRQDMSA-K
      - kegg.compound: C00206
      - metanetx.chemical: MNXM374
      - reactome: R-ALL-500087
      - sbo: SBO:0000247
      - seed.compound: cpd00177
  - !!omap
    - id: damp_c
    - name: 2'-deoxyadenosine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H12N5O6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H12N5O6P
    - annotation: !!omap
      - biggr: damp_c:-2
      - biocyc: META:DAMP
      - chebi:
        - CHEBI:58245
      - hmdb: HMDB00905
      - inchikey: KHWCHTKSEGGWEX-RRKCRQDMSA-L
      - kegg.compound: C00360
      - metanetx.chemical: MNXM432
      - reactome:
        - R-ALL-109386
        - R-ALL-500088
      - sbo: SBO:0000247
      - seed.compound: cpd00294
  - !!omap
    - id: datp_c
    - name: dATP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H12N5O12P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H12N5O12P3
    - annotation: !!omap
      - biggr: datp_c:-4
      - biocyc: META:DATP
      - chebi:
        - CHEBI:61404
      - hmdb: HMDB01532
      - inchikey: SUYVUBYJARFZHO-RRKCRQDMSA-J
      - kegg.compound: C00131
      - metanetx.chemical: MNXM286
      - reactome: R-ALL-110644
      - sbo: SBO:0000247
      - seed.compound: cpd00115
  - !!omap
    - id: __iPKB_Clostridiaceae__db4p_c
    - name: 3,4-dihydroxy-2-butanone 4-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C4H8O6P
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C4H8O6P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__db4p_c:0
      - chebi: CHEBI:50606
      - inchikey: OKYHYXLCTGGOLM-UHFFFAOYSA-L
      - kegg.compound: C15556
      - metanetx.chemical: MNXM2323
      - sbo: SBO:0000247
      - seed.compound: cpd11225
  - !!omap
    - id: dc2coa_c
    - name: trans-dec-2-enoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C31H48N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C31H48N7O17P3S
    - annotation: !!omap
      - biggr: dc2coa_c:-4
      - biocyc: META:T2-DECENOYL-COA
      - chebi:
        - CHEBI:61406
      - hmdb: HMDB03948
      - inchikey: MGNBGCRQQFMNBM-YJHHLLFWSA-J
      - kegg.compound: C05275
      - lipidmaps:
        - LMFA07050023
        - LMFA07050175
        - LMFA07050391
      - metanetx.chemical: MNXM580
      - reactome: R-ALL-77343
      - sbo: SBO:0000247
      - seed.compound: cpd03129
  - !!omap
    - id: __iPKB_Clostridiaceae__dcamp_c
    - name: N6-(1,2-Dicarboxyethyl)-AMP
    - compartment: C_c
    - charge: 0.0
    - formula: C14H14N5O11P
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C14H14N5O11P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dcamp_c:0
      - biocyc: META:ADENYLOSUCC
      - chebi:
        - CHEBI:12656
        - CHEBI:12657
        - CHEBI:15919
        - CHEBI:21857
        - CHEBI:22262
        - CHEBI:39869
        - CHEBI:57567
        - CHEBI:7405
      - hmdb:
        - HMDB00536
        - HMDB01332
        - HMDB11633
        - HMDB59653
      - inchikey: OFBHPPMPBOJXRT-DPXQIYNJSA-J
      - kegg.compound: C03794
      - metanetx.chemical: MNXM565
      - reactome: R-ALL-35141
      - sbo: SBO:0000247
      - seed.compound: cpd02375
  - !!omap
    - id: __iPKB_Clostridiaceae__dccoa_c
    - name: Decanoyl CoA C31H50N7O17P3S
    - compartment: C_c
    - charge: 0.0
    - formula: C31H50N7O17P3S
    - notes: !!omap
      - FORMULA: C31H50N7O17P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dccoa_c:0
      - biocyc: META:CPD-10267
      - chebi:
        - CHEBI:23575
        - CHEBI:28493
        - CHEBI:4348
        - CHEBI:61430
      - inchikey: CNKJPHSEFDPYDB-HSJNEKGZSA-J
      - kegg.compound: C05274
      - lipidmaps:
        - LMFA07050022
        - LMFA07050313
      - metanetx.chemical: MNXM486
      - reactome: R-ALL-77308
      - sbo: SBO:0000247
      - seed.compound: cpd03128
  - !!omap
    - id: dcdp_c
    - name: dCDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C9H12N3O10P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C9H12N3O10P2
    - annotation: !!omap
      - biggr: dcdp_c:-3
      - biocyc: META:DCDP
      - chebi:
        - CHEBI:58593
      - hmdb: HMDB01245
      - inchikey: FTDHDKPUHBLBTL-SHYZEUOFSA-K
      - kegg.compound: C00705
      - metanetx.chemical: MNXM411
      - sbo: SBO:0000247
      - seed.compound: cpd00533
  - !!omap
    - id: dcmp_c
    - name: 2'-deoxycytosine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H12N3O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H12N3O7P
    - annotation: !!omap
      - biggr: dcmp_c:-2
      - biocyc: META:DCMP
      - chebi:
        - CHEBI:57566
      - hmdb: HMDB01202
      - inchikey: NCMVOABPESMRCP-SHYZEUOFSA-L
      - kegg.compound: C00239
      - metanetx.chemical: MNXM266
      - reactome:
        - R-ALL-109378
        - R-ALL-500828
      - sbo: SBO:0000247
      - seed.compound: cpd00206
  - !!omap
    - id: dctp_c
    - name: dCTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C9H12N3O13P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C9H12N3O13P3
    - annotation: !!omap
      - biggr: dctp_c:-4
      - biocyc: META:DCTP
      - chebi:
        - CHEBI:61481
      - hmdb: HMDB00998
      - inchikey: RGWHQCVHVJXOKC-SHYZEUOFSA-J
      - kegg.compound: C00458
      - metanetx.chemical: MNXM360
      - sbo: SBO:0000247
      - seed.compound: cpd00356
  - !!omap
    - id: dcyt_c
    - name: 2'-deoxycytidine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H13N3O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H13N3O4
    - annotation: !!omap
      - biggr: dcyt_c:0
      - biocyc: META:DEOXYCYTIDINE
      - chebi:
        - CHEBI:15698
      - hmdb: HMDB00014
      - inchikey: CKTSBUTUHBMZGZ-SHYZEUOFSA-N
      - kegg.compound: C00881
      - metanetx.chemical: MNXM704
      - reactome: R-ALL-500829
      - sbo: SBO:0000247
      - seed.compound: cpd00654
  - !!omap
    - id: dcyt_e
    - name: 2'-deoxycytidine
    - compartment: C_e
    - charge: 0.0
    - formula: C9H13N3O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H13N3O4
    - annotation: !!omap
      - biggr: dcyt_e:0
      - biocyc: META:DEOXYCYTIDINE
      - chebi:
        - CHEBI:15698
      - hmdb: HMDB00014
      - inchikey: CKTSBUTUHBMZGZ-SHYZEUOFSA-N
      - kegg.compound: C00881
      - metanetx.chemical: MNXM704
      - reactome: R-ALL-500829
      - sbo: SBO:0000247
      - seed.compound: cpd00654
  - !!omap
    - id: __iPKB_Clostridiaceae__dec4_2_coa_c
    - name: 2 trans 4 cis decadienoyl CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C31H46N7O17P3S
    - notes: !!omap
      - FORMULA: C31H46N7O17P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dec4_2_coa_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__dgal6p_c
    - name: D-Galactose 6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O9P
    - notes: !!omap
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dgal6p_c:0
      - metanetx.chemical: MNXM92233
      - sbo: SBO:0000247
  - !!omap
    - id: dgdp_c
    - name: dGDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H12N5O10P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H12N5O10P2
    - annotation: !!omap
      - biggr: dgdp_c:-3
      - biocyc: META:DGDP
      - chebi:
        - CHEBI:58595
      - hmdb: HMDB00960
      - inchikey: CIKGWCTVFSRMJU-KVQBGUIXSA-K
      - kegg.compound: C00361
      - metanetx.chemical: MNXM436
      - reactome: R-ALL-500077
      - sbo: SBO:0000247
      - seed.compound: cpd00295
  - !!omap
    - id: dgmp_c
    - name: 2'-deoxyguanosine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H12N5O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H12N5O7P
    - annotation: !!omap
      - biggr: dgmp_c:-2
      - biocyc: META:DGMP
      - chebi:
        - CHEBI:57673
      - inchikey: LTFMZDNNPPEQNG-KVQBGUIXSA-L
      - kegg.compound: C00362
      - metanetx.chemical: MNXM546
      - reactome: R-ALL-500071
      - sbo: SBO:0000247
      - seed.compound: cpd00296
  - !!omap
    - id: dgsn_c
    - name: 2'-deoxyguanosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H13N5O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H13N5O4
    - annotation: !!omap
      - biggr: dgsn_c:0
      - biocyc: META:DEOXYGUANOSINE
      - chebi:
        - CHEBI:17172
      - hmdb: HMDB00085
      - inchikey: YKBGVTZYEHREMT-KVQBGUIXSA-N
      - kegg.compound: C00330
      - metanetx.chemical: MNXM647
      - sbo: SBO:0000247
      - seed.compound: cpd00277
  - !!omap
    - id: dgtp_c
    - name: dGTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H12N5O13P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H12N5O13P3
    - annotation: !!omap
      - biggr: dgtp_c:-4
      - biocyc: META:DGTP
      - chebi:
        - CHEBI:61429
      - hmdb: HMDB01440
      - inchikey: HAAZLUGHYHWQIW-KVQBGUIXSA-J
      - kegg.compound: C00286
      - metanetx.chemical: MNXM344
      - sbo: SBO:0000247
      - seed.compound: cpd00241
  - !!omap
    - id: dha_c
    - name: dihydroxyacetone
    - compartment: C_c
    - charge: 0.0
    - formula: C3H6O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H6O3
    - annotation: !!omap
      - biggr: dha_c:0
      - biocyc: META:DIHYDROXYACETONE
      - chebi:
        - CHEBI:16016
      - hmdb: HMDB01882
      - inchikey: RXKJFZQQPQGTFL-UHFFFAOYSA-N
      - kegg.compound: C00184
      - kegg.drug: D07841
      - metanetx.chemical: MNXM460
      - sbo: SBO:0000247
      - seed.compound: cpd00157
  - !!omap
    - id: dhap_c
    - name: glycerone phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C3H5O6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C3H5O6P
    - annotation: !!omap
      - biggr: dhap_c:-2
      - biocyc: META:DIHYDROXY-ACETONE-PHOSPHATE
      - chebi:
        - CHEBI:57642
      - hmdb:
        - HMDB01473
        - HMDB11735
      - inchikey: GNGACRATGGDKBX-UHFFFAOYSA-L
      - kegg.compound: C00111
      - metanetx.chemical: MNXM77
      - reactome:
        - R-ALL-188451
        - R-ALL-390404
        - R-ALL-75970
      - sbo: SBO:0000247
      - seed.compound: cpd00095
  - !!omap
    - id: dhf_c
    - name: dihydrofolate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C19H19N7O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C19H19N7O6
    - annotation: !!omap
      - biggr: dhf_c:-2
      - biocyc: META:DIHYDROFOLATE
      - chebi:
        - CHEBI:57451
      - hmdb: HMDB01056
      - inchikey: OZRNSSUDZOLUSN-LBPRGKRZSA-L
      - kegg.compound: C00415
      - metanetx.chemical: MNXM281
      - reactome: R-ALL-73604
      - sbo: SBO:0000247
      - seed.compound: cpd00330
  - !!omap
    - id: dhna_c
    - name: 1,4-dihydroxy-2-naphthoate
    - compartment: C_c
    - charge: -1.0
    - formula: C11H7O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C11H7O4
    - annotation: !!omap
      - biggr: dhna_c:-1
      - biocyc: META:DIHYDROXYNAPHTHOATE
      - chebi:
        - CHEBI:11173
      - inchikey: VOJUXHHACRXLTD-UHFFFAOYSA-M
      - kegg.compound: C03657
      - metanetx.chemical: MNXM552
      - sbo: SBO:0000247
      - seed.compound: cpd02295
  - !!omap
    - id: dhnpt_c
    - name: a 7,8-dihydroneopterin
    - compartment: C_c
    - charge: 0.0
    - formula: C9H13N5O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H13N5O4
    - annotation: !!omap
      - biggr: dhnpt_c:0
      - biocyc: META:DIHYDRO-NEO-PTERIN
      - chebi:
        - CHEBI:1001
        - CHEBI:11510
        - CHEBI:17001
        - CHEBI:19454
        - CHEBI:30567
        - CHEBI:44427
      - hmdb: HMDB02275
      - inchikey: YQIFAMYNGGOTFB-XINAWCOVSA-N
      - kegg.compound: C04874
      - metanetx.chemical: MNXM162359
      - sbo: SBO:0000247
      - seed.compound: cpd02961
  - !!omap
    - id: dhor__S_c
    - name: (S)-dihydroorotate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H5N2O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H5N2O4
    - annotation: !!omap
      - biggr: dhor__S_c:-1
      - biocyc: META:DI-H-OROTATE
      - chebi:
        - CHEBI:30864
      - hmdb: HMDB03349
      - inchikey: UFIVEPVSAGBUSI-REOHCLBHSA-M
      - kegg.compound: C00337
      - metanetx.chemical: MNXM252
      - reactome: R-ALL-76630
      - sbo: SBO:0000247
      - seed.compound: cpd00282
  - !!omap
    - id: __iPKB_Clostridiaceae__dhpmp_c
    - name: Dihydroneopterin monophosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C9H12N5O7P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C9H12N5O7P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dhpmp_c:0
      - biocyc: META:DIHYDRONEOPTERIN-P
      - chebi:
        - CHEBI:23756
        - CHEBI:4577
        - CHEBI:48954
        - CHEBI:58762
      - hmdb: HMDB06824
      - inchikey: PLSQMGZYOGSOCE-XINAWCOVSA-L
      - kegg.compound: C05925
      - metanetx.chemical: MNXM1645
      - sbo: SBO:0000247
      - seed.compound:
        - cpd03521
        - cpd29676
  - !!omap
    - id: dhpt_c
    - name: 7,8-dihydropteroate
    - compartment: C_c
    - charge: -1.0
    - formula: C14H13N6O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C14H13N6O3
    - annotation: !!omap
      - biggr: dhpt_c:-1
      - biocyc: META:7-8-DIHYDROPTEROATE
      - chebi:
        - CHEBI:17839
      - hmdb: HMDB01412
      - inchikey: WBFYVDCHGVNRBH-UHFFFAOYSA-M
      - kegg.compound: C00921
      - metanetx.chemical: MNXM722728
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00683
        - cpd28673
        - cpd28675
  - !!omap
    - id: dhptd_c
    - name: (S)-4,5-dihydroxypentane-2,3-dione
    - compartment: C_c
    - charge: 0.0
    - formula: C5H8O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H8O4
    - annotation: !!omap
      - biggr: dhptd_c:0
      - biocyc: META:DIHYDROXYPENTANEDIONE
      - chebi:
        - CHEBI:29484
      - inchikey: UYTRITJAZOPLCZ-BYPYZUCNSA-N
      - kegg.compound: C11838
      - metanetx.chemical: MNXM2449
      - sbo: SBO:0000247
      - seed.compound:
        - cpd08636
        - cpd08638
  - !!omap
    - id: diact_c
    - name: butane-2,3-dione
    - compartment: C_c
    - charge: 0.0
    - formula: C4H6O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H6O2
    - annotation: !!omap
      - biggr: diact_c:0
      - biocyc: META:DIACETYL
      - chebi:
        - CHEBI:16583
      - hmdb: HMDB03407
      - inchikey: QSJXEFYPDANLFS-UHFFFAOYSA-N
      - kegg.compound: C00741
      - lipidmaps: LMFA12000012
      - metanetx.chemical: MNXM1467
      - sbo: SBO:0000247
      - seed.compound: cpd00551
  - !!omap
    - id: didp_c
    - name: 2'-deoxyinosine 5'-diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H11N4O10P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H11N4O10P2
    - annotation: !!omap
      - biggr: didp_c:-3
      - biocyc: META:CPD0-2231
      - chebi:
        - CHEBI:62286
      - hmdb: HMDB03536
      - inchikey: BKUSIKGSPSFQAC-RRKCRQDMSA-K
      - kegg.compound: C01344
      - metanetx.chemical: MNXM2174
      - reactome: R-ALL-2509796
      - sbo: SBO:0000247
      - seed.compound: cpd00976
  - !!omap
    - id: dimp_c
    - name: 2'-deoxyinosine 5'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H11N4O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H11N4O7P
    - annotation: !!omap
      - biggr: dimp_c:-2
      - biocyc: META:DIMP
      - chebi:
        - CHEBI:61194
      - hmdb: HMDB06555
      - inchikey: PHNGFPPXDJJADG-RRKCRQDMSA-L
      - kegg.compound: C06196
      - metanetx.chemical: MNXM1922
      - reactome:
        - R-ALL-109330
        - R-ALL-2509805
      - sbo: SBO:0000247
      - seed.compound: cpd03704
  - !!omap
    - id: din_c
    - name: 2'-deoxyinosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H12N4O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H12N4O4
    - annotation: !!omap
      - biggr: din_c:0
      - biocyc: META:DEOXYINOSINE
      - chebi:
        - CHEBI:28997
      - hmdb: HMDB00071
      - inchikey: VGONTNSXDCQUGY-RRKCRQDMSA-N
      - kegg.compound: C05512
      - metanetx.chemical: MNXM935
      - sbo: SBO:0000247
      - seed.compound: cpd03279
  - !!omap
    - id: ditp_c
    - name: dITP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H11N4O13P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H11N4O13P3
    - annotation: !!omap
      - biggr: ditp_c:-4
      - biocyc: META:DITP
      - chebi:
        - CHEBI:61382
      - inchikey: UFJPAQSLHAGEBL-RRKCRQDMSA-J
      - kegg.compound: C01345
      - metanetx.chemical: MNXM1325
      - reactome: R-ALL-2509835
      - sbo: SBO:0000247
      - seed.compound: cpd00977
  - !!omap
    - id: __iPKB_Clostridiaceae__dmlz_c
    - name: 6,7-Dimethyl-8-(1-D-ribityl)lumazine
    - compartment: C_c
    - charge: 0.0
    - formula: C13H19N4O6
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C13H19N4O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dmlz_c:0
      - biocyc: META:DIMETHYL-D-RIBITYL-LUMAZINE
      - chebi:
        - CHEBI:12185
        - CHEBI:17601
        - CHEBI:20682
        - CHEBI:2154
        - CHEBI:58201
      - hmdb: HMDB03826
      - inchikey: SXDXRJZUAJBNFL-XKSSXDPKSA-M
      - kegg.compound: C04332
      - metanetx.chemical: MNXM1313
      - sbo: SBO:0000247
      - seed.compound: cpd02656
  - !!omap
    - id: dmpp_c
    - name: prenyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C5H9O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C5H9O7P2
    - annotation: !!omap
      - biggr: dmpp_c:-3
      - biocyc: META:CPD-4211
      - chebi:
        - CHEBI:57623
      - hmdb:
        - HMDB01120
        - HMDB02101
      - inchikey: CBIDRCWHNCKSTO-UHFFFAOYSA-K
      - kegg.compound: C00235
      - lipidmaps: LMPR01010001
      - metanetx.chemical: MNXM132
      - reactome:
        - R-ALL-1132235
        - R-ALL-191324
        - R-ALL-6787596
      - sbo: SBO:0000247
      - seed.compound: cpd00202
  - !!omap
    - id: dnad_c
    - name: deamido-NAD(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C21H24N6O15P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C21H24N6O15P2
    - annotation: !!omap
      - biggr: dnad_c:-2
      - biocyc: META:DEAMIDO-NAD
      - chebi:
        - CHEBI:58437
      - hmdb: HMDB01179
      - inchikey: SENPVEZBRZQVST-HISDBWNOSA-L
      - kegg.compound: C00857
      - metanetx.chemical: MNXM309
      - reactome:
        - R-ALL-197256
        - R-ALL-200499
        - R-ALL-8938090
      - sbo: SBO:0000247
      - seed.compound: cpd00638
  - !!omap
    - id: dpcoa_c
    - name: 3'-dephospho-CoA(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C21H33N7O13P2S
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C21H33N7O13P2S
    - annotation: !!omap
      - biggr: dpcoa_c:-2
      - biocyc: META:DEPHOSPHO-COA
      - chebi:
        - CHEBI:57328
      - hmdb: HMDB01373
      - inchikey: KDTSHFARGAKYJN-IBOSZNHHSA-L
      - kegg.compound: C00882
      - lipidmaps: LMFA07050315
      - metanetx.chemical: MNXM481
      - reactome: R-ALL-196778
      - sbo: SBO:0000247
      - seed.compound: cpd00655
  - !!omap
    - id: drib_c
    - name: 2-deoxy-D-ribofuranose
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O4
    - annotation: !!omap
      - biggr: drib_c:0
      - chebi:
        - CHEBI:90761
      - hmdb: HMDB03224
      - inchikey: PDWIQYODPROSQH-PYHARJCCSA-N
      - kegg.compound: C01801
      - metanetx.chemical: MNXM90412
      - sbo: SBO:0000247
      - seed.compound: cpd01242
  - !!omap
    - id: drib_e
    - name: 2-deoxy-D-ribofuranose
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O4
    - annotation: !!omap
      - biggr: drib_e:0
      - chebi:
        - CHEBI:90761
      - hmdb: HMDB03224
      - inchikey: PDWIQYODPROSQH-PYHARJCCSA-N
      - kegg.compound: C01801
      - metanetx.chemical: MNXM90412
      - sbo: SBO:0000247
      - seed.compound: cpd01242
  - !!omap
    - id: __iPKB_Clostridiaceae__dscl_c
    - name: Dihydrosirohydrochlorin
    - compartment: C_c
    - charge: 0.0
    - formula: C42H41N4O16
    - notes: !!omap
      - CHARGE: '-7.0'
      - FORMULA: C42H41N4O16
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__dscl_c:0
      - biocyc: META:DIHYDROSIROHYDROCHLORIN
      - chebi:
        - CHEBI:14870
        - CHEBI:50602
        - CHEBI:58827
        - CHEBI:8370
      - inchikey: OQIIYZQTTMKFAU-ZNLOQLQNSA-G
      - kegg.compound: C02463
      - metanetx.chemical: MNXM672
      - sbo: SBO:0000247
      - seed.compound: cpd01620
  - !!omap
    - id: dtdp_c
    - name: dTDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H13N2O11P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H13N2O11P2
    - annotation: !!omap
      - biggr: dtdp_c:-3
      - biocyc: META:TDP
      - chebi:
        - CHEBI:58369
      - hmdb: HMDB01274
      - inchikey: UJLXYODCHAELLY-XLPZGREQSA-K
      - kegg.compound: C00363
      - metanetx.chemical: MNXM152
      - sbo: SBO:0000247
      - seed.compound: cpd00297
  - !!omap
    - id: dtmp_c
    - name: dTMP(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H13N2O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H13N2O8P
    - annotation: !!omap
      - biggr: dtmp_c:-2
      - biocyc: META:TMP
      - chebi:
        - CHEBI:63528
      - hmdb: HMDB01227
      - inchikey: GYOZYWVXFNDGLU-XLPZGREQSA-L
      - kegg.compound: C00364
      - metanetx.chemical: MNXM257
      - reactome: R-ALL-109366
      - sbo: SBO:0000247
      - seed.compound: cpd00298
  - !!omap
    - id: dttp_c
    - name: dTTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H13N2O14P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H13N2O14P3
    - annotation: !!omap
      - biggr: dttp_c:-4
      - biocyc: META:TTP
      - chebi:
        - CHEBI:37568
      - hmdb: HMDB01342
      - inchikey: NHVNXKFIZYSCEB-XLPZGREQSA-J
      - kegg.compound: C00459
      - metanetx.chemical: MNXM394
      - sbo: SBO:0000247
      - seed.compound: cpd00357
  - !!omap
    - id: dudp_c
    - name: dUDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C9H11N2O11P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C9H11N2O11P2
    - annotation: !!omap
      - biggr: dudp_c:-3
      - biocyc: META:DUDP
      - chebi:
        - CHEBI:60471
      - hmdb: HMDB01000
      - inchikey: QHWZTVCCBMIIKE-SHYZEUOFSA-K
      - kegg.compound: C01346
      - metanetx.chemical: MNXM572
      - sbo: SBO:0000247
      - seed.compound: cpd00978
  - !!omap
    - id: dump_c
    - name: dUMP(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H11N2O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H11N2O8P
    - annotation: !!omap
      - biggr: dump_c:-2
      - biocyc: META:DUMP
      - chebi:
        - CHEBI:246422
      - hmdb: HMDB01409
      - inchikey: JSRLJPSBLDHEIO-SHYZEUOFSA-L
      - kegg.compound: C00365
      - metanetx.chemical: MNXM234
      - reactome:
        - R-ALL-109382
        - R-ALL-500742
      - sbo: SBO:0000247
      - seed.compound: cpd00299
  - !!omap
    - id: duri_c
    - name: 2'-deoxyuridine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H12N2O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H12N2O5
    - annotation: !!omap
      - biggr: duri_c:0
      - biocyc: META:DEOXYURIDINE
      - chebi:
        - CHEBI:16450
      - hmdb: HMDB00012
      - inchikey: MXHRCPNRJAMMIM-SHYZEUOFSA-N
      - kegg.compound: C00526
      - metanetx.chemical: MNXM492
      - reactome: R-ALL-500430
      - sbo: SBO:0000247
      - seed.compound: cpd00412
  - !!omap
    - id: dutp_c
    - name: dUTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C9H11N2O14P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C9H11N2O14P3
    - annotation: !!omap
      - biggr: dutp_c:-4
      - biocyc: META:DUTP
      - chebi:
        - CHEBI:61555
      - hmdb: HMDB01191
      - inchikey: AHCYMLUZIRLXAA-SHYZEUOFSA-J
      - kegg.compound: C00460
      - metanetx.chemical: MNXM452
      - reactome: R-ALL-500739
      - sbo: SBO:0000247
      - seed.compound: cpd00358
  - !!omap
    - id: dxyl5p_c
    - name: 1-deoxy-D-xylulose 5-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O7P
    - annotation: !!omap
      - biggr: dxyl5p_c:-2
      - biocyc: META:DEOXYXYLULOSE-5P
      - chebi:
        - CHEBI:57792
      - hmdb: HMDB01213
      - inchikey: AJPADPZSRRUGHI-RFZPGFLSSA-L
      - kegg.compound: C11437
      - metanetx.chemical: MNXM622
      - sbo: SBO:0000247
      - seed.compound: cpd08289
  - !!omap
    - id: e4p_c
    - name: D-erythrose 4-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H7O7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H7O7P
    - annotation: !!omap
      - biggr: e4p_c:-2
      - biocyc: META:ERYTHROSE-4P
      - chebi:
        - CHEBI:16897
      - hmdb: HMDB01321
      - inchikey: NGHMDNPXVRFFGS-IUYQGCFVSA-L
      - kegg.compound: C00279
      - metanetx.chemical: MNXM258
      - reactome: R-ALL-29878
      - sbo: SBO:0000247
      - seed.compound: cpd00236
  - !!omap
    - id: eig3p_c
    - name: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H9N2O6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H9N2O6P
    - annotation: !!omap
      - biggr: eig3p_c:-2
      - biocyc: META:D-ERYTHRO-IMIDAZOLE-GLYCEROL-P
      - chebi:
        - CHEBI:58278
      - hmdb: HMDB12208
      - inchikey: HFYBTHCYPKEDQQ-RITPCOANSA-L
      - kegg.compound: C04666
      - metanetx.chemical: MNXM1422
      - sbo: SBO:0000247
      - seed.compound: cpd02843
  - !!omap
    - id: etoh_c
    - name: ethanol
    - compartment: C_c
    - charge: 0.0
    - formula: C2H6O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H6O
    - annotation: !!omap
      - biggr: etoh_c:0
      - biocyc: META:ETOH
      - chebi:
        - CHEBI:16236
      - hmdb: HMDB00108
      - inchikey: LFQSCWFLJHTTHZ-UHFFFAOYSA-N
      - kegg.compound: C00469
      - kegg.drug:
        - D00068
        - D02798
        - D04855
        - D06542
      - metanetx.chemical: MNXM303
      - reactome:
        - R-ALL-113748
        - R-ALL-30203
      - sbo: SBO:0000247
      - seed.compound: cpd00363
  - !!omap
    - id: f1p_c
    - name: beta-D-fructofuranose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: f1p_c:-2
      - biocyc: META:D-fructofuranose-1-phosphate
      - chebi:
        - CHEBI:138881
      - inchikey: RHKKZBWRNHGJEZ-VRPWFDPXSA-L
      - kegg.compound: C01094
      - metanetx.chemical: MNXM145568
      - sbo: SBO:0000247
      - seed.compound: cpd00802
  - !!omap
    - id: f6p_c
    - name: beta-D-fructofuranose 6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: f6p_c:-2
      - biocyc: META:FRUCTOSE-6P
      - chebi:
        - CHEBI:57634
      - hmdb: HMDB03971
      - inchikey: BGWGXPAPYGQALX-ARQDHWQXSA-L
      - kegg.compound: C05345
      - metanetx.chemical: MNXM89621
      - sbo: SBO:0000247
      - seed.compound: cpd19035
  - !!omap
    - id: fad_c
    - name: FAD
    - compartment: C_c
    - charge: 0.0
    - formula: C27H33N9O15P2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C27H33N9O15P2
    - annotation: !!omap
      - biggr: fad_c:0
      - biocyc: META:FAD
      - chebi:
        - CHEBI:16238
      - hmdb: HMDB01248
      - inchikey: IMGVNJNCCGXBHD-UYBVJOGSSA-K
      - kegg.compound: C00016
      - kegg.drug: D00005
      - metanetx.chemical: MNXM33
      - reactome:
        - R-ALL-113596
        - R-ALL-113597
        - R-ALL-29386
      - sbo: SBO:0000247
      - seed.compound: cpd00015
  - !!omap
    - id: fad_e
    - name: FAD
    - compartment: C_e
    - charge: 0.0
    - formula: C27H33N9O15P2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C27H33N9O15P2
    - annotation: !!omap
      - biggr: fad_e:0
      - biocyc: META:FAD
      - chebi:
        - CHEBI:16238
      - hmdb: HMDB01248
      - inchikey: IMGVNJNCCGXBHD-UYBVJOGSSA-K
      - kegg.compound: C00016
      - kegg.drug: D00005
      - metanetx.chemical: MNXM33
      - reactome:
        - R-ALL-113596
        - R-ALL-113597
        - R-ALL-29386
      - sbo: SBO:0000247
      - seed.compound: cpd00015
  - !!omap
    - id: fad_p
    - name: FAD
    - compartment: C_p
    - charge: 0.0
    - formula: C27H33N9O15P2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C27H33N9O15P2
    - annotation: !!omap
      - biggr: fad_p:0
      - biocyc: META:FAD
      - chebi:
        - CHEBI:16238
      - hmdb: HMDB01248
      - inchikey: IMGVNJNCCGXBHD-UYBVJOGSSA-K
      - kegg.compound: C00016
      - kegg.drug: D00005
      - metanetx.chemical: MNXM33
      - reactome:
        - R-ALL-113596
        - R-ALL-113597
        - R-ALL-29386
      - sbo: SBO:0000247
      - seed.compound: cpd00015
  - !!omap
    - id: fadh2_c
    - name: FADH2
    - compartment: C_c
    - charge: 0.0
    - formula: C27H35N9O15P2
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: C27H35N9O15P2
    - annotation: !!omap
      - biggr: fadh2_c:0
      - biocyc: META:FADH2
      - chebi:
        - CHEBI:17877
      - hmdb:
        - HMDB01197
        - HMDB06252
        - HMDB06358
      - inchikey: YPZRHBJKEMOYQH-UYBVJOGSSA-L
      - kegg.compound: C01352
      - metanetx.chemical: MNXM38
      - reactome:
        - R-ALL-164934
        - R-ALL-31649
      - sbo: SBO:0000247
      - seed.compound: cpd00982
  - !!omap
    - id: fald_c
    - name: formaldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: CH2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH2O
    - annotation: !!omap
      - biggr: fald_c:0
      - biocyc:
        - META:CARBONYL-GROUP
        - META:FORMALDEHYDE
      - chebi:
        - CHEBI:16842
      - hmdb: HMDB01426
      - inchikey: WSFSSNUMVMOOMR-UHFFFAOYSA-N
      - kegg.compound: C00067
      - kegg.drug: D00017
      - metanetx.chemical: MNXM56
      - reactome:
        - R-ALL-143501
        - R-ALL-29478
        - R-ALL-6797920
        - R-ALL-879250
      - sbo: SBO:0000247
      - seed.compound: cpd00055
  - !!omap
    - id: fald_p
    - name: formaldehyde
    - compartment: C_p
    - charge: 0.0
    - formula: CH2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH2O
    - annotation: !!omap
      - biggr: fald_p:0
      - biocyc:
        - META:CARBONYL-GROUP
        - META:FORMALDEHYDE
      - chebi:
        - CHEBI:16842
      - hmdb: HMDB01426
      - inchikey: WSFSSNUMVMOOMR-UHFFFAOYSA-N
      - kegg.compound: C00067
      - kegg.drug: D00017
      - metanetx.chemical: MNXM56
      - reactome:
        - R-ALL-143501
        - R-ALL-29478
        - R-ALL-6797920
        - R-ALL-879250
      - sbo: SBO:0000247
      - seed.compound: cpd00055
  - !!omap
    - id: __iPKB_Clostridiaceae__fc1p_c
    - name: L-Fuculose 1-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O8P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C6H11O8P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fc1p_c:0
      - biocyc: META:FUCULOSE-1P
      - chebi:
        - CHEBI:13104
        - CHEBI:13105
        - CHEBI:16647
        - CHEBI:21296
        - CHEBI:57846
        - CHEBI:6220
      - inchikey: KNYGWWDTPGSEPD-LFRDXLMFSA-L
      - kegg.compound: C01099
      - metanetx.chemical: MNXM1749
      - sbo: SBO:0000247
      - seed.compound: cpd00806
  - !!omap
    - id: __iPKB_Clostridiaceae__fcmcbtt_c
    - name: Iron(III) chelated carboxymycobactin T (R=8 carbon, final carbon is 
        carboxyl group)
    - compartment: C_c
    - charge: 0.0
    - formula: C33FeH49N5O13
    - notes: !!omap
      - FORMULA: C33FeH49N5O13
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fcmcbtt_c:0
      - metanetx.chemical: MNXM11903
      - sbo: SBO:0000247
      - seed.compound: cpd15952
  - !!omap
    - id: __iPKB_Clostridiaceae__fdp_c
    - name: D-Fructose 1,6-bisphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H10O12P2
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C6H10O12P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fdp_c:0
      - chebi:
        - CHEBI:37736
        - CHEBI:49299
      - inchikey: RNBGYGVWRKECFJ-VRPWFDPXSA-J
      - kegg.compound: C00354
      - metanetx.chemical: MNXM417
      - sbo: SBO:0000247
      - seed.compound: cpd00290
  - !!omap
    - id: fdxox_c
    - name: oxidized [2Fe-2S]-[ferredoxin]
    - compartment: C_c
    - charge: 2.0
    - formula: Fe2S2
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Fe2S2
    - annotation: !!omap
      - biggr: fdxox_c:2
      - biocyc: META:Oxidized-ferredoxins
      - chebi:
        - CHEBI:14717
        - CHEBI:17908
        - CHEBI:7836
      - kegg.compound: C00139
      - metanetx.chemical: MNXM178
      - sbo: SBO:0000252
      - seed.compound: cpd11621
  - !!omap
    - id: fdxrd_c
    - name: reduced [2Fe-2S]-[ferredoxin]
    - compartment: C_c
    - charge: 1.0
    - formula: Fe2S2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: Fe2S2
    - annotation: !!omap
      - biggr: fdxrd_c:1
      - biocyc: META:Reduced-ferredoxins
      - chebi:
        - CHEBI:15024
        - CHEBI:17513
        - CHEBI:8792
      - kegg.compound: C00138
      - metanetx.chemical: MNXM169
      - sbo: SBO:0000252
      - seed.compound: cpd11620
  - !!omap
    - id: fe2_c
    - name: iron(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Fe
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Fe
    - annotation: !!omap
      - biggr: fe2_c:2
      - biocyc: META:FE+2
      - chebi:
        - CHEBI:29033
      - hmdb: HMDB00692
      - inchikey: CWYNVVGOOAEACU-UHFFFAOYSA-N
      - kegg.compound: C14818
      - metanetx.chemical: MNXM111
      - sbo: SBO:0000247
      - seed.compound: cpd10515
  - !!omap
    - id: fe2_e
    - name: iron(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Fe
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Fe
    - annotation: !!omap
      - biggr: fe2_e:2
      - biocyc: META:FE+2
      - chebi:
        - CHEBI:29033
      - hmdb: HMDB00692
      - inchikey: CWYNVVGOOAEACU-UHFFFAOYSA-N
      - kegg.compound: C14818
      - metanetx.chemical: MNXM111
      - sbo: SBO:0000247
      - seed.compound: cpd10515
  - !!omap
    - id: fe2_p
    - name: iron(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Fe
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Fe
    - annotation: !!omap
      - biggr: fe2_p:2
      - biocyc: META:FE+2
      - chebi:
        - CHEBI:29033
      - hmdb: HMDB00692
      - inchikey: CWYNVVGOOAEACU-UHFFFAOYSA-N
      - kegg.compound: C14818
      - metanetx.chemical: MNXM111
      - sbo: SBO:0000247
      - seed.compound: cpd10515
  - !!omap
    - id: fe3_c
    - name: iron(3+)
    - compartment: C_c
    - charge: 3.0
    - formula: Fe
    - notes: !!omap
      - CHARGE: '3'
      - FORMULA: Fe
    - annotation: !!omap
      - biggr: fe3_c:3
      - biocyc: META:FE+3
      - chebi:
        - CHEBI:29034
      - hmdb: HMDB12943
      - inchikey: VTLYFUHAOXGGBS-UHFFFAOYSA-N
      - kegg.compound: C14819
      - metanetx.chemical: MNXM196
      - reactome:
        - R-ALL-111736
        - R-ALL-912516
        - R-ALL-912519
        - R-ALL-917943
        - R-ALL-917966
      - sbo: SBO:0000247
      - seed.compound: cpd10516
  - !!omap
    - id: fe3_e
    - name: iron(3+)
    - compartment: C_e
    - charge: 3.0
    - formula: Fe
    - notes: !!omap
      - CHARGE: '3'
      - FORMULA: Fe
    - annotation: !!omap
      - biggr: fe3_e:3
      - biocyc: META:FE+3
      - chebi:
        - CHEBI:29034
      - hmdb: HMDB12943
      - inchikey: VTLYFUHAOXGGBS-UHFFFAOYSA-N
      - kegg.compound: C14819
      - metanetx.chemical: MNXM196
      - reactome:
        - R-ALL-111736
        - R-ALL-912516
        - R-ALL-912519
        - R-ALL-917943
        - R-ALL-917966
      - sbo: SBO:0000247
      - seed.compound: cpd10516
  - !!omap
    - id: fe3_p
    - name: iron(3+)
    - compartment: C_p
    - charge: 3.0
    - formula: Fe
    - notes: !!omap
      - CHARGE: '3'
      - FORMULA: Fe
    - annotation: !!omap
      - biggr: fe3_p:3
      - biocyc: META:FE+3
      - chebi:
        - CHEBI:29034
      - hmdb: HMDB12943
      - inchikey: VTLYFUHAOXGGBS-UHFFFAOYSA-N
      - kegg.compound: C14819
      - metanetx.chemical: MNXM196
      - reactome:
        - R-ALL-111736
        - R-ALL-912516
        - R-ALL-912519
        - R-ALL-917943
        - R-ALL-917966
      - sbo: SBO:0000247
      - seed.compound: cpd10516
  - !!omap
    - id: __iPKB_Clostridiaceae__fe3mcbtt_e
    - name: Iron III  chelated mycobactin T
    - compartment: C_e
    - charge: 0.0
    - formula: C47FeH77N5O10
    - notes: !!omap
      - FORMULA: C47FeH77N5O10
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fe3mcbtt_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__fe3pyovd_kt_e
    - name: Ferrypyoverdine  P putida KT2440 specific
    - compartment: C_e
    - charge: 0.0
    - formula: C27FeH48N10O15
    - notes: !!omap
      - FORMULA: C27FeH48N10O15
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fe3pyovd_kt_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__fgam_c
    - name: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide
    - compartment: C_c
    - charge: 0.0
    - formula: C8H13N2O9P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C8H13N2O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fgam_c:0
      - biocyc: META:5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE
      - chebi:
        - CHEBI:12635
        - CHEBI:18272
        - CHEBI:1982
        - CHEBI:20498
        - CHEBI:42411
        - CHEBI:58426
      - hmdb:
        - HMDB01308
        - HMDB06476
      - inchikey: VDXLUNDMVKSKHO-ZRTZXPPTSA-L
      - kegg.compound: C04376
      - metanetx.chemical: MNXM453
      - reactome: R-ALL-111354
      - sbo: SBO:0000247
      - seed.compound: cpd02678
  - !!omap
    - id: __iPKB_Clostridiaceae__fmnRD_c
    - name: Flavin mononucleotide reduced C17H21N4O9P
    - compartment: C_c
    - charge: 0.0
    - formula: C17H23N4O9P
    - notes: !!omap
      - FORMULA: C17H23N4O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fmnRD_c:0
      - metanetx.chemical: MNXM162674
      - sbo: SBO:0000247
      - seed.compound: cpd29733
  - !!omap
    - id: fmn_c
    - name: FMN
    - compartment: C_c
    - charge: 0.0
    - formula: C17H21N4O9P
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C17H21N4O9P
    - annotation: !!omap
      - biggr: fmn_c:0
      - biocyc: META:FMN
      - chebi:
        - CHEBI:17621
      - hmdb: HMDB01520
      - inchikey: ANKZYBDXHMZBDK-SCRDCRAPSA-K
      - kegg.compound: C00061
      - metanetx.chemical: MNXM119
      - reactome: R-ALL-73524
      - sbo: SBO:0000247
      - seed.compound: cpd00050
  - !!omap
    - id: fmn_e
    - name: FMN
    - compartment: C_e
    - charge: 0.0
    - formula: C17H21N4O9P
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C17H21N4O9P
    - annotation: !!omap
      - biggr: fmn_e:0
      - biocyc: META:FMN
      - chebi:
        - CHEBI:17621
      - hmdb: HMDB01520
      - inchikey: ANKZYBDXHMZBDK-SCRDCRAPSA-K
      - kegg.compound: C00061
      - metanetx.chemical: MNXM119
      - reactome: R-ALL-73524
      - sbo: SBO:0000247
      - seed.compound: cpd00050
  - !!omap
    - id: fmn_p
    - name: FMN
    - compartment: C_p
    - charge: 0.0
    - formula: C17H21N4O9P
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C17H21N4O9P
    - annotation: !!omap
      - biggr: fmn_p:0
      - biocyc: META:FMN
      - chebi:
        - CHEBI:17621
      - hmdb: HMDB01520
      - inchikey: ANKZYBDXHMZBDK-SCRDCRAPSA-K
      - kegg.compound: C00061
      - metanetx.chemical: MNXM119
      - reactome: R-ALL-73524
      - sbo: SBO:0000247
      - seed.compound: cpd00050
  - !!omap
    - id: fmnh2_c
    - name: FMNH2
    - compartment: C_c
    - charge: 0.0
    - formula: C17H23N4O9P
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: C17H23N4O9P
    - annotation: !!omap
      - biggr: fmnh2_c:0
      - biocyc: META:FMNH2
      - chebi:
        - CHEBI:16048
      - hmdb: HMDB01142
      - inchikey: YTNIXZGTHTVJBW-SCRDCRAPSA-L
      - kegg.compound: C01847
      - metanetx.chemical: MNXM208
      - sbo: SBO:0000247
      - seed.compound: cpd01270
  - !!omap
    - id: fol_c
    - name: folate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C19H17N7O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C19H17N7O6
    - annotation: !!omap
      - biggr: fol_c:-2
      - biocyc: META:CPD-12826
      - chebi:
        - CHEBI:62501
      - hmdb: HMDB00121
      - inchikey: OVBPIULPVIDEAO-LBPRGKRZSA-L
      - kegg.compound: C00504
      - kegg.drug: D00070
      - metanetx.chemical: MNXM617
      - reactome:
        - R-ALL-197965
        - R-ALL-200716
      - sbo: SBO:0000247
      - seed.compound: cpd00393
  - !!omap
    - id: fol_e
    - name: folate(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: C19H17N7O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C19H17N7O6
    - annotation: !!omap
      - biggr: fol_e:-2
      - biocyc: META:CPD-12826
      - chebi:
        - CHEBI:62501
      - hmdb: HMDB00121
      - inchikey: OVBPIULPVIDEAO-LBPRGKRZSA-L
      - kegg.compound: C00504
      - kegg.drug: D00070
      - metanetx.chemical: MNXM617
      - reactome:
        - R-ALL-197965
        - R-ALL-200716
      - sbo: SBO:0000247
      - seed.compound: cpd00393
  - !!omap
    - id: for_c
    - name: formate
    - compartment: C_c
    - charge: -1.0
    - formula: CHO2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: CHO2
    - annotation: !!omap
      - biggr: for_c:-1
      - biocyc:
        - META:CARBOXYL-GROUP
        - META:CPD-9845
        - META:CPD1G-1532
        - META:CPD1G-1533
        - META:CPD1G-1534
        - META:CPD1G-1535
        - META:FORMATE
      - chebi:
        - CHEBI:15740
      - hmdb: HMDB00142
      - inchikey: BDAGIHXWWSANSR-UHFFFAOYSA-M
      - kegg.compound: C00058
      - metanetx.chemical: MNXM39
      - reactome:
        - R-ALL-194712
        - R-ALL-29460
        - R-ALL-389585
        - R-ALL-6801451
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00047
        - cpd22511
  - !!omap
    - id: __iPKB_Clostridiaceae__fpram_c
    - name: 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine
    - compartment: C_c
    - charge: 0.0
    - formula: C8H14N3O8P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C8H14N3O8P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fpram_c:0
      - chebi:
        - CHEBI:11474
        - CHEBI:18413
        - CHEBI:58478
        - CHEBI:971
      - hmdb: HMDB06211
      - inchikey: PMCOGCVKOAOZQM-ZRTZXPPTSA-M
      - metanetx.chemical: MNXM479745
      - reactome: R-ALL-111369
      - sbo: SBO:0000247
  - !!omap
    - id: fprica_c
    - name: 5-formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H13N4O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H13N4O9P
    - annotation: !!omap
      - biggr: fprica_c:-2
      - biocyc: META:PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE
      - chebi:
        - CHEBI:58467
      - hmdb:
        - HMDB01439
        - HMDB62708
      - inchikey: ABCOOORLYAOBOZ-KQYNXXCUSA-L
      - kegg.compound: C04734
      - metanetx.chemical: MNXM456
      - reactome: R-ALL-111427
      - sbo: SBO:0000247
      - seed.compound: cpd02884
  - !!omap
    - id: frdp_c
    - name: 2-trans,6-trans-farnesyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C15H25O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C15H25O7P2
    - annotation: !!omap
      - biggr: frdp_c:-3
      - biocyc: META:FARNESYL-PP
      - chebi:
        - CHEBI:175763
      - hmdb:
        - HMDB00961
        - HMDB04201
      - inchikey: VWFJDQUYCIWHTN-YFVJMOTDSA-K
      - kegg.compound: C00448
      - lipidmaps: LMPR0103010002
      - metanetx.chemical: MNXM34
      - reactome:
        - R-ALL-191385
        - R-ALL-2162257
        - R-ALL-4419987
      - sbo: SBO:0000247
      - seed.compound: cpd00350
  - !!omap
    - id: __iPKB_Clostridiaceae__fru_B_c
    - name: Beta-D-fructose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__fru_B_c:0
      - biocyc: META:BETA-D-FRUCTOSE
      - chebi:
        - CHEBI:10373
        - CHEBI:22766
        - CHEBI:28645
        - CHEBI:42560
      - hmdb: HMDB00660
      - inchikey: RFSUNEUAIZKAJO-ARQDHWQXSA-N
      - kegg.compound: C02336
      - metanetx.chemical: MNXM1542
      - sbo: SBO:0000247
      - seed.compound: cpd30321
  - !!omap
    - id: fru_c
    - name: beta-D-fructofuranose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: fru_c:0
      - biocyc:
        - META:CPD-15382
        - META:D-Fructopyranose
        - META:FRU
        - META:Fructofuranose
      - chebi:
        - CHEBI:28645
      - hmdb: HMDB62538
      - inchikey: RFSUNEUAIZKAJO-VRPWFDPXSA-N
      - kegg.compound:
        - C00095
        - C01496
        - C05003
        - C10906
      - kegg.drug: D00114
      - metanetx.chemical: MNXM175
      - reactome:
        - R-ALL-189049
        - R-ALL-29532
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00082
        - cpd19015
        - cpd27040
  - !!omap
    - id: fru_e
    - name: beta-D-fructofuranose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: fru_e:0
      - biocyc:
        - META:CPD-15382
        - META:D-Fructopyranose
        - META:FRU
        - META:Fructofuranose
      - chebi:
        - CHEBI:28645
      - hmdb: HMDB62538
      - inchikey: RFSUNEUAIZKAJO-VRPWFDPXSA-N
      - kegg.compound:
        - C00095
        - C01496
        - C05003
        - C10906
      - kegg.drug: D00114
      - metanetx.chemical: MNXM175
      - reactome:
        - R-ALL-189049
        - R-ALL-29532
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00082
        - cpd19015
        - cpd27040
  - !!omap
    - id: fru_p
    - name: beta-D-fructofuranose
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: fru_p:0
      - biocyc:
        - META:CPD-15382
        - META:D-Fructopyranose
        - META:FRU
        - META:Fructofuranose
      - chebi:
        - CHEBI:28645
      - hmdb: HMDB62538
      - inchikey: RFSUNEUAIZKAJO-VRPWFDPXSA-N
      - kegg.compound:
        - C00095
        - C01496
        - C05003
        - C10906
      - kegg.drug: D00114
      - metanetx.chemical: MNXM175
      - reactome:
        - R-ALL-189049
        - R-ALL-29532
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00082
        - cpd19015
        - cpd27040
  - !!omap
    - id: fcl__L_e
    - name: L-fuculose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O5
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C6H12O5
    - annotation: !!omap
      - biggr: fcl__L_e:0
      - chebi:
        - CHEBI:17617
      - sbo: SBO:0000247
  - !!omap
    - id: fum_c
    - name: fumarate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H2O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H2O4
    - annotation: !!omap
      - biggr: fum_c:-2
      - biocyc: META:FUM
      - chebi:
        - CHEBI:29806
      - hmdb: HMDB00134
      - inchikey: VZCYOOQTPOCHFL-OWOJBTEDSA-L
      - kegg.compound: C00122
      - kegg.drug: D02308
      - metanetx.chemical: MNXM93
      - reactome:
        - R-ALL-113588
        - R-ALL-29586
      - sbo: SBO:0000247
      - seed.compound: cpd00106
  - !!omap
    - id: fum_p
    - name: fumarate(2-)
    - compartment: C_p
    - charge: -2.0
    - formula: C4H2O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H2O4
    - annotation: !!omap
      - biggr: fum_p:-2
      - biocyc: META:FUM
      - chebi:
        - CHEBI:29806
      - hmdb: HMDB00134
      - inchikey: VZCYOOQTPOCHFL-OWOJBTEDSA-L
      - kegg.compound: C00122
      - kegg.drug: D02308
      - metanetx.chemical: MNXM93
      - reactome:
        - R-ALL-113588
        - R-ALL-29586
      - sbo: SBO:0000247
      - seed.compound: cpd00106
  - !!omap
    - id: g1p_B_c
    - name: beta-D-glucose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: g1p_B_c:-2
      - biocyc: META:CPD-448
      - chebi:
        - CHEBI:57684
      - inchikey: HXXFSFRBOHSIMQ-DVKNGEFBSA-L
      - kegg.compound: C00663
      - metanetx.chemical: MNXM679
      - sbo: SBO:0000247
      - seed.compound: cpd00501
  - !!omap
    - id: g1p_c
    - name: D-glucopyranose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: g1p_c:-2
      - biocyc:
        - META:D-glucose-1-phosphates
        - META:GLC-1-P
      - chebi:
        - CHEBI:57629
      - hmdb:
        - HMDB01306
        - HMDB01586
      - inchikey: HXXFSFRBOHSIMQ-GASJEMHNSA-L
      - kegg.compound: C00103
      - metanetx.chemical: MNXM89588
      - reactome: R-ALL-29548
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00089
        - cpd28817
  - !!omap
    - id: __iPKB_Clostridiaceae__g3p_c
    - name: Glyceraldehyde 3-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C3H5O6P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C3H5O6P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__g3p_c:0
      - biocyc: META:GAP
      - chebi:
        - CHEBI:12983
        - CHEBI:12984
        - CHEBI:14333
        - CHEBI:17138
        - CHEBI:181
        - CHEBI:18324
        - CHEBI:21026
        - CHEBI:29052
        - CHEBI:5446
        - CHEBI:58027
        - CHEBI:59776
      - hmdb: HMDB01112
      - inchikey: LXJXRIRHZLFYRP-VKHMYHEASA-L
      - kegg.compound:
        - C00118
        - C00661
      - metanetx.chemical: MNXM74
      - reactome: R-ALL-29578
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00102
        - cpd19005
  - !!omap
    - id: __iPKB_Clostridiaceae__g6p_A_c
    - name: Alpha-D-glucose 6 phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O9P
    - notes: !!omap
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__g6p_A_c:0
      - biocyc: META:ALPHA-GLC-6-P
      - chebi:
        - CHEBI:10245
        - CHEBI:12321
        - CHEBI:17665
        - CHEBI:22389
        - CHEBI:42748
        - CHEBI:58225
      - inchikey: NBSCHQHZLSJFNQ-DVKNGEFBSA-L
      - kegg.compound: C00668
      - metanetx.chemical: MNXM215
      - sbo: SBO:0000247
      - seed.compound: cpd19006
  - !!omap
    - id: g6p_B_c
    - name: beta-D-glucose 6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: g6p_B_c:-2
      - biocyc: META:GLC-6-P
      - chebi:
        - CHEBI:58247
      - hmdb: HMDB03498
      - inchikey: NBSCHQHZLSJFNQ-VFUOTHLCSA-L
      - kegg.compound: C01172
      - metanetx.chemical: MNXM508
      - sbo: SBO:0000247
      - seed.compound: cpd00863
  - !!omap
    - id: g6p_c
    - name: D-glucopyranose 6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: g6p_c:-2
      - biocyc: META:D-glucopyranose-6-phosphate
      - chebi:
        - CHEBI:61548
      - hmdb:
        - HMDB01401
        - HMDB01549
        - HMDB06793
      - inchikey: NBSCHQHZLSJFNQ-GASJEMHNSA-L
      - kegg.compound: C00092
      - metanetx.chemical: MNXM160
      - reactome: R-ALL-1629756
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00079
        - cpd26836
  - !!omap
    - id: gal1p_c
    - name: alpha-D-galactose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: gal1p_c:-2
      - biocyc: META:GALACTOSE-1P
      - chebi:
        - CHEBI:58336
      - hmdb:
        - HMDB00645
        - HMDB03359
        - HMDB62705
      - inchikey: HXXFSFRBOHSIMQ-FPRJBGLDSA-L
      - kegg.compound:
        - C00446
        - C03384
      - metanetx.chemical: MNXM336
      - reactome: R-ALL-30170
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00348
        - cpd19025
  - !!omap
    - id: gal_bD_c
    - name: beta-D-galactose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: gal_bD_c:0
      - biocyc: META:GALACTOSE
      - chebi:
        - CHEBI:27667
      - hmdb: HMDB03449
      - inchikey: WQZGKKKJIJFFOK-FPRJBGLDSA-N
      - kegg.compound: C00962
      - metanetx.chemical: MNXM112
      - sbo: SBO:0000247
      - seed.compound: cpd00709
  - !!omap
    - id: gal_bD_e
    - name: beta-D-galactose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: gal_bD_e:0
      - biocyc: META:GALACTOSE
      - chebi:
        - CHEBI:27667
      - hmdb: HMDB03449
      - inchikey: WQZGKKKJIJFFOK-FPRJBGLDSA-N
      - kegg.compound: C00962
      - metanetx.chemical: MNXM112
      - sbo: SBO:0000247
      - seed.compound: cpd00709
  - !!omap
    - id: gal_bD_p
    - name: beta-D-galactose
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: gal_bD_p:0
      - biocyc: META:GALACTOSE
      - chebi:
        - CHEBI:27667
      - hmdb: HMDB03449
      - inchikey: WQZGKKKJIJFFOK-FPRJBGLDSA-N
      - kegg.compound: C00962
      - metanetx.chemical: MNXM112
      - sbo: SBO:0000247
      - seed.compound: cpd00709
  - !!omap
    - id: gal_c
    - name: alpha-D-galactose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: gal_c:0
      - biocyc:
        - META:ALPHA-D-GALACTOSE
        - META:D-galactopyranose
      - chebi:
        - CHEBI:28061
      - hmdb:
        - HMDB00143
        - HMDB05762
      - inchikey: WQZGKKKJIJFFOK-PHYPRBDBSA-N
      - kegg.compound:
        - C00124
        - C00984
      - kegg.drug: D04291
      - metanetx.chemical: MNXM390
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00108
        - cpd00724
  - !!omap
    - id: gal_e
    - name: alpha-D-galactose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: gal_e:0
      - biocyc:
        - META:ALPHA-D-GALACTOSE
        - META:D-galactopyranose
      - chebi:
        - CHEBI:28061
      - hmdb:
        - HMDB00143
        - HMDB05762
      - inchikey: WQZGKKKJIJFFOK-PHYPRBDBSA-N
      - kegg.compound:
        - C00124
        - C00984
      - kegg.drug: D04291
      - metanetx.chemical: MNXM390
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00108
        - cpd00724
  - !!omap
    - id: gal_p
    - name: alpha-D-galactose
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: gal_p:0
      - biocyc:
        - META:ALPHA-D-GALACTOSE
        - META:D-galactopyranose
      - chebi:
        - CHEBI:28061
      - hmdb:
        - HMDB00143
        - HMDB05762
      - inchikey: WQZGKKKJIJFFOK-PHYPRBDBSA-N
      - kegg.compound:
        - C00124
        - C00984
      - kegg.drug: D04291
      - metanetx.chemical: MNXM390
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00108
        - cpd00724
  - !!omap
    - id: galam6p_c
    - name: D-galactosamine 6-phosphate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C6H13NO8P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H13NO8P
    - annotation: !!omap
      - biggr: galam6p_c:-1
      - biocyc: META:D-GALACTOSAMINE-6-PHOSPHATE
      - chebi:
        - CHEBI:71674
      - inchikey: XHMJOUIAFHJHBW-GASJEMHNSA-M
      - kegg.compound: C06377
      - metanetx.chemical: MNXM5116
      - sbo: SBO:0000247
      - seed.compound: cpd03813
  - !!omap
    - id: galam_e
    - name: 2-ammonio-2-deoxy-D-galactopyranose
    - compartment: C_e
    - charge: 1.0
    - formula: C6H14NO5
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H14NO5
    - annotation: !!omap
      - biggr: galam_e:1
      - chebi:
        - CHEBI:144817
      - metanetx.chemical: MNXM147460
      - sbo: SBO:0000247
  - !!omap
    - id: galam_p
    - name: 2-ammonio-2-deoxy-D-galactopyranose
    - compartment: C_p
    - charge: 1.0
    - formula: C6H14NO5
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H14NO5
    - annotation: !!omap
      - biggr: galam_p:1
      - chebi:
        - CHEBI:144817
      - metanetx.chemical: MNXM147460
      - sbo: SBO:0000247
  - !!omap
    - id: galt1p_c
    - name: galactitol 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H13O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H13O9P
    - annotation: !!omap
      - biggr: galt1p_c:-2
      - biocyc: META:GALACTITOL-1-PHOSPHATE
      - chebi:
        - CHEBI:60083
      - inchikey: GACTWZZMVMUKNG-DPYQTVNSSA-L
      - kegg.compound: C06311
      - metanetx.chemical: MNXM1667
      - sbo: SBO:0000247
      - seed.compound: cpd03752
  - !!omap
    - id: galt_e
    - name: galactitol
    - compartment: C_e
    - charge: 0.0
    - formula: C6H14O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H14O6
    - annotation: !!omap
      - biggr: galt_e:0
      - biocyc: META:GALACTITOL
      - chebi:
        - CHEBI:16813
      - hmdb: HMDB00107
      - inchikey: FBPFZTCFMRRESA-GUCUJZIJSA-N
      - kegg.compound: C01697
      - metanetx.chemical: MNXM1233
      - sbo: SBO:0000247
      - seed.compound: cpd01171
  - !!omap
    - id: gam1p_c
    - name: alpha-D-glucosamine 1-phosphate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C6H13NO8P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H13NO8P
    - annotation: !!omap
      - biggr: gam1p_c:-1
      - biocyc: META:GLUCOSAMINE-1P
      - chebi:
        - CHEBI:58516
      - inchikey: YMJBYRVFGYXULK-QZABAPFNSA-M
      - kegg.compound: C06156
      - metanetx.chemical: MNXM969
      - sbo: SBO:0000247
      - seed.compound: cpd03671
  - !!omap
    - id: gam6p_c
    - name: alpha-D-glucosamine 6-phosphate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C6H13NO8P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H13NO8P
    - annotation: !!omap
      - biggr: gam6p_c:-1
      - biocyc: META:D-GLUCOSAMINE-6-P
      - chebi:
        - CHEBI:75989
      - inchikey: XHMJOUIAFHJHBW-IVMDWMLBSA-M
      - kegg.compound: C00352
      - metanetx.chemical: MNXM370
      - sbo: SBO:0000247
      - seed.compound: cpd00288
  - !!omap
    - id: gam_e
    - name: 2-ammonio-2-deoxy-D-glucopyranose
    - compartment: C_e
    - charge: 1.0
    - formula: C6H14NO5
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H14NO5
    - annotation: !!omap
      - biggr: gam_e:1
      - biocyc: META:GLUCOSAMINE
      - chebi:
        - CHEBI:58723
      - hmdb:
        - HMDB01514
        - HMDB06479
        - HMDB15410
      - inchikey: MSWZFWKMSRAUBD-IVMDWMLBSA-O
      - kegg.compound: C00329
      - kegg.drug: D04334
      - metanetx.chemical: MNXM533
      - reactome: R-ALL-6786660
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00276
        - cpd01247
        - cpd27103
  - !!omap
    - id: gar_c
    - name: N(1)-(5-phospho-beta-D-ribosyl)glycinamide(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C7H14N2O8P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H14N2O8P
    - annotation: !!omap
      - biggr: gar_c:-1
      - biocyc: META:5-PHOSPHO-RIBOSYL-GLYCINEAMIDE
      - chebi:
        - CHEBI:143788
      - hmdb: HMDB02022
      - inchikey: OBQMLSFOUZUIOB-HJZCUYRDSA-M
      - kegg.compound: C03838
      - metanetx.chemical: MNXM463
      - sbo: SBO:0000247
      - seed.compound: cpd02394
  - !!omap
    - id: gcald_c
    - name: glycolaldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C2H4O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H4O2
    - annotation: !!omap
      - biggr: gcald_c:0
      - biocyc: META:GLYCOLALDEHYDE
      - chebi:
        - CHEBI:17071
        - CHEBI:131198
      - hmdb:
        - HMDB02165
        - HMDB03344
      - inchikey: WGCNASOHLSPBMP-UHFFFAOYSA-N
      - kegg.compound: C00266
      - metanetx.chemical: MNXM349
      - sbo: SBO:0000247
      - seed.compound: cpd00229
  - !!omap
    - id: __iPKB_Clostridiaceae__gcvHL_ADPr_c
    - name: N-Lipoyl ADP-ribose gcvh-L protein
    - compartment: C_c
    - charge: 0.0
    - formula: C23H36N6O21P4S2
    - notes: !!omap
      - FORMULA: C23H36N6O21P4S2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gcvHL_ADPr_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gcvHL_nhLA_c
    - name: N-Lipoyl gcvh-L protein
    - compartment: C_c
    - charge: 0.0
    - formula: C8H16NO8P2S2
    - notes: !!omap
      - FORMULA: C8H16NO8P2S2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gcvHL_nhLA_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: gdp_c
    - name: GDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H12N5O11P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H12N5O11P2
    - annotation: !!omap
      - biggr: gdp_c:-3
      - biocyc: META:GDP
      - chebi:
        - CHEBI:58189
      - hmdb: HMDB01201
      - inchikey: QGWNDRXFNXRZMB-UUOKFMHZSA-K
      - kegg.compound: C00035
      - kegg.glycan: G10620
      - metanetx.chemical: MNXM30
      - reactome:
        - R-ALL-111349
        - R-ALL-113525
        - R-ALL-205689
        - R-ALL-29420
      - sbo: SBO:0000247
      - seed.compound: cpd00031
  - !!omap
    - id: __iPKB_Clostridiaceae__gdptp_c
    - name: Guanosine 3'-diphosphate 5'-triphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C10H11N5O20P5
    - notes: !!omap
      - CHARGE: '-7.0'
      - FORMULA: C10H11N5O20P5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gdptp_c:0
      - biocyc: META:GDP-TP
      - chebi:
        - CHEBI:14378
        - CHEBI:14382
        - CHEBI:16690
        - CHEBI:24446
        - CHEBI:5566
        - CHEBI:60028
        - CHEBI:71477
      - hmdb: HMDB60480
      - inchikey: KCPMACXZAITQAX-UUOKFMHZSA-H
      - kegg.compound: C04494
      - metanetx.chemical: MNXM1561
      - sbo: SBO:0000247
      - seed.compound: cpd02740
  - !!omap
    - id: ggdp_c
    - name: 2-trans,6-trans,10-trans-geranylgeranyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C20H33O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C20H33O7P2
    - annotation: !!omap
      - biggr: ggdp_c:-3
      - biocyc: META:GERANYLGERANYL-PP
      - chebi:
        - CHEBI:58756
      - hmdb:
        - HMDB04486
        - HMDB60109
      - inchikey: OINNEUNVOZHBOX-QIRCYJPOSA-K
      - kegg.compound: C00353
      - lipidmaps: LMPR0104010001
      - metanetx.chemical: MNXM139
      - reactome: R-ALL-6806657
      - sbo: SBO:0000247
      - seed.compound: cpd00289
  - !!omap
    - id: glc__bD_c
    - name: beta-D-glucose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: glc__bD_c:0
      - chebi:
        - CHEBI:15903
      - sbo: SBO:0000247
  - !!omap
    - id: glc__D_c
    - name: D-glucopyranose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: glc__D_c:0
      - biocyc: META:Glucopyranose
      - chebi:
        - CHEBI:4167
      - hmdb:
        - HMDB00122
        - HMDB06564
      - inchikey: WQZGKKKJIJFFOK-GASJEMHNSA-N
      - kegg.compound: C00031
      - kegg.drug: D00009
      - metanetx.chemical: MNXM41
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00027
        - cpd26821
  - !!omap
    - id: glc__D_e
    - name: D-glucopyranose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: glc__D_e:0
      - biocyc: META:Glucopyranose
      - chebi:
        - CHEBI:4167
      - hmdb:
        - HMDB00122
        - HMDB06564
      - inchikey: WQZGKKKJIJFFOK-GASJEMHNSA-N
      - kegg.compound: C00031
      - kegg.drug: D00009
      - metanetx.chemical: MNXM41
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00027
        - cpd26821
  - !!omap
    - id: glc__D_p
    - name: D-glucopyranose
    - compartment: C_p
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: glc__D_p:0
      - biocyc: META:Glucopyranose
      - chebi:
        - CHEBI:4167
      - hmdb:
        - HMDB00122
        - HMDB06564
      - inchikey: WQZGKKKJIJFFOK-GASJEMHNSA-N
      - kegg.compound: C00031
      - kegg.drug: D00009
      - metanetx.chemical: MNXM41
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00027
        - cpd26821
  - !!omap
    - id: __iPKB_Clostridiaceae__glc_aD_c
    - name: Alpha D-glucose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__glc_aD_c:0
      - biocyc:
        - META:ALPHA-GLUCOSE
        - META:CPD-15374
        - META:D-Glucose
      - chebi:
        - CHEBI:10242
        - CHEBI:12318
        - CHEBI:17925
        - CHEBI:22386
        - CHEBI:37625
        - CHEBI:40557
        - CHEBI:42756
        - CHEBI:42758
        - CHEBI:42802
      - hmdb: HMDB03345
      - inchikey: WQZGKKKJIJFFOK-DVKNGEFBSA-N
      - kegg.compound: C00267
      - metanetx.chemical: MNXM99
      - reactome:
        - R-ALL-113780
        - R-ALL-1605745
        - R-ALL-70113
        - R-ALL-70115
        - R-ALL-964746
      - sbo: SBO:0000247
      - seed.compound: cpd19001
  - !!omap
    - id: __iPKB_Clostridiaceae__glc_aD_e
    - name: Alpha D-glucose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__glc_aD_e:0
      - biocyc:
        - META:ALPHA-GLUCOSE
        - META:CPD-15374
        - META:D-Glucose
      - chebi:
        - CHEBI:10242
        - CHEBI:12318
        - CHEBI:17925
        - CHEBI:22386
        - CHEBI:37625
        - CHEBI:40557
        - CHEBI:42756
        - CHEBI:42758
        - CHEBI:42802
      - hmdb: HMDB03345
      - inchikey: WQZGKKKJIJFFOK-DVKNGEFBSA-N
      - kegg.compound: C00267
      - metanetx.chemical: MNXM99
      - reactome:
        - R-ALL-113780
        - R-ALL-1605745
        - R-ALL-70113
        - R-ALL-70115
        - R-ALL-964746
      - sbo: SBO:0000247
      - seed.compound: cpd19001
  - !!omap
    - id: __iPKB_Clostridiaceae__glc_bD_c
    - name: D-Glucose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__glc_bD_c:0
      - metanetx.chemical: MNXM722744
      - sbo: SBO:0000247
  - !!omap
    - id: glcn_c
    - name: D-gluconate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H11O7
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H11O7
    - annotation: !!omap
      - biggr: glcn_c:-1
      - biocyc: META:GLUCONATE
      - chebi:
        - CHEBI:18391
      - hmdb:
        - HMDB00625
        - HMDB03373
      - inchikey: RGHNJXZEOKUKBD-SQOUGZDYSA-M
      - kegg.compound: C00257
      - metanetx.chemical: MNXM341
      - sbo: SBO:0000247
      - seed.compound: cpd00222
  - !!omap
    - id: gln__L_c
    - name: L-glutamine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: gln__L_c:0
      - biocyc: META:GLN
      - chebi:
        - CHEBI:58359
        - CHEBI:18050
      - hmdb: HMDB00641
      - inchikey: ZDXPYRJPNDTMRX-VKHMYHEASA-N
      - kegg.compound:
        - C00064
        - C00303
      - kegg.drug: D00015
      - metanetx.chemical: MNXM37
      - reactome:
        - R-ALL-113522
        - R-ALL-212615
        - R-ALL-29472
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00053
        - cpd00253
  - !!omap
    - id: gln__L_e
    - name: L-glutamine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10N2O3
    - annotation: !!omap
      - biggr: gln__L_e:0
      - biocyc: META:GLN
      - chebi:
        - CHEBI:58359
        - CHEBI:18050
      - hmdb: HMDB00641
      - inchikey: ZDXPYRJPNDTMRX-VKHMYHEASA-N
      - kegg.compound:
        - C00064
        - C00303
      - kegg.drug: D00015
      - metanetx.chemical: MNXM37
      - reactome:
        - R-ALL-113522
        - R-ALL-212615
        - R-ALL-29472
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00053
        - cpd00253
  - !!omap
    - id: glu1sa_c
    - name: (S)-4-amino-5-oxopentanoic acid zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO3
    - annotation: !!omap
      - biggr: glu1sa_c:0
      - biocyc: META:GLUTAMATE-1-SEMIALDEHYDE
      - chebi:
        - CHEBI:57501
        - CHEBI:15757
      - inchikey: MPUUQNGXJSEWTF-BYPYZUCNSA-N
      - kegg.compound: C03741
      - metanetx.chemical: MNXM1453
      - sbo: SBO:0000247
      - seed.compound: cpd02345
  - !!omap
    - id: glu5p_c
    - name: L-gamma-glutamyl phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H8NO7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H8NO7P
    - annotation: !!omap
      - biggr: glu5p_c:-2
      - biocyc: META:L-GLUTAMATE-5-P
      - chebi:
        - CHEBI:58274
      - hmdb: HMDB01228
      - inchikey: PJRXVIJAERNUIP-VKHMYHEASA-L
      - kegg.compound: C03287
      - metanetx.chemical: MNXM1280
      - sbo: SBO:0000247
      - seed.compound: cpd02097
  - !!omap
    - id: glusemald_c
    - name: L-glutamic 5-semialdehyde zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO3
    - annotation: !!omap
      - biggr: glusemald_c:0
      - biocyc: META:L-GLUTAMATE_GAMMA-SEMIALDEHYDE
      - chebi:
        - CHEBI:58066
        - CHEBI:17232
      - hmdb: HMDB02104
      - inchikey: KABXUUFDPUOJMW-BYPYZUCNSA-N
      - kegg.compound: C01165
      - metanetx.chemical: MNXM245
      - reactome: R-ALL-31339
      - sbo: SBO:0000247
      - seed.compound: cpd00858
  - !!omap
    - id: glu__D_c
    - name: D-glutamate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C5H8NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H8NO4
    - annotation: !!omap
      - biggr: glu__D_c:-1
      - biocyc: META:D-GLT
      - chebi:
        - CHEBI:29986
      - hmdb: HMDB03339
      - inchikey: WHUUTDBJXJRKMK-GSVOUGTGSA-M
      - kegg.compound: C00217
      - metanetx.chemical: MNXM331
      - sbo: SBO:0000247
      - seed.compound: cpd00186
  - !!omap
    - id: glu__L_c
    - name: L-glutamate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C5H8NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H8NO4
    - annotation: !!omap
      - biggr: glu__L_c:-1
      - biocyc:
        - META:GLT
        - META:Glutamates
      - chebi:
        - CHEBI:29985
      - hmdb:
        - HMDB00148
        - HMDB60475
      - inchikey: WHUUTDBJXJRKMK-VKHMYHEASA-M
      - kegg.compound:
        - C00025
        - C00302
      - kegg.drug:
        - D00007
        - D04341
      - metanetx.chemical: MNXM89557
      - reactome:
        - R-ALL-113552
        - R-ALL-210382
        - R-ALL-29404
        - R-ALL-428614
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00023
        - cpd19002
        - cpd27177
  - !!omap
    - id: glu__L_e
    - name: L-glutamate(1-)
    - compartment: C_e
    - charge: -1.0
    - formula: C5H8NO4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H8NO4
    - annotation: !!omap
      - biggr: glu__L_e:-1
      - biocyc:
        - META:GLT
        - META:Glutamates
      - chebi:
        - CHEBI:29985
      - hmdb:
        - HMDB00148
        - HMDB60475
      - inchikey: WHUUTDBJXJRKMK-VKHMYHEASA-M
      - kegg.compound:
        - C00025
        - C00302
      - kegg.drug:
        - D00007
        - D04341
      - metanetx.chemical: MNXM89557
      - reactome:
        - R-ALL-113552
        - R-ALL-210382
        - R-ALL-29404
        - R-ALL-428614
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00023
        - cpd19002
        - cpd27177
  - !!omap
    - id: glutrna_c
    - name: L-glutamyl-tRNA(Glu)
    - compartment: C_c
    - charge: 0.0
    - formula: C33H41N12O24P3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C33H41N12O24P3
    - annotation: !!omap
      - biggr: glutrna_c:F0
      - chebi:
        - CHEBI:13114
        - CHEBI:29157
        - CHEBI:6232
      - kegg.compound: C02987
      - metanetx.chemical: MNXM89752
      - reactome:
        - R-ALL-379744
        - R-ALL-379751
      - sbo: SBO:0000246
      - seed.compound: cpd12227
  - !!omap
    - id: glx_c
    - name: glyoxylate
    - compartment: C_c
    - charge: -1.0
    - formula: C2HO3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C2HO3
    - annotation: !!omap
      - biggr: glx_c:-1
      - biocyc: META:GLYOX
      - chebi:
        - CHEBI:36655
      - hmdb: HMDB00119
      - inchikey: HHLFWLYXYJOTON-UHFFFAOYSA-M
      - kegg.compound: C00048
      - metanetx.chemical: MNXM69
      - reactome:
        - R-ALL-389678
        - R-ALL-904849
      - sbo: SBO:0000247
      - seed.compound: cpd00040
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_asn__L_c
    - name: Gly asn L C6H11N3O4
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11N3O4
    - notes: !!omap
      - FORMULA: C6H11N3O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_asn__L_c:0
      - metanetx.chemical: MNXM8664
      - sbo: SBO:0000247
      - seed.compound: cpd11581
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_asn__L_e
    - name: Gly asn L C6H11N3O4
    - compartment: C_e
    - charge: 0.0
    - formula: C6H11N3O4
    - notes: !!omap
      - FORMULA: C6H11N3O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_asn__L_e:0
      - metanetx.chemical: MNXM8664
      - sbo: SBO:0000247
      - seed.compound: cpd11581
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_asp__L_c
    - name: Gly asp L C6H9N2O5
    - compartment: C_c
    - charge: 0.0
    - formula: C6H9N2O5
    - notes: !!omap
      - FORMULA: C6H9N2O5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_asp__L_c:0
      - biocyc: META:CPD-13406
      - chebi: CHEBI:73804
      - hmdb: HMDB28837
      - inchikey: SCCPDJAQCXWPTF-VKHMYHEASA-M
      - metanetx.chemical: MNXM722983
      - sbo: SBO:0000247
      - seed.compound:
        - cpd11589
        - cpd30701
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_asp__L_e
    - name: Gly asp L C6H9N2O5
    - compartment: C_e
    - charge: 0.0
    - formula: C6H9N2O5
    - notes: !!omap
      - FORMULA: C6H9N2O5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_asp__L_e:0
      - biocyc: META:CPD-13406
      - chebi: CHEBI:73804
      - hmdb: HMDB28837
      - inchikey: SCCPDJAQCXWPTF-VKHMYHEASA-M
      - metanetx.chemical: MNXM722983
      - sbo: SBO:0000247
      - seed.compound:
        - cpd11589
        - cpd30701
  - !!omap
    - id: gly_c
    - name: glycine
    - compartment: C_c
    - charge: 0.0
    - formula: C2H5NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H5NO2
    - annotation: !!omap
      - biggr: gly_c:0
      - biocyc: META:GLY
      - chebi:
        - CHEBI:57305
        - CHEBI:15428
      - hmdb: HMDB00123
      - inchikey: DHMQDGOQFOQNFH-UHFFFAOYSA-N
      - kegg.compound: C00037
      - kegg.drug: D00011
      - metanetx.chemical: MNXM29
      - reactome:
        - R-ALL-113545
        - R-ALL-159549
        - R-ALL-193446
        - R-ALL-266029
        - R-ALL-29424
      - sbo: SBO:0000247
      - seed.compound: cpd00033
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_cys_c
    - name: Gly-Cys
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11N2O3S
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C5H11N2O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_cys_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_cys_e
    - name: Gly-Cys
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11N2O3S
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C5H10N2O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_cys_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: gly_e
    - name: glycine
    - compartment: C_e
    - charge: 0.0
    - formula: C2H5NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C2H5NO2
    - annotation: !!omap
      - biggr: gly_e:0
      - biocyc: META:GLY
      - chebi:
        - CHEBI:57305
        - CHEBI:15428
      - hmdb: HMDB00123
      - inchikey: DHMQDGOQFOQNFH-UHFFFAOYSA-N
      - kegg.compound: C00037
      - kegg.drug: D00011
      - metanetx.chemical: MNXM29
      - reactome:
        - R-ALL-113545
        - R-ALL-159549
        - R-ALL-193446
        - R-ALL-266029
        - R-ALL-29424
      - sbo: SBO:0000247
      - seed.compound: cpd00033
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_gln_c
    - name: Gly-Gln
    - compartment: C_c
    - charge: 0.0
    - formula: C7H13N3O4
    - notes: !!omap
      - FORMULA: C7H13N3O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_gln_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_gln_e
    - name: Gly-Gln
    - compartment: C_e
    - charge: 0.0
    - formula: C7H13N3O4
    - notes: !!omap
      - FORMULA: C7H13N3O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_gln_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_glu__L_c
    - name: Gly glu L C7H11N2O5
    - compartment: C_c
    - charge: 0.0
    - formula: C7H11N2O5
    - notes: !!omap
      - FORMULA: C7H11N2O5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_glu__L_c:0
      - metanetx.chemical: MNXM8667
      - sbo: SBO:0000247
      - seed.compound: cpd11592
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_glu__L_e
    - name: Gly glu L C7H11N2O5
    - compartment: C_e
    - charge: 0.0
    - formula: C7H11N2O5
    - notes: !!omap
      - FORMULA: C7H11N2O5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_glu__L_e:0
      - metanetx.chemical: MNXM8667
      - sbo: SBO:0000247
      - seed.compound: cpd11592
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_leu_c
    - name: Gly-Leu
    - compartment: C_c
    - charge: 0.0
    - formula: C8H17N2O3
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C8H17N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_leu_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_leu_e
    - name: Gly-Leu
    - compartment: C_e
    - charge: 0.0
    - formula: C8H17N2O3
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C8H16N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_leu_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_met_c
    - name: Gly-Met
    - compartment: C_c
    - charge: 0.0
    - formula: C7H14N2O3S
    - notes: !!omap
      - FORMULA: C7H14N2O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_met_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_met_e
    - name: Gly-Met
    - compartment: C_e
    - charge: 0.0
    - formula: C7H14N2O3S
    - notes: !!omap
      - FORMULA: C7H14N2O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_met_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_phe_c
    - name: Gly-Phe
    - compartment: C_c
    - charge: 0.0
    - formula: C11H15N2O3
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C11H15N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_phe_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_phe_e
    - name: Gly-Phe
    - compartment: C_e
    - charge: 0.0
    - formula: C11H15N2O3
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C11H14N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_phe_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_pro__L_c
    - name: Gly pro L C7H12N2O3
    - compartment: C_c
    - charge: 0.0
    - formula: C7H13N2O3
    - notes: !!omap
      - FORMULA: C7H13N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_pro__L_c:0
      - metanetx.chemical: MNXM8670
      - sbo: SBO:0000247
      - seed.compound: cpd11588
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_pro__L_e
    - name: Gly pro L C7H12N2O3
    - compartment: C_e
    - charge: 0.0
    - formula: C7H13N2O3
    - notes: !!omap
      - FORMULA: C7H13N2O3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_pro__L_e:0
      - metanetx.chemical: MNXM8670
      - sbo: SBO:0000247
      - seed.compound: cpd11588
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_tyr_c
    - name: Gly-Tyr
    - compartment: C_c
    - charge: 0.0
    - formula: C11H15N2O4
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C11H15N2O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_tyr_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__gly_tyr_e
    - name: Gly-Tyr
    - compartment: C_e
    - charge: 0.0
    - formula: C11H15N2O4
    - notes: !!omap
      - CHARGE: '1.0'
      - FORMULA: C11H14N2O4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__gly_tyr_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: glyald_c
    - name: D-glyceraldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C3H6O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H6O3
    - annotation: !!omap
      - biggr: glyald_c:0
      - biocyc: META:GLYCERALD
      - chebi:
        - CHEBI:17378
      - inchikey: MNQZXJOMYWMBOU-VKHMYHEASA-N
      - kegg.compound: C00577
      - metanetx.chemical: MNXM435
      - reactome: R-ALL-30393
      - sbo: SBO:0000247
      - seed.compound: cpd00448
  - !!omap
    - id: glyb_c
    - name: glycine betaine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2
    - annotation: !!omap
      - biggr: glyb_c:0
      - biocyc: META:BETAINE
      - chebi:
        - CHEBI:17750
      - hmdb:
        - HMDB00043
        - HMDB59606
      - inchikey: KWIUHFFTVRNATP-UHFFFAOYSA-N
      - kegg.compound: C00719
      - kegg.drug: D07523
      - metanetx.chemical: MNXM289
      - reactome:
        - R-ALL-352015
        - R-ALL-6798202
      - sbo: SBO:0000247
      - seed.compound: cpd00540
  - !!omap
    - id: glyb_e
    - name: glycine betaine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2
    - annotation: !!omap
      - biggr: glyb_e:0
      - biocyc: META:BETAINE
      - chebi:
        - CHEBI:17750
      - hmdb:
        - HMDB00043
        - HMDB59606
      - inchikey: KWIUHFFTVRNATP-UHFFFAOYSA-N
      - kegg.compound: C00719
      - kegg.drug: D07523
      - metanetx.chemical: MNXM289
      - reactome:
        - R-ALL-352015
        - R-ALL-6798202
      - sbo: SBO:0000247
      - seed.compound: cpd00540
  - !!omap
    - id: glyc3p_c
    - name: sn-glycerol 3-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C3H7O6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C3H7O6P
    - annotation: !!omap
      - biggr: glyc3p_c:-2
      - biocyc: META:GLYCEROL-3P
      - chebi:
        - CHEBI:57597
      - hmdb:
        - HMDB00126
        - HMDB02722
      - inchikey: AWUCVROLDVIAJX-GSVOUGTGSA-L
      - kegg.compound: C00093
      - metanetx.chemical: MNXM66
      - reactome:
        - R-ALL-188458
        - R-ALL-76114
      - sbo: SBO:0000247
      - seed.compound: cpd00080
  - !!omap
    - id: glyc__R_c
    - name: D-glycerate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H5O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H5O4
    - annotation: !!omap
      - biggr: glyc__R_c:-1
      - biocyc: META:GLYCERATE
      - chebi:
        - CHEBI:16659
      - hmdb:
        - HMDB00139
        - HMDB31818
      - inchikey: RBNPOMFGQQGHHO-UWTATZPHSA-M
      - kegg.compound: C00258
      - metanetx.chemical: MNXM189
      - reactome: R-ALL-6799497
      - sbo: SBO:0000247
      - seed.compound: cpd00223
  - !!omap
    - id: glyc_c
    - name: glycerol
    - compartment: C_c
    - charge: 0.0
    - formula: C3H8O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H8O3
    - annotation: !!omap
      - biggr: glyc_c:0
      - biocyc: META:GLYCEROL
      - chebi:
        - CHEBI:17754
      - hmdb: HMDB00131
      - inchikey: PEDCQBHIVMGVHV-UHFFFAOYSA-N
      - kegg.compound: C00116
      - kegg.drug: D00028
      - metanetx.chemical: MNXM89612
      - reactome:
        - R-ALL-192438
        - R-ALL-76116
      - sbo: SBO:0000247
      - seed.compound: cpd00100
  - !!omap
    - id: glyc_p
    - name: glycerol
    - compartment: C_p
    - charge: 0.0
    - formula: C3H8O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H8O3
    - annotation: !!omap
      - biggr: glyc_p:0
      - biocyc: META:GLYCEROL
      - chebi:
        - CHEBI:17754
      - hmdb: HMDB00131
      - inchikey: PEDCQBHIVMGVHV-UHFFFAOYSA-N
      - kegg.compound: C00116
      - kegg.drug: D00028
      - metanetx.chemical: MNXM89612
      - reactome:
        - R-ALL-192438
        - R-ALL-76116
      - sbo: SBO:0000247
      - seed.compound: cpd00100
  - !!omap
    - id: glyclt_c
    - name: glycolate
    - compartment: C_c
    - charge: -1.0
    - formula: C2H3O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C2H3O3
    - annotation: !!omap
      - biggr: glyclt_c:-1
      - biocyc: META:GLYCOLLATE
      - chebi:
        - CHEBI:29805
      - hmdb:
        - HMDB00115
        - HMDB03035
      - inchikey: AEMRFAOFKBGASW-UHFFFAOYSA-M
      - kegg.compound: C00160
      - metanetx.chemical: MNXM222
      - reactome: R-ALL-389822
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00139
        - cpd12347
  - !!omap
    - id: glyclt_e
    - name: glycolate
    - compartment: C_e
    - charge: -1.0
    - formula: C2H3O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C2H3O3
    - annotation: !!omap
      - biggr: glyclt_e:-1
      - biocyc: META:GLYCOLLATE
      - chebi:
        - CHEBI:29805
      - hmdb:
        - HMDB00115
        - HMDB03035
      - inchikey: AEMRFAOFKBGASW-UHFFFAOYSA-M
      - kegg.compound: C00160
      - metanetx.chemical: MNXM222
      - reactome: R-ALL-389822
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00139
        - cpd12347
  - !!omap
    - id: glycogen_c
    - name: Glycogen
    - compartment: C_c
    - charge: 0.0
    - formula: C24H42O21
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C24H42O21
    - annotation: !!omap
      - biggr: glycogen_c:0
      - biocyc: META:Glycogens
      - chebi:
        - CHEBI:24379
        - CHEBI:24384
        - CHEBI:28087
        - CHEBI:5466
      - hmdb: HMDB00757
      - kegg.compound: C00182
      - kegg.glycan: G11603
      - metanetx.chemical: MNXM55375
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00155
        - cpd27186
  - !!omap
    - id: __iPKB_Clostridiaceae__glyglygln_c
    - name: Glycine-glycine-glutamine tripeptide
    - compartment: C_c
    - charge: 0.0
    - formula: C9H18N4O6
    - notes: !!omap
      - FORMULA: C9H18N4O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__glyglygln_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__glyglygln_e
    - name: Glycine-glycine-glutamine tripeptide
    - compartment: C_e
    - charge: 0.0
    - formula: C9H18N4O6
    - notes: !!omap
      - FORMULA: C9H18N4O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__glyglygln_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: gmp_c
    - name: guanosine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H12N5O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H12N5O8P
    - annotation: !!omap
      - biggr: gmp_c:-2
      - biocyc: META:GMP
      - chebi:
        - CHEBI:58115
      - hmdb: HMDB01397
      - inchikey: RQFCJASXJCIDSX-UUOKFMHZSA-L
      - kegg.compound: C00144
      - metanetx.chemical: MNXM113
      - sbo: SBO:0000247
      - seed.compound: cpd00126
  - !!omap
    - id: grdp_c
    - name: geranyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H17O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H17O7P2
    - annotation: !!omap
      - biggr: grdp_c:-3
      - biocyc: META:GERANYL-PP
      - chebi:
        - CHEBI:58057
      - hmdb:
        - HMDB01285
        - HMDB01560
        - HMDB02239
        - HMDB06506
      - inchikey: GVVPGTZRZFNKDS-JXMROGBWSA-K
      - kegg.compound: C00341
      - lipidmaps: LMPR0102010001
      - metanetx.chemical: MNXM100
      - reactome: R-ALL-191409
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00283
        - cpd03476
  - !!omap
    - id: gsn_c
    - name: guanosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H13N5O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H13N5O5
    - annotation: !!omap
      - biggr: gsn_c:0
      - biocyc: META:GUANOSINE
      - chebi:
        - CHEBI:16750
      - hmdb: HMDB00133
      - inchikey: NYHBQMYGNKIUIF-UUOKFMHZSA-N
      - kegg.compound: C00387
      - metanetx.chemical: MNXM401
      - sbo: SBO:0000247
      - seed.compound: cpd00311
  - !!omap
    - id: gthrd_c
    - name: glutathionate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C10H16N3O6S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H16N3O6S
    - annotation: !!omap
      - biggr: gthrd_c:-1
      - biocyc: META:GLUTATHIONE
      - chebi:
        - CHEBI:57925
      - hmdb:
        - HMDB00125
        - HMDB01463
        - HMDB06960
        - HMDB62697
      - inchikey: RWSXRVCMGQZWBV-WDSKDSINSA-M
      - kegg.compound: C00051
      - kegg.drug: D00014
      - metanetx.chemical: MNXM57
      - reactome:
        - R-ALL-1247892
        - R-ALL-1500783
        - R-ALL-158543
        - R-ALL-1655887
        - R-ALL-29450
      - sbo: SBO:0000247
      - seed.compound: cpd00042
  - !!omap
    - id: gthrd_e
    - name: glutathionate(1-)
    - compartment: C_e
    - charge: -1.0
    - formula: C10H16N3O6S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H16N3O6S
    - annotation: !!omap
      - biggr: gthrd_e:-1
      - biocyc: META:GLUTATHIONE
      - chebi:
        - CHEBI:57925
      - hmdb:
        - HMDB00125
        - HMDB01463
        - HMDB06960
        - HMDB62697
      - inchikey: RWSXRVCMGQZWBV-WDSKDSINSA-M
      - kegg.compound: C00051
      - kegg.drug: D00014
      - metanetx.chemical: MNXM57
      - reactome:
        - R-ALL-1247892
        - R-ALL-1500783
        - R-ALL-158543
        - R-ALL-1655887
        - R-ALL-29450
      - sbo: SBO:0000247
      - seed.compound: cpd00042
  - !!omap
    - id: gthrd_p
    - name: glutathionate(1-)
    - compartment: C_p
    - charge: -1.0
    - formula: C10H16N3O6S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H16N3O6S
    - annotation: !!omap
      - biggr: gthrd_p:-1
      - biocyc: META:GLUTATHIONE
      - chebi:
        - CHEBI:57925
      - hmdb:
        - HMDB00125
        - HMDB01463
        - HMDB06960
        - HMDB62697
      - inchikey: RWSXRVCMGQZWBV-WDSKDSINSA-M
      - kegg.compound: C00051
      - kegg.drug: D00014
      - metanetx.chemical: MNXM57
      - reactome:
        - R-ALL-1247892
        - R-ALL-1500783
        - R-ALL-158543
        - R-ALL-1655887
        - R-ALL-29450
      - sbo: SBO:0000247
      - seed.compound: cpd00042
  - !!omap
    - id: gtp_c
    - name: GTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H12N5O14P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H12N5O14P3
    - annotation: !!omap
      - biggr: gtp_c:-4
      - biocyc: META:GTP
      - chebi:
        - CHEBI:37565
      - hmdb: HMDB01273
      - inchikey: XKMLYUALXHKNFT-UUOKFMHZSA-J
      - kegg.compound: C00044
      - metanetx.chemical: MNXM51
      - reactome:
        - R-ALL-113573
        - R-ALL-29438
      - sbo: SBO:0000247
      - seed.compound: cpd00038
  - !!omap
    - id: gua_c
    - name: guanine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H5N5O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H5N5O
    - annotation: !!omap
      - biggr: gua_c:0
      - biocyc: META:GUANINE
      - chebi:
        - CHEBI:16235
      - hmdb: HMDB00132
      - inchikey: UYTPUPDQBNUYGX-UHFFFAOYSA-N
      - kegg.compound: C00242
      - metanetx.chemical: MNXM259
      - reactome: R-ALL-83956
      - sbo: SBO:0000247
      - seed.compound: cpd00207
  - !!omap
    - id: gua_e
    - name: guanine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H5N5O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H5N5O
    - annotation: !!omap
      - biggr: gua_e:0
      - biocyc: META:GUANINE
      - chebi:
        - CHEBI:16235
      - hmdb: HMDB00132
      - inchikey: UYTPUPDQBNUYGX-UHFFFAOYSA-N
      - kegg.compound: C00242
      - metanetx.chemical: MNXM259
      - reactome: R-ALL-83956
      - sbo: SBO:0000247
      - seed.compound: cpd00207
  - !!omap
    - id: gua_p
    - name: guanine
    - compartment: C_p
    - charge: 0.0
    - formula: C5H5N5O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H5N5O
    - annotation: !!omap
      - biggr: gua_p:0
      - biocyc: META:GUANINE
      - chebi:
        - CHEBI:16235
      - hmdb: HMDB00132
      - inchikey: UYTPUPDQBNUYGX-UHFFFAOYSA-N
      - kegg.compound: C00242
      - metanetx.chemical: MNXM259
      - reactome: R-ALL-83956
      - sbo: SBO:0000247
      - seed.compound: cpd00207
  - !!omap
    - id: h2_c
    - name: dihydrogen
    - compartment: C_c
    - charge: 0.0
    - formula: H2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2
    - annotation: !!omap
      - biggr: h2_c:0
      - biocyc: META:HYDROGEN-MOLECULE
      - chebi:
        - CHEBI:18276
      - hmdb: HMDB01362
      - inchikey: UFHFLCQGNIYNRP-UHFFFAOYSA-N
      - kegg.compound: C00282
      - metanetx.chemical: MNXM195
      - reactome: R-ALL-113555
      - sbo: SBO:0000247
      - seed.compound: cpd11640
  - !!omap
    - id: h2_e
    - name: dihydrogen
    - compartment: C_e
    - charge: 0.0
    - formula: H2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2
    - annotation: !!omap
      - biggr: h2_e:0
      - biocyc: META:HYDROGEN-MOLECULE
      - chebi:
        - CHEBI:18276
      - hmdb: HMDB01362
      - inchikey: UFHFLCQGNIYNRP-UHFFFAOYSA-N
      - kegg.compound: C00282
      - metanetx.chemical: MNXM195
      - reactome: R-ALL-113555
      - sbo: SBO:0000247
      - seed.compound: cpd11640
  - !!omap
    - id: h2_p
    - name: dihydrogen
    - compartment: C_p
    - charge: 0.0
    - formula: H2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2
    - annotation: !!omap
      - biggr: h2_p:0
      - biocyc: META:HYDROGEN-MOLECULE
      - chebi:
        - CHEBI:18276
      - hmdb: HMDB01362
      - inchikey: UFHFLCQGNIYNRP-UHFFFAOYSA-N
      - kegg.compound: C00282
      - metanetx.chemical: MNXM195
      - reactome: R-ALL-113555
      - sbo: SBO:0000247
      - seed.compound: cpd11640
  - !!omap
    - id: h2co3_c:0
    - name: carbonic acid
    - compartment: C_c
    - charge: 0.0
    - formula: CH2O3
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: CH2O3
    - annotation: !!omap
      - biggr: h2co3_c:0
      - chebi:
        - CHEBI:28976
      - metanetx.chemical: MNXM96530
      - sbo: SBO:0000247
  - !!omap
    - id: h2mb4p_c
    - name: (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C5H9O8P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C5H9O8P2
    - annotation: !!omap
      - biggr: h2mb4p_c:-3
      - biocyc: META:HYDROXY-METHYL-BUTENYL-DIP
      - chebi:
        - CHEBI:128753
      - inchikey: MDSIZRKJVDMQOQ-GORDUTHDSA-K
      - kegg.compound: C11811
      - lipidmaps: LMPR01010009
      - metanetx.chemical: MNXM606
      - sbo: SBO:0000247
      - seed.compound:
        - cpd08615
        - cpd29213
  - !!omap
    - id: h2o2_c
    - name: hydrogen peroxide
    - compartment: C_c
    - charge: 0.0
    - formula: H2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2O2
    - annotation: !!omap
      - biggr: h2o2_c:0
      - biocyc: META:HYDROGEN-PEROXIDE
      - chebi:
        - CHEBI:16240
      - hmdb:
        - HMDB03125
        - HMDB06491
      - inchikey: MHAJPDPJQMAIIY-UHFFFAOYSA-N
      - kegg.compound: C00027
      - kegg.drug: D00008
      - metanetx.chemical: MNXM22
      - reactome:
        - R-ALL-113575
        - R-ALL-1614617
        - R-ALL-189481
        - R-ALL-29408
        - R-ALL-351629
      - sbo: SBO:0000247
      - seed.compound: cpd00025
  - !!omap
    - id: h2o_c
    - name: water
    - compartment: C_c
    - charge: 0.0
    - formula: H2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2O
    - annotation: !!omap
      - biggr: h2o_c:0
      - biocyc:
        - META:CPD-15815
        - META:HYDROXYL-GROUP
        - META:OH
        - META:OXONIUM
        - META:WATER
      - chebi:
        - CHEBI:15377
      - hmdb:
        - HMDB01039
        - HMDB02111
      - inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N
      - kegg.compound:
        - C00001
        - C01328
      - kegg.drug:
        - D00001
        - D06322
      - metanetx.chemical: MNXM2
      - reactome:
        - R-ALL-109276
        - R-ALL-113518
        - R-ALL-113519
        - R-ALL-113521
        - R-ALL-141343
        - R-ALL-1605715
        - R-ALL-189422
        - R-ALL-2022884
        - R-ALL-29356
        - R-ALL-351603
        - R-ALL-5278291
        - R-ALL-5668574
        - R-ALL-5693747
        - R-ALL-8851517
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00001
        - cpd15275
        - cpd27222
  - !!omap
    - id: h2o_e
    - name: water
    - compartment: C_e
    - charge: 0.0
    - formula: H2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2O
    - annotation: !!omap
      - biggr: h2o_e:0
      - biocyc:
        - META:CPD-15815
        - META:HYDROXYL-GROUP
        - META:OH
        - META:OXONIUM
        - META:WATER
      - chebi:
        - CHEBI:15377
      - hmdb:
        - HMDB01039
        - HMDB02111
      - inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N
      - kegg.compound:
        - C00001
        - C01328
      - kegg.drug:
        - D00001
        - D06322
      - metanetx.chemical: MNXM2
      - reactome:
        - R-ALL-109276
        - R-ALL-113518
        - R-ALL-113519
        - R-ALL-113521
        - R-ALL-141343
        - R-ALL-1605715
        - R-ALL-189422
        - R-ALL-2022884
        - R-ALL-29356
        - R-ALL-351603
        - R-ALL-5278291
        - R-ALL-5668574
        - R-ALL-5693747
        - R-ALL-8851517
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00001
        - cpd15275
        - cpd27222
  - !!omap
    - id: h2o_p
    - name: water
    - compartment: C_p
    - charge: 0.0
    - formula: H2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: H2O
    - annotation: !!omap
      - biggr: h2o_p:0
      - biocyc:
        - META:CPD-15815
        - META:HYDROXYL-GROUP
        - META:OH
        - META:OXONIUM
        - META:WATER
      - chebi:
        - CHEBI:15377
      - hmdb:
        - HMDB01039
        - HMDB02111
      - inchikey: XLYOFNOQVPJJNP-UHFFFAOYSA-N
      - kegg.compound:
        - C00001
        - C01328
      - kegg.drug:
        - D00001
        - D06322
      - metanetx.chemical: MNXM2
      - reactome:
        - R-ALL-109276
        - R-ALL-113518
        - R-ALL-113519
        - R-ALL-113521
        - R-ALL-141343
        - R-ALL-1605715
        - R-ALL-189422
        - R-ALL-2022884
        - R-ALL-29356
        - R-ALL-351603
        - R-ALL-5278291
        - R-ALL-5668574
        - R-ALL-5693747
        - R-ALL-8851517
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00001
        - cpd15275
        - cpd27222
  - !!omap
    - id: h2s_c
    - name: hydrogen sulfide
    - compartment: C_c
    - charge: 0.0
    - formula: H2S
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: H2S
    - annotation: !!omap
      - biggr: h2s_c:0
      - biocyc:
        - META:CPD-7046
        - META:CPD-846
        - META:HS
      - chebi:
        - CHEBI:16136
      - hmdb:
        - HMDB00598
        - HMDB03276
      - inchikey: RWSOTUBLDIXVET-UHFFFAOYSA-M
      - kegg.compound: C00283
      - metanetx.chemical: MNXM89582
      - reactome:
        - R-ALL-1614532
        - R-ALL-1655881
        - R-ALL-1663154
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00239
        - cpd24697
  - !!omap
    - id: h2s_e
    - name: hydrogen sulfide
    - compartment: C_e
    - charge: 0.0
    - formula: H2S
    - notes: !!omap
      - CHARGE: '0.0'
      - FORMULA: H2S
    - annotation: !!omap
      - biggr: h2s_e:0
      - biocyc:
        - META:CPD-7046
        - META:CPD-846
        - META:HS
      - chebi:
        - CHEBI:16136
      - hmdb:
        - HMDB00598
        - HMDB03276
      - inchikey: RWSOTUBLDIXVET-UHFFFAOYSA-M
      - kegg.compound: C00283
      - metanetx.chemical: MNXM89582
      - reactome:
        - R-ALL-1614532
        - R-ALL-1655881
        - R-ALL-1663154
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00239
        - cpd24697
  - !!omap
    - id: h_c
    - name: hydron
    - compartment: C_c
    - charge: 1.0
    - formula: H
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: H
    - annotation: !!omap
      - biggr: h_c:1
      - biocyc: META:PROTON
      - chebi:
        - CHEBI:15378
      - hmdb: HMDB59597
      - inchikey: GPRLSGONYQIRFK-UHFFFAOYSA-N
      - kegg.compound: C00080
      - metanetx.chemical: MNXM1
      - reactome:
        - R-ALL-1132304
        - R-ALL-113529
        - R-ALL-1470067
        - R-ALL-156540
        - R-ALL-163953
        - R-ALL-193465
        - R-ALL-194688
        - R-ALL-2000349
        - R-ALL-2872447
        - R-ALL-351626
        - R-ALL-372511
        - R-ALL-374900
        - R-ALL-425969
        - R-ALL-425978
        - R-ALL-425999
        - R-ALL-427899
        - R-ALL-428040
        - R-ALL-428548
        - R-ALL-5668577
        - R-ALL-70106
        - R-ALL-74722
      - sbo: SBO:0000247
      - seed.compound: cpd00067
  - !!omap
    - id: h_e
    - name: hydron
    - compartment: C_e
    - charge: 1.0
    - formula: H
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: H
    - annotation: !!omap
      - biggr: h_e:1
      - biocyc: META:PROTON
      - chebi:
        - CHEBI:15378
      - hmdb: HMDB59597
      - inchikey: GPRLSGONYQIRFK-UHFFFAOYSA-N
      - kegg.compound: C00080
      - metanetx.chemical: MNXM1
      - reactome:
        - R-ALL-1132304
        - R-ALL-113529
        - R-ALL-1470067
        - R-ALL-156540
        - R-ALL-163953
        - R-ALL-193465
        - R-ALL-194688
        - R-ALL-2000349
        - R-ALL-2872447
        - R-ALL-351626
        - R-ALL-372511
        - R-ALL-374900
        - R-ALL-425969
        - R-ALL-425978
        - R-ALL-425999
        - R-ALL-427899
        - R-ALL-428040
        - R-ALL-428548
        - R-ALL-5668577
        - R-ALL-70106
        - R-ALL-74722
      - sbo: SBO:0000247
      - seed.compound: cpd00067
  - !!omap
    - id: h_p
    - name: hydron
    - compartment: C_p
    - charge: 1.0
    - formula: H
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: H
    - annotation: !!omap
      - biggr: h_p:1
      - biocyc: META:PROTON
      - chebi:
        - CHEBI:15378
      - hmdb: HMDB59597
      - inchikey: GPRLSGONYQIRFK-UHFFFAOYSA-N
      - kegg.compound: C00080
      - metanetx.chemical: MNXM1
      - reactome:
        - R-ALL-1132304
        - R-ALL-113529
        - R-ALL-1470067
        - R-ALL-156540
        - R-ALL-163953
        - R-ALL-193465
        - R-ALL-194688
        - R-ALL-2000349
        - R-ALL-2872447
        - R-ALL-351626
        - R-ALL-372511
        - R-ALL-374900
        - R-ALL-425969
        - R-ALL-425978
        - R-ALL-425999
        - R-ALL-427899
        - R-ALL-428040
        - R-ALL-428548
        - R-ALL-5668577
        - R-ALL-70106
        - R-ALL-74722
      - sbo: SBO:0000247
      - seed.compound: cpd00067
  - !!omap
    - id: ham_c
    - name: hydroxylamine
    - compartment: C_c
    - charge: 0.0
    - formula: H3NO
    - notes: !!omap
      - FORMULA: H3NO
    - annotation: !!omap
      - biggr: ham_c:0
      - biocyc: META:HYDROXYLAMINE
      - chebi:
        - CHEBI:15429
      - hmdb:
        - HMDB03338
        - HMDB32439
        - HMDB60880
      - inchikey: AVXURJPOCDRRFD-UHFFFAOYSA-N
      - kegg.compound: C00192
      - metanetx.chemical: MNXM433
      - sbo: SBO:0000247
      - seed.compound: cpd00165
  - !!omap
    - id: ham_e
    - name: hydroxylamine
    - compartment: C_e
    - charge: 0.0
    - formula: H3NO
    - notes: !!omap
      - FORMULA: H3NO
    - annotation: !!omap
      - biggr: ham_e:0
      - biocyc: META:HYDROXYLAMINE
      - chebi:
        - CHEBI:15429
      - hmdb:
        - HMDB03338
        - HMDB32439
        - HMDB60880
      - inchikey: AVXURJPOCDRRFD-UHFFFAOYSA-N
      - kegg.compound: C00192
      - metanetx.chemical: MNXM433
      - sbo: SBO:0000247
      - seed.compound: cpd00165
  - !!omap
    - id: h2co3_c:-1
    - name: hydrogencarbonate
    - compartment: C_c
    - charge: -1.0
    - formula: CHO3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: CHO3
    - annotation: !!omap
      - biggr: h2co3_c:-1
      - biocyc:
        - META:CO3
        - META:H2CO3
        - META:HCO3
      - chebi:
        - CHEBI:17544
      - hmdb:
        - HMDB00595
        - HMDB03538
        - HMDB31453
      - inchikey: BVKZGUZCCUSVTD-UHFFFAOYSA-M
      - kegg.compound:
        - C00288
        - C01353
      - metanetx.chemical: MNXM60
      - reactome:
        - R-ALL-111627
        - R-ALL-29896
        - R-ALL-425425
      - sbo: SBO:0000247
      - seed.compound: cpd00242
  - !!omap
    - id: hcys__L_c
    - name: L-homocysteine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C4H9NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO2S
    - annotation: !!omap
      - biggr: hcys__L_c:0
      - biocyc: META:HOMO-CYS
      - chebi:
        - CHEBI:58199
        - CHEBI:17588
      - hmdb:
        - HMDB00165
        - HMDB00742
      - inchikey: FFFHZYDWPBMWHY-UHFFFAOYSA-N
      - kegg.compound:
        - C00155
        - C05330
      - metanetx.chemical: MNXM123
      - reactome: R-ALL-174369
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00135
        - cpd19034
  - !!omap
    - id: hdca_c
    - name: hexadecanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C16H31O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C16H31O2
    - annotation: !!omap
      - biggr: hdca_c:-1
      - biocyc: META:PALMITATE
      - chebi:
        - CHEBI:7896
      - hmdb:
        - HMDB00220
        - HMDB60083
      - inchikey: IPCSVZSSVZVIGE-UHFFFAOYSA-M
      - kegg.compound: C00249
      - kegg.drug: D05341
      - lipidmaps:
        - LMFA01010001
        - LMFA01010046
      - metanetx.chemical: MNXM108
      - reactome:
        - R-ALL-2453691
        - R-ALL-3632881
        - R-ALL-390435
        - R-ALL-426576
        - R-ALL-5690516
        - R-ALL-76168
      - sbo: SBO:0000247
      - seed.compound: cpd00214
  - !!omap
    - id: hdd2coa_c
    - name: (E)-hexadec-2-enoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C37H60N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C37H60N7O17P3S
    - annotation: !!omap
      - biggr: hdd2coa_c:-4
      - biocyc: META:CPD0-2117
      - chebi:
        - CHEBI:61526
      - hmdb:
        - HMDB03945
        - HMDB06533
      - inchikey: JUPAQFRKPHPXLD-MSHHSVQMSA-J
      - kegg.compound: C05272
      - lipidmaps:
        - LMFA07050020
        - LMFA07050144
      - metanetx.chemical: MNXM581
      - reactome: R-ALL-77284
      - sbo: SBO:0000247
      - seed.compound: cpd03126
  - !!omap
    - id: his__L_c
    - name: L-histidine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C6H9N3O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H9N3O2
    - annotation: !!omap
      - biggr: his__L_c:0
      - biocyc: META:HIS
      - chebi:
        - CHEBI:57595
        - CHEBI:15971
      - hmdb:
        - HMDB00177
        - HMDB03412
      - inchikey: HNDVDQJCIGZPNO-YFKPBYRVSA-N
      - kegg.compound:
        - C00135
        - C00768
      - kegg.drug: D00032
      - metanetx.chemical: MNXM134
      - reactome:
        - R-ALL-29612
        - R-ALL-379695
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00119
        - cpd00572
  - !!omap
    - id: his__L_e
    - name: L-histidine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C6H9N3O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H9N3O2
    - annotation: !!omap
      - biggr: his__L_e:0
      - biocyc: META:HIS
      - chebi:
        - CHEBI:57595
        - CHEBI:15971
      - hmdb:
        - HMDB00177
        - HMDB03412
      - inchikey: HNDVDQJCIGZPNO-YFKPBYRVSA-N
      - kegg.compound:
        - C00135
        - C00768
      - kegg.drug: D00032
      - metanetx.chemical: MNXM134
      - reactome:
        - R-ALL-29612
        - R-ALL-379695
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00119
        - cpd00572
  - !!omap
    - id: hisp_c
    - name: L-histidinol phosphate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C6H11N3O4P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H11N3O4P
    - annotation: !!omap
      - biggr: hisp_c:-1
      - biocyc: META:L-HISTIDINOL-P
      - chebi:
        - CHEBI:57980
      - inchikey: CWNDERHTHMWBSI-YFKPBYRVSA-M
      - kegg.compound: C01100
      - metanetx.chemical: MNXM1482
      - sbo: SBO:0000247
      - seed.compound: cpd00807
  - !!omap
    - id: histd_c
    - name: L-histidinol(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: C6H12N3O
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H12N3O
    - annotation: !!omap
      - biggr: histd_c:1
      - biocyc: META:HISTIDINOL
      - chebi:
        - CHEBI:57699
      - hmdb: HMDB03431
      - inchikey: ZQISRDCJNBUVMM-YFKPBYRVSA-O
      - kegg.compound: C00860
      - metanetx.chemical: MNXM1281
      - sbo: SBO:0000247
      - seed.compound: cpd00641
  - !!omap
    - id: hmbil_c
    - name: preuroporphyrinogen(8-)
    - compartment: C_c
    - charge: -8.0
    - formula: C40H38N4O17
    - notes: !!omap
      - CHARGE: '-8'
      - FORMULA: C40H38N4O17
    - annotation: !!omap
      - biggr: hmbil_c:-8
      - biocyc: META:HYDROXYMETHYLBILANE
      - chebi:
        - CHEBI:57845
      - hmdb: HMDB01137
      - inchikey: WDFJYRZCZIUBPR-UHFFFAOYSA-F
      - kegg.compound: C01024
      - metanetx.chemical: MNXM547
      - reactome: R-ALL-189449
      - sbo: SBO:0000247
      - seed.compound: cpd00755
  - !!omap
    - id: hom__L_c
    - name: L-homoserine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C4H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO3
    - annotation: !!omap
      - biggr: hom__L_c:0
      - biocyc: META:HOMO-SER
      - chebi:
        - CHEBI:57476
        - CHEBI:15699
      - hmdb: HMDB00719
      - inchikey: UKAUYVFTDYCKQA-VKHMYHEASA-N
      - kegg.compound: C00263
      - metanetx.chemical: MNXM353
      - sbo: SBO:0000247
      - seed.compound: cpd00227
  - !!omap
    - id: hpglu_c
    - name: tetrahydropteroyltri-L-glutamate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C29H33N9O12
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C29H33N9O12
    - annotation: !!omap
      - biggr: hpglu_c:-4
      - biocyc: META:CPD-1301
      - chebi:
        - CHEBI:58140
      - hmdb: HMDB12290
      - inchikey: RXWVHRYZTWZATH-XSLAGTTESA-J
      - kegg.compound: C04144
      - metanetx.chemical: MNXM2563
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02555
        - cpd23695
  - !!omap
    - id: hpyr_c
    - name: 3-hydroxypyruvate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H3O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H3O4
    - annotation: !!omap
      - biggr: hpyr_c:-1
      - biocyc: META:OH-PYR
      - chebi:
        - CHEBI:17180
      - hmdb: HMDB01352
      - inchikey: HHDDCCUIIUWNGJ-UHFFFAOYSA-M
      - kegg.compound: C00168
      - metanetx.chemical: MNXM392
      - sbo: SBO:0000247
      - seed.compound: cpd00145
  - !!omap
    - id: hqn_c
    - name: hydroquinone
    - compartment: C_c
    - charge: 0.0
    - formula: C6H6O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H6O2
    - annotation: !!omap
      - biggr: hqn_c:0
      - biocyc: META:HYDROQUINONE
      - chebi:
        - CHEBI:17594
      - hmdb: HMDB02434
      - inchikey: QIGBRXMKCJKVMJ-UHFFFAOYSA-N
      - kegg.compound: C00530
      - kegg.drug: D00073
      - metanetx.chemical: MNXM376
      - sbo: SBO:0000247
      - seed.compound: cpd00415
  - !!omap
    - id: hqn_e
    - name: hydroquinone
    - compartment: C_e
    - charge: 0.0
    - formula: C6H6O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H6O2
    - annotation: !!omap
      - biggr: hqn_e:0
      - biocyc: META:HYDROQUINONE
      - chebi:
        - CHEBI:17594
      - hmdb: HMDB02434
      - inchikey: QIGBRXMKCJKVMJ-UHFFFAOYSA-N
      - kegg.compound: C00530
      - kegg.drug: D00073
      - metanetx.chemical: MNXM376
      - sbo: SBO:0000247
      - seed.compound: cpd00415
  - !!omap
    - id: hx2coa_c
    - name: trans-hex-2-enoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C27H40N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C27H40N7O17P3S
    - annotation: !!omap
      - biggr: hx2coa_c:-4
      - biocyc: META:CPD0-2121
      - chebi:
        - CHEBI:62077
      - inchikey: OINXHIBNZUUIMR-IXUYQXAASA-J
      - kegg.compound: C05271
      - lipidmaps:
        - LMFA07050019
        - LMFA07050393
      - metanetx.chemical: MNXM753
      - reactome: R-ALL-77324
      - sbo: SBO:0000247
      - seed.compound: cpd03125
  - !!omap
    - id: hxan_c
    - name: hypoxanthine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H4N4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H4N4O
    - annotation: !!omap
      - biggr: hxan_c:0
      - biocyc: META:HYPOXANTHINE
      - chebi:
        - CHEBI:17368
      - hmdb: HMDB00157
      - inchikey: FDGQSTZJBFJUBT-UHFFFAOYSA-N
      - kegg.compound: C00262
      - metanetx.chemical: MNXM213
      - reactome: R-ALL-113599
      - sbo: SBO:0000247
      - seed.compound: cpd00226
  - !!omap
    - id: hxan_e
    - name: hypoxanthine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H4N4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H4N4O
    - annotation: !!omap
      - biggr: hxan_e:0
      - biocyc: META:HYPOXANTHINE
      - chebi:
        - CHEBI:17368
      - hmdb: HMDB00157
      - inchikey: FDGQSTZJBFJUBT-UHFFFAOYSA-N
      - kegg.compound: C00262
      - metanetx.chemical: MNXM213
      - reactome: R-ALL-113599
      - sbo: SBO:0000247
      - seed.compound: cpd00226
  - !!omap
    - id: hxan_p
    - name: hypoxanthine
    - compartment: C_p
    - charge: 0.0
    - formula: C5H4N4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H4N4O
    - annotation: !!omap
      - biggr: hxan_p:0
      - biocyc: META:HYPOXANTHINE
      - chebi:
        - CHEBI:17368
      - hmdb: HMDB00157
      - inchikey: FDGQSTZJBFJUBT-UHFFFAOYSA-N
      - kegg.compound: C00262
      - metanetx.chemical: MNXM213
      - reactome: R-ALL-113599
      - sbo: SBO:0000247
      - seed.compound: cpd00226
  - !!omap
    - id: hxcoa_c
    - name: hexanoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C27H42N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C27H42N7O17P3S
    - annotation: !!omap
      - biggr: hxcoa_c:-4
      - chebi:
        - CHEBI:62620
      - metanetx.chemical: MNXM162502
      - sbo: SBO:0000247
  - !!omap
    - id: iasp_c
    - name: iminoaspartate
    - compartment: C_c
    - charge: -2.0
    - formula: C4H3NO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H3NO4
    - annotation: !!omap
      - biggr: iasp_c:-2
      - biocyc: META:IMINOASPARTATE
      - chebi:
        - CHEBI:58831
      - hmdb: HMDB01131
      - inchikey: NMUOATVLLQEYHI-UHFFFAOYSA-M
      - kegg.compound: C05840
      - lipidmaps: LMFA01170110
      - metanetx.chemical: MNXM599
      - sbo: SBO:0000247
      - seed.compound: cpd03470
  - !!omap
    - id: ichor_c
    - name: isochorismate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H8O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H8O6
    - annotation: !!omap
      - biggr: ichor_c:-2
      - biocyc: META:ISOCHORISMATE
      - chebi:
        - CHEBI:29780
      - inchikey: NTGWPRCCOQCMGE-YUMQZZPRSA-L
      - kegg.compound: C00885
      - metanetx.chemical: MNXM799
      - sbo: SBO:0000247
      - seed.compound: cpd00658
  - !!omap
    - id: icit_c
    - name: isocitrate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C6H5O7
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C6H5O7
    - annotation: !!omap
      - biggr: icit_c:-3
      - chebi:
        - CHEBI:16087
      - hmdb: HMDB00193
      - inchikey: ODBLHEXUDAPZAU-UHFFFAOYSA-K
      - kegg.compound: C00311
      - metanetx.chemical: MNXM89661
      - sbo: SBO:0000247
      - seed.compound: cpd00260
  - !!omap
    - id: idp_c
    - name: IDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H11N4O11P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H11N4O11P2
    - annotation: !!omap
      - biggr: idp_c:-3
      - biocyc: META:IDP
      - chebi:
        - CHEBI:58280
      - hmdb: HMDB03335
      - inchikey: JPXZQMKKFWMMGK-KQYNXXCUSA-K
      - kegg.compound: C00104
      - metanetx.chemical: MNXM495
      - reactome: R-ALL-2509811
      - sbo: SBO:0000247
      - seed.compound: cpd00090
  - !!omap
    - id: ile__L_c
    - name: L-isoleucine
    - compartment: C_c
    - charge: 0.0
    - formula: C6H13NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H13NO2
    - annotation: !!omap
      - biggr: ile__L_c:0
      - biocyc: META:ILE
      - chebi:
        - CHEBI:58045
        - CHEBI:17191
      - hmdb: HMDB00172
      - inchikey: AGPKZVBTJJNPAG-WHFBIAKZSA-N
      - kegg.compound: C00407
      - kegg.drug: D00065
      - lipidmaps: LMFA01100047
      - metanetx.chemical: MNXM231
      - reactome:
        - R-ALL-113537
        - R-ALL-30102
      - sbo: SBO:0000247
      - seed.compound: cpd00322
  - !!omap
    - id: ile__L_e
    - name: L-isoleucine
    - compartment: C_e
    - charge: 0.0
    - formula: C6H13NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H13NO2
    - annotation: !!omap
      - biggr: ile__L_e:0
      - biocyc: META:ILE
      - chebi:
        - CHEBI:58045
        - CHEBI:17191
      - hmdb: HMDB00172
      - inchikey: AGPKZVBTJJNPAG-WHFBIAKZSA-N
      - kegg.compound: C00407
      - kegg.drug: D00065
      - lipidmaps: LMFA01100047
      - metanetx.chemical: MNXM231
      - reactome:
        - R-ALL-113537
        - R-ALL-30102
      - sbo: SBO:0000247
      - seed.compound: cpd00322
  - !!omap
    - id: imacp_c
    - name: 3-(imidazol-4-yl)-2-oxopropyl phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H7N2O5P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H7N2O5P
    - annotation: !!omap
      - biggr: imacp_c:-2
      - biocyc: META:IMIDAZOLE-ACETOL-P
      - chebi:
        - CHEBI:57766
      - hmdb: HMDB12236
      - inchikey: YCFFMSOLUMRAMD-UHFFFAOYSA-L
      - kegg.compound: C01267
      - metanetx.chemical: MNXM1456
      - sbo: SBO:0000247
      - seed.compound: cpd00930
  - !!omap
    - id: imp_c
    - name: IMP(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H11N4O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H11N4O8P
    - annotation: !!omap
      - biggr: imp_c:-2
      - biocyc: META:IMP
      - chebi:
        - CHEBI:58053
      - hmdb: HMDB00175
      - inchikey: GRSZFWQUAKGDAV-KQYNXXCUSA-L
      - kegg.compound: C00130
      - metanetx.chemical: MNXM125
      - reactome:
        - R-ALL-2509792
        - R-ALL-29602
      - sbo: SBO:0000247
      - seed.compound: cpd00114
  - !!omap
    - id: indole_c
    - name: 3H-indole
    - compartment: C_c
    - charge: 0.0
    - formula: C8H7N
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C8H7N
    - annotation: !!omap
      - biggr: indole_c:0
      - biocyc: META:INDOLE
      - chebi:
        - CHEBI:16881
        - CHEBI:35579
      - hmdb: HMDB00738
      - inchikey: SIKJAQJRHWYJAI-UHFFFAOYSA-N
      - kegg.compound: C00463
      - metanetx.chemical: MNXM377
      - reactome: R-ALL-216547
      - sbo: SBO:0000247
      - seed.compound: cpd00359
  - !!omap
    - id: indpyr_c
    - name: 3-(indol-3-yl)pyruvate
    - compartment: C_c
    - charge: -1.0
    - formula: C11H8NO3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C11H8NO3
    - annotation: !!omap
      - biggr: indpyr_c:-1
      - biocyc: META:INDOLE_PYRUVATE
      - chebi:
        - CHEBI:17640
      - hmdb: HMDB60484
      - inchikey: RSTKLPZEZYGQPY-UHFFFAOYSA-M
      - kegg.compound: C00331
      - metanetx.chemical: MNXM315
      - reactome: R-ALL-893599
      - sbo: SBO:0000247
      - seed.compound: cpd00278
  - !!omap
    - id: inost_c
    - name: myo-inositol
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: inost_c:0
      - biocyc:
        - META:CPD-8052
        - META:MYO-INOSITOL
      - chebi:
        - CHEBI:17268
      - hmdb:
        - HMDB00211
        - HMDB02256
        - HMDB34220
      - inchikey: CDAISMWEOUEBRE-GPIVLXJGSA-N
      - kegg.compound:
        - C00137
        - C19891
      - kegg.drug: D08079
      - metanetx.chemical: MNXM127
      - reactome:
        - R-ALL-426910
        - R-ALL-429130
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00121
        - cpd21131
  - !!omap
    - id: inost_e
    - name: myo-inositol
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: inost_e:0
      - biocyc:
        - META:CPD-8052
        - META:MYO-INOSITOL
      - chebi:
        - CHEBI:17268
      - hmdb:
        - HMDB00211
        - HMDB02256
        - HMDB34220
      - inchikey: CDAISMWEOUEBRE-GPIVLXJGSA-N
      - kegg.compound:
        - C00137
        - C19891
      - kegg.drug: D08079
      - metanetx.chemical: MNXM127
      - reactome:
        - R-ALL-426910
        - R-ALL-429130
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00121
        - cpd21131
  - !!omap
    - id: ins_c
    - name: inosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H12N4O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H12N4O5
    - annotation: !!omap
      - biggr: ins_c:0
      - biocyc: META:INOSINE
      - chebi:
        - CHEBI:17596
      - hmdb: HMDB00195
      - inchikey: UGQMRVRMYYASKQ-KQYNXXCUSA-N
      - kegg.compound: C00294
      - kegg.drug: D00054
      - metanetx.chemical: MNXM334
      - reactome:
        - R-ALL-83921
        - R-ALL-83927
      - sbo: SBO:0000247
      - seed.compound: cpd00246
  - !!omap
    - id: ipdp_c
    - name: isopentenyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C5H9O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C5H9O7P2
    - annotation: !!omap
      - biggr: ipdp_c:-3
      - biocyc: META:DELTA3-ISOPENTENYL-PP
      - chebi:
        - CHEBI:128769
      - hmdb:
        - HMDB01347
        - HMDB04196
      - inchikey: NUHSROFQTUXZQQ-UHFFFAOYSA-K
      - kegg.compound: C00129
      - lipidmaps: LMPR01010008
      - metanetx.chemical: MNXM83
      - reactome:
        - R-ALL-191362
        - R-ALL-2162256
      - sbo: SBO:0000247
      - seed.compound: cpd00113
  - !!omap
    - id: __iPKB_Clostridiaceae__istfrnA_e
    - name: Iron bound extracellular staphyloferrin A
    - compartment: C_e
    - charge: 0.0
    - formula: C17FeH24N2O14
    - notes: !!omap
      - FORMULA: C17FeH24N2O14
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__istfrnA_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__istfrnB_e
    - name: Iron bound extracellular staphyloferrin B
    - compartment: C_e
    - charge: 0.0
    - formula: C19FeH22N2O18
    - notes: !!omap
      - FORMULA: C19FeH22N2O18
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__istfrnB_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: isetac_c
    - name: isethionate
    - compartment: C_c
    - charge: -1.0
    - formula: C2H5O4S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C2H5O4S
    - annotation: !!omap
      - biggr: isetac_c:-1
      - biocyc: META:CPD-3745
      - chebi:
        - CHEBI:61904
      - hmdb: HMDB03903
      - inchikey: SUMDYPCJJOFFON-UHFFFAOYSA-M
      - kegg.compound: C05123
      - metanetx.chemical: MNXM1630
      - sbo: SBO:0000247
      - seed.compound: cpd03048
  - !!omap
    - id: isetac_e
    - name: isethionate
    - compartment: C_e
    - charge: -1.0
    - formula: C2H5O4S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C2H5O4S
    - annotation: !!omap
      - biggr: isetac_e:-1
      - biocyc: META:CPD-3745
      - chebi:
        - CHEBI:61904
      - hmdb: HMDB03903
      - inchikey: SUMDYPCJJOFFON-UHFFFAOYSA-M
      - kegg.compound: C05123
      - metanetx.chemical: MNXM1630
      - sbo: SBO:0000247
      - seed.compound: cpd03048
  - !!omap
    - id: itp_c
    - name: ITP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H11N4O14P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H11N4O14P3
    - annotation: !!omap
      - biggr: itp_c:-4
      - biocyc: META:ITP
      - chebi:
        - CHEBI:61402
      - hmdb: HMDB00189
      - inchikey: HAEJPQIATWHALX-KQYNXXCUSA-J
      - kegg.compound: C00081
      - metanetx.chemical: MNXM423
      - reactome: R-ALL-2509836
      - sbo: SBO:0000247
      - seed.compound: cpd00068
  - !!omap
    - id: k_c
    - name: potassium(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: K
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: K
    - annotation: !!omap
      - biggr: k_c:1
      - biocyc: META:K+
      - chebi:
        - CHEBI:29103
      - hmdb: HMDB00586
      - inchikey: NPYPAHLBTDXSSS-UHFFFAOYSA-N
      - kegg.compound: C00238
      - kegg.drug: D08403
      - metanetx.chemical: MNXM95
      - reactome:
        - R-ALL-29804
        - R-ALL-5626313
        - R-ALL-74126
      - sbo: SBO:0000247
      - seed.compound: cpd00205
  - !!omap
    - id: k_e
    - name: potassium(1+)
    - compartment: C_e
    - charge: 1.0
    - formula: K
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: K
    - annotation: !!omap
      - biggr: k_e:1
      - biocyc: META:K+
      - chebi:
        - CHEBI:29103
      - hmdb: HMDB00586
      - inchikey: NPYPAHLBTDXSSS-UHFFFAOYSA-N
      - kegg.compound: C00238
      - kegg.drug: D08403
      - metanetx.chemical: MNXM95
      - reactome:
        - R-ALL-29804
        - R-ALL-5626313
        - R-ALL-74126
      - sbo: SBO:0000247
      - seed.compound: cpd00205
  - !!omap
    - id: k_p
    - name: potassium(1+)
    - compartment: C_p
    - charge: 1.0
    - formula: K
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: K
    - annotation: !!omap
      - biggr: k_p:1
      - biocyc: META:K+
      - chebi:
        - CHEBI:29103
      - hmdb: HMDB00586
      - inchikey: NPYPAHLBTDXSSS-UHFFFAOYSA-N
      - kegg.compound: C00238
      - kegg.drug: D08403
      - metanetx.chemical: MNXM95
      - reactome:
        - R-ALL-29804
        - R-ALL-5626313
        - R-ALL-74126
      - sbo: SBO:0000247
      - seed.compound: cpd00205
  - !!omap
    - id: __iPKB_Clostridiaceae__lac6p_c
    - name: Lactose-6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C12H21O14P
    - notes: !!omap
      - FORMULA: C12H21O14P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__lac6p_c:0
      - biocyc: META:CPD-15973
      - chebi:
        - CHEBI:25003
        - CHEBI:28339
        - CHEBI:6354
        - CHEBI:79080
      - hmdb: HMDB06789
      - inchikey: ITPHOIFCAFNCLL-QKKXKWKRSA-L
      - kegg.compound: C05396
      - kegg.glycan: G10517
      - metanetx.chemical: MNXM2128
      - sbo: SBO:0000247
      - seed.compound: cpd03194
  - !!omap
    - id: lac__D_c
    - name: (R)-lactate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H5O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H5O3
    - annotation: !!omap
      - biggr: lac__D_c:-1
      - biocyc: META:D-LACTATE
      - chebi:
        - CHEBI:16004
      - hmdb:
        - HMDB00171
        - HMDB01311
      - inchikey: JVTAAEKCZFNVCJ-UWTATZPHSA-M
      - kegg.compound: C00256
      - metanetx.chemical: MNXM285
      - sbo: SBO:0000247
      - seed.compound: cpd00221
  - !!omap
    - id: lac__L_c
    - name: (S)-lactate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H5O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H5O3
    - annotation: !!omap
      - biggr: lac__L_c:-1
      - biocyc: META:L-LACTATE
      - chebi:
        - CHEBI:16651
      - hmdb:
        - HMDB00190
        - HMDB03328
        - HMDB62492
      - inchikey: JVTAAEKCZFNVCJ-REOHCLBHSA-M
      - kegg.compound: C00186
      - metanetx.chemical: MNXM179
      - reactome:
        - R-ALL-29708
        - R-ALL-373863
        - R-ALL-6807616
      - sbo: SBO:0000247
      - seed.compound: cpd00159
  - !!omap
    - id: lac__L_e
    - name: (S)-lactate
    - compartment: C_e
    - charge: -1.0
    - formula: C3H5O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H5O3
    - annotation: !!omap
      - biggr: lac__L_e:-1
      - biocyc: META:L-LACTATE
      - chebi:
        - CHEBI:16651
      - hmdb:
        - HMDB00190
        - HMDB03328
        - HMDB62492
      - inchikey: JVTAAEKCZFNVCJ-REOHCLBHSA-M
      - kegg.compound: C00186
      - metanetx.chemical: MNXM179
      - reactome:
        - R-ALL-29708
        - R-ALL-373863
        - R-ALL-6807616
      - sbo: SBO:0000247
      - seed.compound: cpd00159
  - !!omap
    - id: __iPKB_Clostridiaceae__lacgth_c
    - name: S-lactoyl-glutathione
    - compartment: C_c
    - charge: 0.0
    - formula: C13H21N3O8S
    - notes: !!omap
      - FORMULA: C13H21N3O8S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__lacgth_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: lald__L_c
    - name: (S)-lactaldehyde
    - compartment: C_c
    - charge: 0.0
    - formula: C3H6O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H6O2
    - annotation: !!omap
      - biggr: lald__L_c:0
      - biocyc: META:LACTALD
      - chebi:
        - CHEBI:18041
      - hmdb: HMDB03052
      - inchikey: BSABBBMNWQWLLU-VKHMYHEASA-N
      - kegg.compound:
        - C00424
        - C05999
      - metanetx.chemical: MNXM2387
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00334
        - cpd03571
        - cpd27393
  - !!omap
    - id: lcts_e
    - name: lactose
    - compartment: C_e
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: lcts_e:0
      - biocyc:
        - META:CPD-15971
        - META:CPD-15972
      - chebi:
        - CHEBI:17716
      - hmdb: HMDB41627
      - inchikey: GUBGYTABKSRVRQ-QKKXKWKRSA-N
      - kegg.compound:
        - C00243
        - C01970
      - kegg.drug: D00046
      - kegg.glycan: G10504
      - metanetx.chemical: MNXM362
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00208
        - cpd01354
        - cpd03809
  - !!omap
    - id: leu__L_c
    - name: L-leucine
    - compartment: C_c
    - charge: 0.0
    - formula: C6H13NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H13NO2
    - annotation: !!omap
      - biggr: leu__L_c:0
      - biocyc: META:LEU
      - chebi:
        - CHEBI:57427
        - CHEBI:15603
      - hmdb:
        - HMDB00687
        - HMDB62203
      - inchikey: ROHFNLRQFUQHCH-YFKPBYRVSA-N
      - kegg.compound:
        - C00123
        - C16439
      - kegg.drug: D00030
      - lipidmaps: LMFA01100048
      - metanetx.chemical: MNXM140
      - reactome:
        - R-ALL-113580
        - R-ALL-29588
        - R-ALL-351964
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00107
        - cpd15143
  - !!omap
    - id: leu__L_e
    - name: L-leucine
    - compartment: C_e
    - charge: 0.0
    - formula: C6H13NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H13NO2
    - annotation: !!omap
      - biggr: leu__L_e:0
      - biocyc: META:LEU
      - chebi:
        - CHEBI:57427
        - CHEBI:15603
      - hmdb:
        - HMDB00687
        - HMDB62203
      - inchikey: ROHFNLRQFUQHCH-YFKPBYRVSA-N
      - kegg.compound:
        - C00123
        - C16439
      - kegg.drug: D00030
      - lipidmaps: LMFA01100048
      - metanetx.chemical: MNXM140
      - reactome:
        - R-ALL-113580
        - R-ALL-29588
        - R-ALL-351964
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00107
        - cpd15143
  - !!omap
    - id: lys__L_c
    - name: L-lysinium(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: C6H15N2O2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H15N2O2
    - annotation: !!omap
      - biggr: lys__L_c:1
      - biocyc: META:LYS
      - chebi:
        - CHEBI:32551
      - hmdb:
        - HMDB00182
        - HMDB03405
        - HMDB62809
      - inchikey: KDXKERNSBIXSRK-YFKPBYRVSA-O
      - kegg.compound:
        - C00047
        - C16440
      - kegg.drug: D02304
      - metanetx.chemical: MNXM78
      - reactome:
        - R-ALL-29444
        - R-ALL-351979
        - R-ALL-351991
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00039
        - cpd19182
  - !!omap
    - id: lys__L_e
    - name: L-lysinium(1+)
    - compartment: C_e
    - charge: 1.0
    - formula: C6H15N2O2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C6H15N2O2
    - annotation: !!omap
      - biggr: lys__L_e:1
      - biocyc: META:LYS
      - chebi:
        - CHEBI:32551
      - hmdb:
        - HMDB00182
        - HMDB03405
        - HMDB62809
      - inchikey: KDXKERNSBIXSRK-YFKPBYRVSA-O
      - kegg.compound:
        - C00047
        - C16440
      - kegg.drug: D02304
      - metanetx.chemical: MNXM78
      - reactome:
        - R-ALL-29444
        - R-ALL-351979
        - R-ALL-351991
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00039
        - cpd19182
  - !!omap
    - id: __iPKB_Clostridiaceae__lysglugly_c
    - name: Lysine-glutamine-glycine tripeptide
    - compartment: C_c
    - charge: 0.0
    - formula: C13H26N4O7
    - notes: !!omap
      - FORMULA: C13H26N4O7
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__lysglugly_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__lysglugly_e
    - name: Lysine-glutamine-glycine tripeptide
    - compartment: C_e
    - charge: 0.0
    - formula: C13H26N4O7
    - notes: !!omap
      - FORMULA: C13H26N4O7
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__lysglugly_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__m2bcoa_c
    - name: 2-methylbutanoyl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C26H44N7O17P3S
    - notes: !!omap
      - CHARGE: '2.0'
      - FORMULA: C26H44N7O17P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__m2bcoa_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__madg_e
    - name: Alpha Methyl D glucoside C7H14O6
    - compartment: C_e
    - charge: 0.0
    - formula: C7H14O6
    - notes: !!omap
      - FORMULA: C7H14O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__madg_e:0
      - biocyc: META:CPD-3582
      - chebi:
        - CHEBI:320061
        - CHEBI:42974
      - inchikey: HOVAGTYPODGVJG-ZFYZTMLRSA-N
      - metanetx.chemical: MNXM724960
      - sbo: SBO:0000247
      - seed.compound: cpd15584
  - !!omap
    - id: mal__L_c
    - name: (S)-malate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H4O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H4O5
    - annotation: !!omap
      - biggr: mal__L_c:-2
      - biocyc: META:MAL
      - chebi:
        - CHEBI:15589
      - hmdb: HMDB00156
      - inchikey: BJEPYKJPYRNKOW-REOHCLBHSA-L
      - kegg.compound: C00149
      - metanetx.chemical: MNXM98
      - reactome:
        - R-ALL-113544
        - R-ALL-198498
      - sbo: SBO:0000247
      - seed.compound: cpd00130
  - !!omap
    - id: mal__L_e
    - name: (S)-malate(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: C4H4O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H4O5
    - annotation: !!omap
      - biggr: mal__L_e:-2
      - biocyc: META:MAL
      - chebi:
        - CHEBI:15589
      - hmdb: HMDB00156
      - inchikey: BJEPYKJPYRNKOW-REOHCLBHSA-L
      - kegg.compound: C00149
      - metanetx.chemical: MNXM98
      - reactome:
        - R-ALL-113544
        - R-ALL-198498
      - sbo: SBO:0000247
      - seed.compound: cpd00130
  - !!omap
    - id: mal__L_p
    - name: (S)-malate(2-)
    - compartment: C_p
    - charge: -2.0
    - formula: C4H4O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H4O5
    - annotation: !!omap
      - biggr: mal__L_p:-2
      - biocyc: META:MAL
      - chebi:
        - CHEBI:15589
      - hmdb: HMDB00156
      - inchikey: BJEPYKJPYRNKOW-REOHCLBHSA-L
      - kegg.compound: C00149
      - metanetx.chemical: MNXM98
      - reactome:
        - R-ALL-113544
        - R-ALL-198498
      - sbo: SBO:0000247
      - seed.compound: cpd00130
  - !!omap
    - id: malcoa_c
    - name: malonyl-CoA(5-)
    - compartment: C_c
    - charge: -5.0
    - formula: C24H33N7O19P3S
    - notes: !!omap
      - CHARGE: '-5'
      - FORMULA: C24H33N7O19P3S
    - annotation: !!omap
      - biggr: malcoa_c:-5
      - biocyc: META:MALONYL-COA
      - chebi:
        - CHEBI:57384
      - hmdb: HMDB01175
      - inchikey: LTYOQGRJFJAKNA-DVVLENMVSA-I
      - kegg.compound: C00083
      - lipidmaps:
        - LMFA07050031
        - LMFA07050345
      - metanetx.chemical: MNXM40
      - reactome:
        - R-ALL-2046066
        - R-ALL-29508
        - R-ALL-977323
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00070
        - cpd12270
  - !!omap
    - id: malt6p_c
    - name: alpha-maltose 6'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C12H21O14P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C12H21O14P
    - annotation: !!omap
      - biggr: malt6p_c:-2
      - biocyc:
        - META:CPD-1244
        - META:CPD-15982
      - chebi:
        - CHEBI:57478
      - inchikey: ITPHOIFCAFNCLL-ASMJPISFSA-L
      - kegg.compound: C02995
      - kegg.glycan: G10519
      - metanetx.chemical: MNXM2394
      - sbo: SBO:0000247
      - seed.compound: cpd01919
  - !!omap
    - id: malt_c
    - name: maltose
    - compartment: C_c
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: malt_c:0
      - biocyc:
        - META:ALPHA-MALTOSE
        - META:MALTOSE
      - chebi:
        - CHEBI:17306
      - inchikey: GUBGYTABKSRVRQ-PICCSMPSSA-N
      - kegg.compound:
        - C00208
        - C00897
      - kegg.drug: D00044
      - kegg.glycan: G00275
      - metanetx.chemical: MNXM165
      - reactome:
        - R-ALL-188986
        - R-ALL-868706
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00179
        - cpd00665
  - !!omap
    - id: malt_e
    - name: maltose
    - compartment: C_e
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: malt_e:0
      - biocyc:
        - META:ALPHA-MALTOSE
        - META:MALTOSE
      - chebi:
        - CHEBI:17306
      - inchikey: GUBGYTABKSRVRQ-PICCSMPSSA-N
      - kegg.compound:
        - C00208
        - C00897
      - kegg.drug: D00044
      - kegg.glycan: G00275
      - metanetx.chemical: MNXM165
      - reactome:
        - R-ALL-188986
        - R-ALL-868706
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00179
        - cpd00665
  - !!omap
    - id: malthp_c
    - name: alpha-maltoheptaose
    - compartment: C_c
    - charge: 0.0
    - formula: C42H72O36
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C42H72O36
    - annotation: !!omap
      - biggr: malthp_c:0
      - biocyc: META:CPD0-1133
      - chebi:
        - CHEBI:61954
      - hmdb: HMDB13000
      - inchikey: ZHZITDGOAFCURV-VVTKTIMZSA-N
      - kegg.glycan: G00689
      - metanetx.chemical: MNXM61025
      - sbo: SBO:0000247
      - seed.compound: cpd15494
  - !!omap
    - id: malthp_e
    - name: alpha-maltoheptaose
    - compartment: C_e
    - charge: 0.0
    - formula: C42H72O36
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C42H72O36
    - annotation: !!omap
      - biggr: malthp_e:0
      - biocyc: META:CPD0-1133
      - chebi:
        - CHEBI:61954
      - hmdb: HMDB13000
      - inchikey: ZHZITDGOAFCURV-VVTKTIMZSA-N
      - kegg.glycan: G00689
      - metanetx.chemical: MNXM61025
      - sbo: SBO:0000247
      - seed.compound: cpd15494
  - !!omap
    - id: malthx_c
    - name: alpha-maltohexaose
    - compartment: C_c
    - charge: 0.0
    - formula: C36H62O31
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C36H62O31
    - annotation: !!omap
      - biggr: malthx_c:0
      - biocyc: META:MALTOHEXAOSE
      - chebi:
        - CHEBI:61953
      - hmdb: HMDB12253
      - inchikey: OCIBBXPLUVYKCH-QXVNYKTNSA-N
      - kegg.compound: C01936
      - kegg.glycan: G00755
      - metanetx.chemical: MNXM1317
      - sbo: SBO:0000247
      - seed.compound: cpd01329
  - !!omap
    - id: malthx_e
    - name: alpha-maltohexaose
    - compartment: C_e
    - charge: 0.0
    - formula: C36H62O31
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C36H62O31
    - annotation: !!omap
      - biggr: malthx_e:0
      - biocyc: META:MALTOHEXAOSE
      - chebi:
        - CHEBI:61953
      - hmdb: HMDB12253
      - inchikey: OCIBBXPLUVYKCH-QXVNYKTNSA-N
      - kegg.compound: C01936
      - kegg.glycan: G00755
      - metanetx.chemical: MNXM1317
      - sbo: SBO:0000247
      - seed.compound: cpd01329
  - !!omap
    - id: maltpt_c
    - name: alpha-maltopentaose
    - compartment: C_c
    - charge: 0.0
    - formula: C30H52O26
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C30H52O26
    - annotation: !!omap
      - biggr: maltpt_c:0
      - biocyc: META:MALTOPENTAOSE
      - chebi:
        - CHEBI:61952
      - hmdb: HMDB12254
      - inchikey: FTNIPWXXIGNQQF-DWTFCAFKSA-N
      - kegg.glycan: G00343
      - metanetx.chemical: MNXM1538
      - sbo: SBO:0000247
      - seed.compound: cpd15495
  - !!omap
    - id: malttr_c
    - name: alpha-maltotriose
    - compartment: C_c
    - charge: 0.0
    - formula: C18H32O16
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C18H32O16
    - annotation: !!omap
      - biggr: malttr_c:0
      - biocyc: META:MALTOTRIOSE
      - chebi:
        - CHEBI:27931
      - hmdb: HMDB01262
      - inchikey: FYGDTMLNYKFZSV-PXXRMHSHSA-N
      - kegg.compound: C01835
      - metanetx.chemical: MNXM468
      - reactome: R-ALL-191103
      - sbo: SBO:0000247
      - seed.compound: cpd01262
  - !!omap
    - id: malttr_e
    - name: alpha-maltotriose
    - compartment: C_e
    - charge: 0.0
    - formula: C18H32O16
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C18H32O16
    - annotation: !!omap
      - biggr: malttr_e:0
      - biocyc: META:MALTOTRIOSE
      - chebi:
        - CHEBI:27931
      - hmdb: HMDB01262
      - inchikey: FYGDTMLNYKFZSV-PXXRMHSHSA-N
      - kegg.compound: C01835
      - metanetx.chemical: MNXM468
      - reactome: R-ALL-191103
      - sbo: SBO:0000247
      - seed.compound: cpd01262
  - !!omap
    - id: maltttr_c
    - name: alpha-maltotetraose
    - compartment: C_c
    - charge: 0.0
    - formula: C24H42O21
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C24H42O21
    - annotation: !!omap
      - biggr: maltttr_c:0
      - biocyc:
        - META:CPD-13205
        - META:CPD0-2595
        - META:MALTOTETRAOSE
      - chebi:
        - CHEBI:61988
      - hmdb: HMDB01296
      - inchikey: LUEWUZLMQUOBSB-ZLBHSGTGSA-N
      - kegg.compound:
        - C02013
        - C02052
      - kegg.glycan: G00459
      - metanetx.chemical: MNXM5663
      - sbo: SBO:0000247
      - seed.compound:
        - cpd01376
        - cpd01399
  - !!omap
    - id: __iPKB_Clostridiaceae__man1p_c
    - name: D-Mannose 1-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__man1p_c:0
      - biocyc: META:MANNOSE-1P
      - chebi:
        - CHEBI:10261
        - CHEBI:12327
        - CHEBI:18205
        - CHEBI:21058
        - CHEBI:22404
        - CHEBI:35374
        - CHEBI:4210
        - CHEBI:43854
        - CHEBI:58409
      - hmdb:
        - HMDB01436
        - HMDB06330
      - inchikey: HXXFSFRBOHSIMQ-RWOPYEJCSA-L
      - kegg.compound: C00636
      - metanetx.chemical: MNXM721
      - reactome: R-ALL-532531
      - sbo: SBO:0000247
      - seed.compound: cpd00485
  - !!omap
    - id: __iPKB_Clostridiaceae__man6p_c
    - name: D-Mannose 6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__man6p_c:0
      - biocyc:
        - META:CPD-15979
        - META:CPD-15980
        - META:Mannose-6-phosphate
      - chebi:
        - CHEBI:13000
        - CHEBI:17369
        - CHEBI:4211
        - CHEBI:48042
        - CHEBI:48066
        - CHEBI:58735
      - inchikey: NBSCHQHZLSJFNQ-QTVWNMPRSA-L
      - kegg.compound: C00275
      - metanetx.chemical: MNXM427
      - reactome: R-ALL-532562
      - sbo: SBO:0000247
      - seed.compound: cpd00235
  - !!omap
    - id: __iPKB_Clostridiaceae__man6pglyc_c
    - name: 2(alpha-D-Mannosyl-6-phosphate)-D-glycerate
    - compartment: C_c
    - charge: 0.0
    - formula: C9H14O12P
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C9H14O12P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__man6pglyc_c:0
      - biocyc: META:CPD0-1063
      - chebi:
        - CHEBI:60331
        - CHEBI:61001
      - hmdb: HMDB12152
      - inchikey: BOLXAGHGKNGVBE-MTXRGOKVSA-K
      - kegg.compound: C16699
      - metanetx.chemical: MNXM3470
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15496
        - cpd16506
  - !!omap
    - id: man_c
    - name: D-mannopyranose
    - compartment: C_c
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: man_c:0
      - biocyc: META:D-mannopyranose
      - chebi:
        - CHEBI:4208
      - hmdb: HMDB00169
      - inchikey: WQZGKKKJIJFFOK-QTVWNMPRSA-N
      - kegg.compound: C00159
      - metanetx.chemical: MNXM182
      - reactome:
        - R-ALL-429579
        - R-ALL-6799594
        - R-ALL-964752
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00138
        - cpd27437
  - !!omap
    - id: man_e
    - name: D-mannopyranose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: man_e:0
      - biocyc: META:D-mannopyranose
      - chebi:
        - CHEBI:4208
      - hmdb: HMDB00169
      - inchikey: WQZGKKKJIJFFOK-QTVWNMPRSA-N
      - kegg.compound: C00159
      - metanetx.chemical: MNXM182
      - reactome:
        - R-ALL-429579
        - R-ALL-6799594
        - R-ALL-964752
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00138
        - cpd27437
  - !!omap
    - id: manglyc_e
    - name: 2-(alpha-D-mannosyl)-D-glycerate
    - compartment: C_e
    - charge: -1.0
    - formula: C9H15O9
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C9H15O9
    - annotation: !!omap
      - biggr: manglyc_e:-1
      - biocyc: META:2-O-ALPHA-MANNOSYL-D-GLYCERATE
      - chebi:
        - CHEBI:57541
      - inchikey: DDXCFDOPXBPUJC-SAYMMRJXSA-M
      - kegg.compound: C11544
      - metanetx.chemical: MNXM1624
      - sbo: SBO:0000247
      - seed.compound: cpd08374
  - !!omap
    - id: manglyc_p
    - name: 2-(alpha-D-mannosyl)-D-glycerate
    - compartment: C_p
    - charge: -1.0
    - formula: C9H15O9
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C9H15O9
    - annotation: !!omap
      - biggr: manglyc_p:-1
      - biocyc: META:2-O-ALPHA-MANNOSYL-D-GLYCERATE
      - chebi:
        - CHEBI:57541
      - inchikey: DDXCFDOPXBPUJC-SAYMMRJXSA-M
      - kegg.compound: C11544
      - metanetx.chemical: MNXM1624
      - sbo: SBO:0000247
      - seed.compound: cpd08374
  - !!omap
    - id: __iPKB_Clostridiaceae__mbdg_e
    - name: Beta Methylglucoside C7H14O6
    - compartment: C_e
    - charge: 0.0
    - formula: C7H14O6
    - notes: !!omap
      - FORMULA: C7H14O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__mbdg_e:0
      - metanetx.chemical: MNXM10816
      - sbo: SBO:0000247
      - seed.compound: cpd15585
  - !!omap
    - id: __iPKB_Clostridiaceae__mcbtt_e
    - name: Mycobactin T
    - compartment: C_e
    - charge: 0.0
    - formula: C47H77N5O10
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C47H77N5O10
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__mcbtt_e:0
      - biocyc: META:CPD-12068
      - inchikey: WTCKJYQWPPSOES-UHFFFAOYSA-N
      - metanetx.chemical: MNXM62700
      - sbo: SBO:0000247
      - seed.compound: cpd15972
  - !!omap
    - id: mdhdhf_c
    - name: (2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
    - compartment: C_c
    - charge: 0.0
    - formula: C5H8O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H8O4
    - annotation: !!omap
      - biggr: mdhdhf_c:0
      - biocyc: META:CPD-10773
      - chebi:
        - CHEBI:71316
      - inchikey: CCVJVKWZZMMBHB-WVZVXSGGSA-N
      - metanetx.chemical: MNXM9407
      - sbo: SBO:0000247
      - seed.compound: cpd22811
  - !!omap
    - id: melib_c
    - name: melibiose
    - compartment: C_c
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: melib_c:0
      - biocyc: META:MELIBIOSE
      - chebi:
        - CHEBI:28053
      - inchikey: DLRVVLDZNNYCBX-ZZFZYMBESA-N
      - kegg.glycan: G00835
      - metanetx.chemical: MNXM8340
      - sbo: SBO:0000247
  - !!omap
    - id: meoh_c
    - name: methanol
    - compartment: C_c
    - charge: 0.0
    - formula: CH4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4O
    - annotation: !!omap
      - biggr: meoh_c:0
      - biocyc:
        - META:ALCOHOL-GROUP
        - META:METOH
      - chebi:
        - CHEBI:17790
      - hmdb: HMDB01875
      - inchikey: OKKJLVBELUTLKV-UHFFFAOYSA-N
      - kegg.compound: C00132
      - kegg.drug: D02309
      - metanetx.chemical: MNXM157
      - reactome:
        - R-ALL-5359061
        - R-ALL-5693711
      - sbo: SBO:0000247
      - seed.compound: cpd00116
  - !!omap
    - id: meoh_e
    - name: methanol
    - compartment: C_e
    - charge: 0.0
    - formula: CH4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4O
    - annotation: !!omap
      - biggr: meoh_e:0
      - biocyc:
        - META:ALCOHOL-GROUP
        - META:METOH
      - chebi:
        - CHEBI:17790
      - hmdb: HMDB01875
      - inchikey: OKKJLVBELUTLKV-UHFFFAOYSA-N
      - kegg.compound: C00132
      - kegg.drug: D02309
      - metanetx.chemical: MNXM157
      - reactome:
        - R-ALL-5359061
        - R-ALL-5693711
      - sbo: SBO:0000247
      - seed.compound: cpd00116
  - !!omap
    - id: meoh_p
    - name: methanol
    - compartment: C_p
    - charge: 0.0
    - formula: CH4O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4O
    - annotation: !!omap
      - biggr: meoh_p:0
      - biocyc:
        - META:ALCOHOL-GROUP
        - META:METOH
      - chebi:
        - CHEBI:17790
      - hmdb: HMDB01875
      - inchikey: OKKJLVBELUTLKV-UHFFFAOYSA-N
      - kegg.compound: C00132
      - kegg.drug: D02309
      - metanetx.chemical: MNXM157
      - reactome:
        - R-ALL-5359061
        - R-ALL-5693711
      - sbo: SBO:0000247
      - seed.compound: cpd00116
  - !!omap
    - id: __iPKB_Clostridiaceae__met_L_ala__L_c
    - name: Met L ala L C8H16N2O3S
    - compartment: C_c
    - charge: 0.0
    - formula: C8H15N2O3S
    - notes: !!omap
      - FORMULA: C8H15N2O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__met_L_ala__L_c:0
      - metanetx.chemical: MNXM8868
      - sbo: SBO:0000247
      - seed.compound: cpd11590
  - !!omap
    - id: __iPKB_Clostridiaceae__met_L_ala__L_e
    - name: Met L ala L C8H16N2O3S
    - compartment: C_e
    - charge: 0.0
    - formula: C8H15N2O3S
    - notes: !!omap
      - FORMULA: C8H15N2O3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__met_L_ala__L_e:0
      - metanetx.chemical: MNXM8868
      - sbo: SBO:0000247
      - seed.compound: cpd11590
  - !!omap
    - id: met__D_c
    - name: D-methionine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2S
    - annotation: !!omap
      - biggr: met__D_c:0
      - biocyc: META:CPD-218
      - chebi:
        - CHEBI:57932
        - CHEBI:16867
      - inchikey: FFEARJCKVFRZRR-SCSAIBSYSA-N
      - kegg.compound: C00855
      - metanetx.chemical: MNXM1275
      - sbo: SBO:0000247
      - seed.compound: cpd00637
  - !!omap
    - id: met__D_e
    - name: D-methionine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2S
    - annotation: !!omap
      - biggr: met__D_e:0
      - biocyc: META:CPD-218
      - chebi:
        - CHEBI:57932
        - CHEBI:16867
      - inchikey: FFEARJCKVFRZRR-SCSAIBSYSA-N
      - kegg.compound: C00855
      - metanetx.chemical: MNXM1275
      - sbo: SBO:0000247
      - seed.compound: cpd00637
  - !!omap
    - id: met__L_c
    - name: L-methionine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2S
    - annotation: !!omap
      - biggr: met__L_c:0
      - biocyc: META:MET
      - chebi:
        - CHEBI:57844
        - CHEBI:16643
      - hmdb:
        - HMDB00696
        - HMDB33951
      - inchikey: FFEARJCKVFRZRR-BYPYZUCNSA-N
      - kegg.compound:
        - C00073
        - C01733
      - kegg.drug:
        - D00019
        - D04983
        - D04984
      - metanetx.chemical: MNXM61
      - reactome:
        - R-ALL-1130765
        - R-ALL-174390
        - R-ALL-379705
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00060
        - cpd30746
  - !!omap
    - id: met__L_e
    - name: L-methionine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO2S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2S
    - annotation: !!omap
      - biggr: met__L_e:0
      - biocyc: META:MET
      - chebi:
        - CHEBI:57844
        - CHEBI:16643
      - hmdb:
        - HMDB00696
        - HMDB33951
      - inchikey: FFEARJCKVFRZRR-BYPYZUCNSA-N
      - kegg.compound:
        - C00073
        - C01733
      - kegg.drug:
        - D00019
        - D04983
        - D04984
      - metanetx.chemical: MNXM61
      - reactome:
        - R-ALL-1130765
        - R-ALL-174390
        - R-ALL-379705
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00060
        - cpd30746
  - !!omap
    - id: methf_c
    - name: (6R)-5,10-methenyltetrahydrofolate
    - compartment: C_c
    - charge: -1.0
    - formula: C20H20N7O6
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C20H20N7O6
    - annotation: !!omap
      - biggr: methf_c:-1
      - biocyc: META:5-10-METHENYL-THF
      - chebi:
        - CHEBI:57455
      - hmdb:
        - HMDB01354
        - HMDB62623
      - inchikey: MEANFMOQMXYMCT-OLZOCXBDSA-M
      - kegg.compound: C00445
      - metanetx.chemical: MNXM511
      - reactome: R-ALL-6801458
      - sbo: SBO:0000247
      - seed.compound: cpd00347
  - !!omap
    - id: metox_c
    - name: L-methionine S-oxide
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO3S
    - notes: !!omap
      - FORMULA: C5H11NO3S
    - annotation: !!omap
      - biggr: metox_c:0
      - biocyc: META:L-Methionine-sulfoxides
      - chebi:
        - CHEBI:17016
      - inchikey: QEFRNWWLZKMPFJ-YGVKFDHGSA-N
      - kegg.compound: C02989
      - metanetx.chemical: MNXM2246
      - reactome: R-ALL-5676943
      - sbo: SBO:0000247
      - seed.compound:
        - cpd01914
        - cpd15498
        - cpd29319
  - !!omap
    - id: metox_e
    - name: L-methionine S-oxide
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO3S
    - notes: !!omap
      - FORMULA: C5H11NO3S
    - annotation: !!omap
      - biggr: metox_e:0
      - biocyc: META:L-Methionine-sulfoxides
      - chebi:
        - CHEBI:17016
      - inchikey: QEFRNWWLZKMPFJ-YGVKFDHGSA-N
      - kegg.compound: C02989
      - metanetx.chemical: MNXM2246
      - reactome: R-ALL-5676943
      - sbo: SBO:0000247
      - seed.compound:
        - cpd01914
        - cpd15498
        - cpd29319
  - !!omap
    - id: metsox_R__L_c
    - name: L-methionine (R)-S-oxide zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_R__L_c:0
      - biocyc: META:CPD-8990
      - chebi:
        - CHEBI:58773
        - CHEBI:49032
      - inchikey: QEFRNWWLZKMPFJ-ZXPFJRLXSA-N
      - kegg.compound: C15998
      - metanetx.chemical: MNXM2245
      - sbo: SBO:0000247
      - seed.compound:
        - cpd14720
        - cpd15497
  - !!omap
    - id: metsox_R__L_e
    - name: L-methionine (R)-S-oxide zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_R__L_e:0
      - biocyc: META:CPD-8990
      - chebi:
        - CHEBI:58773
        - CHEBI:49032
      - inchikey: QEFRNWWLZKMPFJ-ZXPFJRLXSA-N
      - kegg.compound: C15998
      - metanetx.chemical: MNXM2245
      - sbo: SBO:0000247
      - seed.compound:
        - cpd14720
        - cpd15497
  - !!omap
    - id: metsox_S__L_c
    - name: L-methionine (S)-S-oxide
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_S__L_c:0
      - biocyc: META:L-Methionine-sulfoxides
      - chebi:
        - CHEBI:58772
        - CHEBI:49031
      - inchikey: QEFRNWWLZKMPFJ-YGVKFDHGSA-N
      - kegg.compound: C02989
      - metanetx.chemical: MNXM2246
      - reactome: R-ALL-5676943
      - sbo: SBO:0000247
      - seed.compound:
        - cpd01914
        - cpd15498
        - cpd29319
  - !!omap
    - id: metsox_S__L_e
    - name: L-methionine (S)-S-oxide
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO3S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO3S
    - annotation: !!omap
      - biggr: metsox_S__L_e:0
      - biocyc: META:L-Methionine-sulfoxides
      - chebi:
        - CHEBI:58772
        - CHEBI:49031
      - inchikey: QEFRNWWLZKMPFJ-YGVKFDHGSA-N
      - kegg.compound: C02989
      - metanetx.chemical: MNXM2246
      - reactome: R-ALL-5676943
      - sbo: SBO:0000247
      - seed.compound:
        - cpd01914
        - cpd15498
        - cpd29319
  - !!omap
    - id: mg2_c
    - name: magnesium(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Mg
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Mg
    - annotation: !!omap
      - biggr: mg2_c:2
      - biocyc: META:MG+2
      - chebi:
        - CHEBI:18420
      - hmdb: HMDB00547
      - inchikey: JLVVSXFLKOJNIY-UHFFFAOYSA-N
      - kegg.compound: C00305
      - metanetx.chemical: MNXM653
      - reactome:
        - R-ALL-109496
        - R-ALL-114632
        - R-ALL-29926
        - R-ALL-5336432
      - sbo: SBO:0000247
      - seed.compound: cpd00254
  - !!omap
    - id: mg2_e
    - name: magnesium(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Mg
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Mg
    - annotation: !!omap
      - biggr: mg2_e:2
      - biocyc: META:MG+2
      - chebi:
        - CHEBI:18420
      - hmdb: HMDB00547
      - inchikey: JLVVSXFLKOJNIY-UHFFFAOYSA-N
      - kegg.compound: C00305
      - metanetx.chemical: MNXM653
      - reactome:
        - R-ALL-109496
        - R-ALL-114632
        - R-ALL-29926
        - R-ALL-5336432
      - sbo: SBO:0000247
      - seed.compound: cpd00254
  - !!omap
    - id: mg2_p
    - name: magnesium(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Mg
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Mg
    - annotation: !!omap
      - biggr: mg2_p:2
      - biocyc: META:MG+2
      - chebi:
        - CHEBI:18420
      - hmdb: HMDB00547
      - inchikey: JLVVSXFLKOJNIY-UHFFFAOYSA-N
      - kegg.compound: C00305
      - metanetx.chemical: MNXM653
      - reactome:
        - R-ALL-109496
        - R-ALL-114632
        - R-ALL-29926
        - R-ALL-5336432
      - sbo: SBO:0000247
      - seed.compound: cpd00254
  - !!omap
    - id: __iPKB_Clostridiaceae__mhpglu_c
    - name: 5 Methyltetrahydropteroyltri L glutamate C25H36N8O12
    - compartment: C_c
    - charge: 0.0
    - formula: C30H35N9O12
    - notes: !!omap
      - FORMULA: C30H35N9O12
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__mhpglu_c:0
      - biocyc: META:CPD-1302
      - chebi:
        - CHEBI:12147
        - CHEBI:17614
        - CHEBI:20613
        - CHEBI:2099
        - CHEBI:58207
      - hmdb: HMDB12177
      - inchikey: HVRNKDVLFAVCJF-VJANTYMQSA-J
      - kegg.compound: C04489
      - metanetx.chemical: MNXM2623
      - sbo: SBO:0000247
      - seed.compound: cpd02738
  - !!omap
    - id: mi1p__D_c
    - name: 1D-myo-inositol 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: mi1p__D_c:-2
      - biocyc: META:D-MYO-INOSITOL-1-MONOPHOSPHATE
      - chebi:
        - CHEBI:58433
      - inchikey: INAPMGSXUVUWAF-UOTPTPDRSA-L
      - kegg.compound: C01177
      - metanetx.chemical: MNXM646
      - reactome: R-ALL-870330
      - sbo: SBO:0000247
      - seed.compound: cpd00867
  - !!omap
    - id: mlthf_c
    - name: (6R)-5,10-methylenetetrahydrofolate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C20H21N7O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C20H21N7O6
    - annotation: !!omap
      - biggr: mlthf_c:-2
      - biocyc: META:METHYLENE-THF
      - chebi:
        - CHEBI:15636
      - inchikey: QYNUQALWYRSVHF-OLZOCXBDSA-L
      - kegg.compound: C00143
      - metanetx.chemical: MNXM183
      - sbo: SBO:0000247
  - !!omap
    - id: mn2_c
    - name: manganese(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Mn
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Mn
    - annotation: !!omap
      - biggr: mn2_c:2
      - biocyc: META:MN+2
      - chebi:
        - CHEBI:29035
      - hmdb: HMDB01333
      - inchikey: WAEMQWOKJMHJLA-UHFFFAOYSA-N
      - kegg.compound: C19610
      - metanetx.chemical: MNXM2255
      - reactome:
        - R-ALL-1981162
        - R-ALL-29418
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00030
        - cpd20863
  - !!omap
    - id: mn2_e
    - name: manganese(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Mn
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Mn
    - annotation: !!omap
      - biggr: mn2_e:2
      - biocyc: META:MN+2
      - chebi:
        - CHEBI:29035
      - hmdb: HMDB01333
      - inchikey: WAEMQWOKJMHJLA-UHFFFAOYSA-N
      - kegg.compound: C19610
      - metanetx.chemical: MNXM2255
      - reactome:
        - R-ALL-1981162
        - R-ALL-29418
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00030
        - cpd20863
  - !!omap
    - id: mn2_p
    - name: manganese(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Mn
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Mn
    - annotation: !!omap
      - biggr: mn2_p:2
      - biocyc: META:MN+2
      - chebi:
        - CHEBI:29035
      - hmdb: HMDB01333
      - inchikey: WAEMQWOKJMHJLA-UHFFFAOYSA-N
      - kegg.compound: C19610
      - metanetx.chemical: MNXM2255
      - reactome:
        - R-ALL-1981162
        - R-ALL-29418
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00030
        - cpd20863
  - !!omap
    - id: mnl1p_c
    - name: D-mannitol 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C6H13O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C6H13O9P
    - annotation: !!omap
      - biggr: mnl1p_c:-2
      - biocyc: META:MANNITOL-1P
      - chebi:
        - CHEBI:61381
      - hmdb: HMDB01530
      - inchikey: GACTWZZMVMUKNG-KVTDHHQDSA-L
      - kegg.compound: C00644
      - metanetx.chemical: MNXM90126
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00491
        - cpd27436
  - !!omap
    - id: mnl_e
    - name: D-mannitol
    - compartment: C_e
    - charge: 0.0
    - formula: C6H14O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H14O6
    - annotation: !!omap
      - biggr: mnl_e:0
      - biocyc: META:MANNITOL
      - chebi:
        - CHEBI:16899
      - hmdb:
        - HMDB00765
        - HMDB01363
      - inchikey: FBPFZTCFMRRESA-KVTDHHQDSA-N
      - kegg.compound: C00392
      - kegg.drug: D00062
      - metanetx.chemical: MNXM615
      - sbo: SBO:0000247
      - seed.compound: cpd00314
  - !!omap
    - id: mnl_p
    - name: D-mannitol
    - compartment: C_p
    - charge: 0.0
    - formula: C6H14O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H14O6
    - annotation: !!omap
      - biggr: mnl_p:0
      - biocyc: META:MANNITOL
      - chebi:
        - CHEBI:16899
      - hmdb:
        - HMDB00765
        - HMDB01363
      - inchikey: FBPFZTCFMRRESA-KVTDHHQDSA-N
      - kegg.compound: C00392
      - kegg.drug: D00062
      - metanetx.chemical: MNXM615
      - sbo: SBO:0000247
      - seed.compound: cpd00314
  - !!omap
    - id: mql8_c
    - name: menaquinol-8
    - compartment: C_c
    - charge: 0.0
    - formula: C51H74O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C51H74O2
    - annotation: !!omap
      - biggr: mql8_c:0
      - biocyc: META:REDUCED-MENAQUINONE
      - chebi:
        - CHEBI:61684
      - inchikey: OIEZRVBFVPGODT-WQWYCSGDSA-N
      - metanetx.chemical: MNXM223
      - sbo: SBO:0000247
      - seed.compound: cpd15499
  - !!omap
    - id: mqn8_c
    - name: menaquinone-8
    - compartment: C_c
    - charge: 0.0
    - formula: C51H72O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C51H72O2
    - annotation: !!omap
      - biggr: mqn8_c:0
      - biocyc: META:CPD-9728
      - chebi:
        - CHEBI:44027
      - inchikey: LXKDFTDVRVLXFY-WQWYCSGDSA-N
      - metanetx.chemical: MNXM509
      - sbo: SBO:0000247
      - seed.compound: cpd15500
  - !!omap
    - id: msa_c
    - name: 3-oxopropanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H3O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H3O3
    - annotation: !!omap
      - biggr: msa_c:-1
      - biocyc: META:MALONATE-S-ALD
      - chebi:
        - CHEBI:33190
      - hmdb:
        - HMDB11111
        - HMDB11666
      - inchikey: OAKURXIZZOAYBC-UHFFFAOYSA-M
      - kegg.compound: C00222
      - metanetx.chemical: MNXM244
      - reactome: R-ALL-909783
      - sbo: SBO:0000247
      - seed.compound: cpd00191
  - !!omap
    - id: mso3_c
    - name: methanesulfonate
    - compartment: C_c
    - charge: -1.0
    - formula: CH3O3S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: CH3O3S
    - annotation: !!omap
      - biggr: mso3_c:-1
      - biocyc: META:CPD-3746
      - chebi:
        - CHEBI:25224
      - inchikey: AFVFQIVMOAPDHO-UHFFFAOYSA-M
      - kegg.compound: C11145
      - metanetx.chemical: MNXM1485
      - sbo: SBO:0000247
      - seed.compound: cpd08023
  - !!omap
    - id: mso3_e
    - name: methanesulfonate
    - compartment: C_e
    - charge: -1.0
    - formula: CH3O3S
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: CH3O3S
    - annotation: !!omap
      - biggr: mso3_e:-1
      - biocyc: META:CPD-3746
      - chebi:
        - CHEBI:25224
      - inchikey: AFVFQIVMOAPDHO-UHFFFAOYSA-M
      - kegg.compound: C11145
      - metanetx.chemical: MNXM1485
      - sbo: SBO:0000247
      - seed.compound: cpd08023
  - !!omap
    - id: mthgxl_c
    - name: methylglyoxal
    - compartment: C_c
    - charge: 0.0
    - formula: C3H4O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H4O2
    - annotation: !!omap
      - biggr: mthgxl_c:0
      - biocyc: META:METHYL-GLYOXAL
      - chebi:
        - CHEBI:17158
      - hmdb: HMDB01167
      - inchikey: AIJULSRZWUXGPQ-UHFFFAOYSA-N
      - kegg.compound: C00546
      - metanetx.chemical: MNXM310
      - reactome: R-ALL-5694074
      - sbo: SBO:0000247
      - seed.compound: cpd00428
  - !!omap
    - id: mththf_c
    - name: (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: mththf_c:0
      - biocyc: META:CPD-10774
      - chebi:
        - CHEBI:44800
      - inchikey: BVIYGXUQVXBHQS-IUYQGCFVSA-N
      - kegg.compound: C21382
      - metanetx.chemical: MNXM30887
      - sbo: SBO:0000247
  - !!omap
    - id: mththf_e
    - name: (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: mththf_e:0
      - biocyc: META:CPD-10774
      - chebi:
        - CHEBI:44800
      - inchikey: BVIYGXUQVXBHQS-IUYQGCFVSA-N
      - kegg.compound: C21382
      - metanetx.chemical: MNXM30887
      - sbo: SBO:0000247
  - !!omap
    - id: mththf_p
    - name: (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol
    - compartment: C_p
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: mththf_p:0
      - biocyc: META:CPD-10774
      - chebi:
        - CHEBI:44800
      - inchikey: BVIYGXUQVXBHQS-IUYQGCFVSA-N
      - kegg.compound: C21382
      - metanetx.chemical: MNXM30887
      - sbo: SBO:0000247
  - !!omap
    - id: murein4p3p_p
    - name: Two linked disacharide tetrapeptide and tripeptide murein units 
        (uncrosslinked, middle of chain)
    - compartment: C_p
    - charge: -4.0
    - formula: C71H109N13O39
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C71H109N13O39
    - annotation: !!omap
      - biggr: murein4p3p_p:-4
      - inchikey: AKLORNSFZCNZDU-UHFFFAOYSA-H
      - metanetx.chemical: MNXM88346
      - sbo: SBO:0000247
      - seed.compound: cpd15504
  - !!omap
    - id: murein4p4p_p
    - name: Two linked disacharide tetrapeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: C_p
    - charge: -4.0
    - formula: C74H114N14O40
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C74H114N14O40
    - annotation: !!omap
      - biggr: murein4p4p_p:-4
      - biocyc: META:CPD0-2269
      - inchikey: VTZDBMVDVOTCFD-UHFFFAOYSA-G
      - metanetx.chemical: MNXM88347
      - sbo: SBO:0000247
      - seed.compound: cpd15505
  - !!omap
    - id: murein4px4p4p_p
    - name: three disacharide linked murein units (tetrapeptide crosslinked 
        tetrapeptide (A2pm->D-ala), one uncrosslinked tetrapaptide) (middle of 
        chain)
    - compartment: C_p
    - charge: -6.0
    - formula: C111H169N21O59
    - notes: !!omap
      - CHARGE: '-6'
      - FORMULA: C111H169N21O59
    - annotation: !!omap
      - biggr: murein4px4p4p_p:-6
      - biocyc: META:CPD0-2266
      - inchikey: NPJMJVATSCHTAI-UHFFFAOYSA-F
      - metanetx.chemical: MNXM87122
      - sbo: SBO:0000247
      - seed.compound: cpd15507
  - !!omap
    - id: __iPKB_Clostridiaceae__murein4px4p_p
    - name: Two disacharide linked murein units, tetrapeptide corsslinked 
        tetrapeptide (A2pm->D-ala) (middle of chain)
    - compartment: C_p
    - charge: 0.0
    - formula: C74H112N14O39
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C74H112N14O39
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__murein4px4p_p:0
      - metanetx.chemical: MNXM5316
      - sbo: SBO:0000247
      - seed.compound: cpd15506
  - !!omap
    - id: murein4px4px4p_p
    - name: Three disacharide linked murein units (tetrapeptide crosslinked 
        tetrapeptide (A2pm->D-ala) & tetrapeptide corsslinked tetrapeptide 
        (A2pm->D-ala)) (middle of chain)
    - compartment: C_p
    - charge: -6.0
    - formula: C111H167N21O58
    - notes: !!omap
      - CHARGE: '-6'
      - FORMULA: C111H167N21O58
    - annotation: !!omap
      - biggr: murein4px4px4p_p:-6
      - metanetx.chemical: MNXM6451
      - sbo: SBO:0000247
      - seed.compound: cpd15508
  - !!omap
    - id: murein5p3p_p
    - name: Two linked disacharide pentapeptide and tripeptide murein units 
        (uncrosslinked, middle of chain)
    - compartment: C_p
    - charge: -4.0
    - formula: C74H114N14O40
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C74H114N14O40
    - annotation: !!omap
      - biggr: murein5p3p_p:-4
      - inchikey: SBOXLYQXPDGZLN-UHFFFAOYSA-G
      - metanetx.chemical: MNXM5972
      - sbo: SBO:0000247
      - seed.compound: cpd15509
  - !!omap
    - id: murein5p4p_p
    - name: Two linked disacharide pentapeptide and tetrapeptide murein units 
        (uncrosslinked, middle of chain)
    - compartment: C_p
    - charge: -4.0
    - formula: C77H119N15O41
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C77H119N15O41
    - annotation: !!omap
      - biggr: murein5p4p_p:-4
      - inchikey: YJNGRCZHKAYCMA-VZNOAHCOSA-E
      - metanetx.chemical: MNXM5971
      - sbo: SBO:0000247
      - seed.compound: cpd15510
  - !!omap
    - id: murein5p5p5p_p
    - name: Three linked disacharide pentapeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: C_p
    - charge: -6.0
    - formula: C120H186N24O63
    - notes: !!omap
      - CHARGE: '-6'
      - FORMULA: C120H186N24O63
    - annotation: !!omap
      - biggr: murein5p5p5p_p:-6
      - inchikey: FOZGDVCGOFWZKF-SSRSPRHQSA-G
      - metanetx.chemical: MNXM7807
      - sbo: SBO:0000247
      - seed.compound: cpd15512
  - !!omap
    - id: murein5p5p_p
    - name: Two linked disacharide pentapeptide murein units (uncrosslinked, 
        middle of chain)
    - compartment: C_p
    - charge: -4.0
    - formula: C80H124N16O42
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C80H124N16O42
    - annotation: !!omap
      - biggr: murein5p5p_p:-4
      - biocyc: META:CPD0-2283
      - inchikey: WSONNHVKPYOZEY-UHFFFAOYSA-E
      - metanetx.chemical: MNXM88345
      - sbo: SBO:0000247
      - seed.compound: cpd15511
  - !!omap
    - id: murein5px3p_p
    - name: Two disacharide linked murein units, pentapeptide corsslinked 
        tripeptide (A2pm->A2pm) (middle of chain)
    - compartment: C_p
    - charge: -4.0
    - formula: C74H112N14O39
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C74H112N14O39
    - annotation: !!omap
      - biggr: murein5px3p_p:-4
      - metanetx.chemical: MNXM5970
      - sbo: SBO:0000247
      - seed.compound: cpd15513
  - !!omap
    - id: __iPKB_Clostridiaceae__murein5px4p_p
    - name: Two disacharide linked murein units, pentapeptide crosslinked 
        tetrapeptide (A2pm->D-ala) (middle of chain)
    - compartment: C_p
    - charge: 0.0
    - formula: C77H117N15O40
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C77H117N15O40
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__murein5px4p_p:0
      - biocyc: META:CPD0-2278
      - inchikey: NQXCJQVWBSGGNW-UHFFFAOYSA-E
      - metanetx.chemical: MNXM88338
      - sbo: SBO:0000247
      - seed.compound: cpd15514
  - !!omap
    - id: __iPKB_Clostridiaceae__murein5px4px4p_p
    - name: Three disacharide linked murein units (pentapeptide crosslinked 
        tetrapeptide (A2pm->D-ala) tetrapeptide corsslinked tetrapeptide 
        (A2pm->D-ala)) (middle of chain)
    - compartment: C_p
    - charge: 0.0
    - formula: C114H172N22O59
    - notes: !!omap
      - CHARGE: '-6.0'
      - FORMULA: C114H172N22O59
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__murein5px4px4p_p:0
      - biocyc: META:CPD0-2296
      - inchikey: UVVIMBIDZMDRCG-UHFFFAOYSA-D
      - metanetx.chemical: MNXM87121
      - sbo: SBO:0000247
      - seed.compound: cpd15515
  - !!omap
    - id: 26dapime_c
    - name: N-acetyl-LL-2,6-diaminopimelate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C9H15N2O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C9H15N2O5
    - annotation: !!omap
      - biggr: 26dapime_c:-1
      - biocyc: META:CPD-1771
      - chebi:
        - CHEBI:58767
      - inchikey: KYVLWJXMCBZDRL-BQBZGAKWSA-M
      - kegg.compound: C04390
      - metanetx.chemical: MNXM1759
      - sbo: SBO:0000247
      - seed.compound: cpd02685
  - !!omap
    - id: na1_c
    - name: sodium(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: Na
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: Na
    - annotation: !!omap
      - biggr: na1_c:1
      - biocyc: META:NA+
      - chebi:
        - CHEBI:29101
      - hmdb: HMDB00588
      - inchikey: FKNQFGJONOIPTF-UHFFFAOYSA-N
      - kegg.compound: C01330
      - metanetx.chemical: MNXM27
      - reactome:
        - R-ALL-2872443
        - R-ALL-2892454
        - R-ALL-425958
        - R-ALL-425971
        - R-ALL-425977
        - R-ALL-74113
        - R-ALL-83910
      - sbo: SBO:0000247
      - seed.compound: cpd00971
  - !!omap
    - id: na1_e
    - name: sodium(1+)
    - compartment: C_e
    - charge: 1.0
    - formula: Na
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: Na
    - annotation: !!omap
      - biggr: na1_e:1
      - biocyc: META:NA+
      - chebi:
        - CHEBI:29101
      - hmdb: HMDB00588
      - inchikey: FKNQFGJONOIPTF-UHFFFAOYSA-N
      - kegg.compound: C01330
      - metanetx.chemical: MNXM27
      - reactome:
        - R-ALL-2872443
        - R-ALL-2892454
        - R-ALL-425958
        - R-ALL-425971
        - R-ALL-425977
        - R-ALL-74113
        - R-ALL-83910
      - sbo: SBO:0000247
      - seed.compound: cpd00971
  - !!omap
    - id: na1_p
    - name: sodium(1+)
    - compartment: C_p
    - charge: 1.0
    - formula: Na
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: Na
    - annotation: !!omap
      - biggr: na1_p:1
      - biocyc: META:NA+
      - chebi:
        - CHEBI:29101
      - hmdb: HMDB00588
      - inchikey: FKNQFGJONOIPTF-UHFFFAOYSA-N
      - kegg.compound: C01330
      - metanetx.chemical: MNXM27
      - reactome:
        - R-ALL-2872443
        - R-ALL-2892454
        - R-ALL-425958
        - R-ALL-425971
        - R-ALL-425977
        - R-ALL-74113
        - R-ALL-83910
      - sbo: SBO:0000247
      - seed.compound: cpd00971
  - !!omap
    - id: nac_c
    - name: nicotinate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H4NO2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H4NO2
    - annotation: !!omap
      - biggr: nac_c:-1
      - biocyc: META:NIACINE
      - chebi:
        - CHEBI:32544
      - hmdb: HMDB01488
      - inchikey: PVNIIMVLHYAWGP-UHFFFAOYSA-M
      - kegg.compound: C00253
      - kegg.drug: D00049
      - metanetx.chemical: MNXM274
      - reactome:
        - R-ALL-197230
        - R-ALL-8869604
      - sbo: SBO:0000247
      - seed.compound: cpd00218
  - !!omap
    - id: nad_c
    - name: NAD(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C21H26N7O14P2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C21H26N7O14P2
    - annotation: !!omap
      - biggr: nad_c:-1
      - biocyc: META:NAD
      - chebi:
        - CHEBI:57540
      - hmdb: HMDB00902
      - inchikey: BAWFJGJZGIEFAR-NNYOXOHSSA-M
      - kegg.compound: C00003
      - kegg.drug: D00002
      - metanetx.chemical: MNXM8
      - reactome:
        - R-ALL-113526
        - R-ALL-192307
        - R-ALL-194653
        - R-ALL-29360
        - R-ALL-352330
      - sbo: SBO:0000247
      - seed.compound: cpd00003
  - !!omap
    - id: nadh_c
    - name: NADH(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C21H27N7O14P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C21H27N7O14P2
    - annotation: !!omap
      - biggr: nadh_c:-2
      - biocyc: META:NADH
      - chebi:
        - CHEBI:57945
      - hmdb: HMDB01487
      - inchikey: BOPGDPNILDQYTO-NNYOXOHSSA-L
      - kegg.compound: C00004
      - metanetx.chemical: MNXM10
      - reactome:
        - R-ALL-192305
        - R-ALL-194697
        - R-ALL-29362
        - R-ALL-73473
      - sbo: SBO:0000247
      - seed.compound: cpd00004
  - !!omap
    - id: __iPKB_Clostridiaceae__nadhx__R_c
    - name: (R)-NADHX
    - compartment: C_c
    - charge: 0.0
    - formula: C21H29N7O15P2
    - notes: !!omap
      - FORMULA: C21H29N7O15P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__nadhx__R_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__nadhx__S_c
    - name: Adenosine 
        5'-(3-{5-[(2S)-5-carbamoyl-2-hydroxy-3,4-dihydropyridin-1-yl]-5-deoxy-?-D-ribofuranosyl}
        dihydrogen diphosphate)
    - compartment: C_c
    - charge: 0.0
    - formula: C21H29N7O15P2
    - notes: !!omap
      - FORMULA: C21H29N7O15P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__nadhx__S_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: nadp_c
    - name: NADP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C21H25N7O17P3
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C21H25N7O17P3
    - annotation: !!omap
      - biggr: nadp_c:-3
      - biocyc: META:NADP
      - chebi:
        - CHEBI:58349
      - hmdb: HMDB00217
      - inchikey: XJLXINKUBYWONI-NNYOXOHSSA-K
      - kegg.compound: C00006
      - metanetx.chemical: MNXM5
      - reactome:
        - R-ALL-113563
        - R-ALL-113564
        - R-ALL-194668
        - R-ALL-2000348
        - R-ALL-29366
        - R-ALL-351628
        - R-ALL-389556
        - R-ALL-5623650
        - R-ALL-6790191
      - sbo: SBO:0000247
      - seed.compound: cpd00006
  - !!omap
    - id: nadph_c
    - name: NADPH(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C21H26N7O17P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C21H26N7O17P3
    - annotation: !!omap
      - biggr: nadph_c:-4
      - biocyc: META:NADPH
      - chebi:
        - CHEBI:57783
      - hmdb:
        - HMDB00221
        - HMDB00799
        - HMDB06341
      - inchikey: ACFIXJIJDZMPPO-NNYOXOHSSA-J
      - kegg.compound: C00005
      - metanetx.chemical: MNXM6
      - reactome:
        - R-ALL-113600
        - R-ALL-113601
        - R-ALL-113602
        - R-ALL-194725
        - R-ALL-2000347
        - R-ALL-29364
        - R-ALL-351627
        - R-ALL-5623644
        - R-ALL-6790135
      - sbo: SBO:0000247
      - seed.compound: cpd00005
  - !!omap
    - id: __iPKB_Clostridiaceae__nadphx__R_c
    - name: (R)-NADPHX
    - compartment: C_c
    - charge: 0.0
    - formula: C21H28N7O18P3
    - notes: !!omap
      - FORMULA: C21H28N7O18P3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__nadphx__R_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__nadphx__S_c
    - name: (S)-NADPHX
    - compartment: C_c
    - charge: 0.0
    - formula: C21H28N7O18P3
    - notes: !!omap
      - FORMULA: C21H28N7O18P3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__nadphx__S_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: acamoxm_c
    - name: (S)-2-acetamido-6-oxopimelate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H11NO6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H11NO6
    - annotation: !!omap
      - biggr: acamoxm_c:-2
      - biocyc: META:N-ACETYL-L-2-AMINO-6-OXO-PIMELATE
      - chebi:
        - CHEBI:58117
      - inchikey: RVHKMLVNOXVQRH-LURJTMIESA-L
      - kegg.compound: C05539
      - metanetx.chemical: MNXM1872
      - sbo: SBO:0000247
      - seed.compound: cpd03289
  - !!omap
    - id: ncam_c
    - name: nicotinamide
    - compartment: C_c
    - charge: 0.0
    - formula: C6H6N2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H6N2O
    - annotation: !!omap
      - biggr: ncam_c:0
      - biocyc: META:NIACINAMIDE
      - chebi:
        - CHEBI:17154
      - hmdb: HMDB01406
      - inchikey: DFPAKSUCGFBDDF-UHFFFAOYSA-N
      - kegg.compound: C00153
      - kegg.drug: D00036
      - metanetx.chemical: MNXM216
      - reactome:
        - R-ALL-197277
        - R-ALL-8870343
      - sbo: SBO:0000247
      - seed.compound: cpd00133
  - !!omap
    - id: nh4_c:0
    - name: ammonia
    - compartment: C_c
    - charge: 0.0
    - formula: H3N
    - notes: !!omap
      - FORMULA: H3N
    - annotation: !!omap
      - biggr: nh4_c:0
      - biocyc:
        - META:AMMONIA
        - META:AMMONIUM
      - chebi:
        - CHEBI:16134
      - hmdb:
        - HMDB00051
        - HMDB41827
      - inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O
      - kegg.compound:
        - C00014
        - C01342
      - kegg.drug:
        - D02915
        - D02916
      - metanetx.chemical: MNXM15
      - reactome:
        - R-ALL-1132163
        - R-ALL-113561
        - R-ALL-140912
        - R-ALL-2022135
        - R-ALL-29382
        - R-ALL-31633
        - R-ALL-389843
        - R-ALL-5693978
        - R-ALL-76230
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00013
        - cpd19013
  - !!omap
    - id: nh4_c:1
    - name: ammonium
    - compartment: C_c
    - charge: 1.0
    - formula: H4N
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: H4N
    - annotation: !!omap
      - biggr: nh4_c:1
      - biocyc:
        - META:AMMONIA
        - META:AMMONIUM
      - chebi:
        - CHEBI:28938
      - hmdb:
        - HMDB00051
        - HMDB41827
      - inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O
      - kegg.compound:
        - C00014
        - C01342
      - kegg.drug:
        - D02915
        - D02916
      - metanetx.chemical: MNXM15
      - reactome:
        - R-ALL-1132163
        - R-ALL-113561
        - R-ALL-140912
        - R-ALL-2022135
        - R-ALL-29382
        - R-ALL-31633
        - R-ALL-389843
        - R-ALL-5693978
        - R-ALL-76230
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00013
        - cpd19013
  - !!omap
    - id: nh4_e
    - name: ammonium
    - compartment: C_e
    - charge: 1.0
    - formula: H4N
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: H4N
    - annotation: !!omap
      - biggr: nh4_e:1
      - biocyc:
        - META:AMMONIA
        - META:AMMONIUM
      - chebi:
        - CHEBI:28938
      - hmdb:
        - HMDB00051
        - HMDB41827
      - inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O
      - kegg.compound:
        - C00014
        - C01342
      - kegg.drug:
        - D02915
        - D02916
      - metanetx.chemical: MNXM15
      - reactome:
        - R-ALL-1132163
        - R-ALL-113561
        - R-ALL-140912
        - R-ALL-2022135
        - R-ALL-29382
        - R-ALL-31633
        - R-ALL-389843
        - R-ALL-5693978
        - R-ALL-76230
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00013
        - cpd19013
  - !!omap
    - id: nh4_p
    - name: ammonium
    - compartment: C_p
    - charge: 1.0
    - formula: H4N
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: H4N
    - annotation: !!omap
      - biggr: nh4_p:1
      - biocyc:
        - META:AMMONIA
        - META:AMMONIUM
      - chebi:
        - CHEBI:28938
      - hmdb:
        - HMDB00051
        - HMDB41827
      - inchikey: QGZKDVFQNNGYKY-UHFFFAOYSA-O
      - kegg.compound:
        - C00014
        - C01342
      - kegg.drug:
        - D02915
        - D02916
      - metanetx.chemical: MNXM15
      - reactome:
        - R-ALL-1132163
        - R-ALL-113561
        - R-ALL-140912
        - R-ALL-2022135
        - R-ALL-29382
        - R-ALL-31633
        - R-ALL-389843
        - R-ALL-5693978
        - R-ALL-76230
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00013
        - cpd19013
  - !!omap
    - id: ni2_c
    - name: nickel(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Ni
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Ni
    - annotation: !!omap
      - biggr: ni2_c:2
      - biocyc: META:NI+2
      - chebi:
        - CHEBI:49786
      - hmdb: HMDB02457
      - inchikey: VEQPNABPJHWNSG-UHFFFAOYSA-N
      - kegg.compound: C19609
      - metanetx.chemical: MNXM3673
      - sbo: SBO:0000247
      - seed.compound: cpd20862
  - !!omap
    - id: ni2_e
    - name: nickel(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Ni
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Ni
    - annotation: !!omap
      - biggr: ni2_e:2
      - biocyc: META:NI+2
      - chebi:
        - CHEBI:49786
      - hmdb: HMDB02457
      - inchikey: VEQPNABPJHWNSG-UHFFFAOYSA-N
      - kegg.compound: C19609
      - metanetx.chemical: MNXM3673
      - sbo: SBO:0000247
      - seed.compound: cpd20862
  - !!omap
    - id: nicrnt_c
    - name: nicotinate D-ribonucleotide(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C11H12NO9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C11H12NO9P
    - annotation: !!omap
      - biggr: nicrnt_c:-2
      - biocyc: META:NICOTINATE_NUCLEOTIDE
      - chebi:
        - CHEBI:57502
      - hmdb: HMDB59646
      - inchikey: JOUIQRNQJGXQDC-ZYUZMQFOSA-L
      - kegg.compound: C01185
      - metanetx.chemical: MNXM194
      - reactome:
        - R-ALL-197220
        - R-ALL-200492
        - R-ALL-8938083
      - sbo: SBO:0000247
      - seed.compound: cpd00873
  - !!omap
    - id: nmn_c
    - name: NMN(-)
    - compartment: C_c
    - charge: -1.0
    - formula: C11H14N2O8P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C11H14N2O8P
    - annotation: !!omap
      - biggr: nmn_c:-1
      - biocyc: META:NICOTINAMIDE_NUCLEOTIDE
      - chebi:
        - CHEBI:14649
      - hmdb:
        - HMDB00229
        - HMDB59645
      - inchikey: DAYLJWODMCOQEW-TURQNECASA-M
      - kegg.compound: C00455
      - metanetx.chemical: MNXM355
      - reactome:
        - R-ALL-549282
        - R-ALL-8869353
        - R-ALL-8940067
      - sbo: SBO:0000247
      - seed.compound: cpd00355
  - !!omap
    - id: no2_c
    - name: nitrite
    - compartment: C_c
    - charge: -1.0
    - formula: NO2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: NO2
    - annotation: !!omap
      - biggr: no2_c:-1
      - biocyc: META:NITRITE
      - chebi:
        - CHEBI:16301
      - hmdb: HMDB02786
      - inchikey: IOVCWXUNBOPUCH-UHFFFAOYSA-M
      - kegg.compound: C00088
      - metanetx.chemical: MNXM107
      - reactome: R-ALL-1222379
      - sbo: SBO:0000247
      - seed.compound: cpd00075
  - !!omap
    - id: no3_c
    - name: nitrate
    - compartment: C_c
    - charge: -1.0
    - formula: NO3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: NO3
    - annotation: !!omap
      - biggr: no3_c:-1
      - biocyc:
        - META:CPD-15028
        - META:NITRATE
      - chebi:
        - CHEBI:17632
      - hmdb:
        - HMDB01853
        - HMDB02878
      - inchikey: NHNBFGGVMKEFGY-UHFFFAOYSA-N
      - kegg.compound: C00244
      - kegg.drug: D02313
      - metanetx.chemical: MNXM207
      - sbo: SBO:0000247
      - seed.compound: cpd00209
  - !!omap
    - id: no3_e
    - name: nitrate
    - compartment: C_e
    - charge: -1.0
    - formula: NO3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: NO3
    - annotation: !!omap
      - biggr: no3_e:-1
      - biocyc:
        - META:CPD-15028
        - META:NITRATE
      - chebi:
        - CHEBI:17632
      - hmdb:
        - HMDB01853
        - HMDB02878
      - inchikey: NHNBFGGVMKEFGY-UHFFFAOYSA-N
      - kegg.compound: C00244
      - kegg.drug: D02313
      - metanetx.chemical: MNXM207
      - sbo: SBO:0000247
      - seed.compound: cpd00209
  - !!omap
    - id: no_c
    - name: nitric oxide
    - compartment: C_c
    - charge: 0.0
    - formula: NO
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: NO
    - annotation: !!omap
      - biggr: no_c:0
      - biocyc: META:NITRIC-OXIDE
      - chebi:
        - CHEBI:16480
      - hmdb: HMDB03378
      - inchikey: MWUXSHHQAYIFBG-UHFFFAOYSA-N
      - kegg.compound: C00533
      - kegg.drug: D00074
      - metanetx.chemical: MNXM228
      - sbo: SBO:0000247
  - !!omap
    - id: no_p
    - name: nitric oxide
    - compartment: C_p
    - charge: 0.0
    - formula: NO
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: NO
    - annotation: !!omap
      - biggr: no_p:0
      - biocyc: META:NITRIC-OXIDE
      - chebi:
        - CHEBI:16480
      - hmdb: HMDB03378
      - inchikey: MWUXSHHQAYIFBG-UHFFFAOYSA-N
      - kegg.compound: C00533
      - kegg.drug: D00074
      - metanetx.chemical: MNXM228
      - sbo: SBO:0000247
  - !!omap
    - id: o2_c
    - name: dioxygen
    - compartment: C_c
    - charge: 0.0
    - formula: O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: O2
    - annotation: !!omap
      - biggr: o2_c:0
      - biocyc: META:OXYGEN-MOLECULE
      - chebi:
        - CHEBI:15379
      - hmdb: HMDB01377
      - inchikey: MYMOFIZGZYHOMD-UHFFFAOYSA-N
      - kegg.compound: C00007
      - kegg.drug: D00003
      - metanetx.chemical: MNXM4
      - reactome:
        - R-ALL-1131511
        - R-ALL-113533
        - R-ALL-113534
        - R-ALL-113535
        - R-ALL-113685
        - R-ALL-1236709
        - R-ALL-189461
        - R-ALL-29368
        - R-ALL-351593
        - R-ALL-352327
        - R-ALL-5668566
      - sbo: SBO:0000247
      - seed.compound: cpd00007
  - !!omap
    - id: o2_e
    - name: dioxygen
    - compartment: C_e
    - charge: 0.0
    - formula: O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: O2
    - annotation: !!omap
      - biggr: o2_e:0
      - biocyc: META:OXYGEN-MOLECULE
      - chebi:
        - CHEBI:15379
      - hmdb: HMDB01377
      - inchikey: MYMOFIZGZYHOMD-UHFFFAOYSA-N
      - kegg.compound: C00007
      - kegg.drug: D00003
      - metanetx.chemical: MNXM4
      - reactome:
        - R-ALL-1131511
        - R-ALL-113533
        - R-ALL-113534
        - R-ALL-113535
        - R-ALL-113685
        - R-ALL-1236709
        - R-ALL-189461
        - R-ALL-29368
        - R-ALL-351593
        - R-ALL-352327
        - R-ALL-5668566
      - sbo: SBO:0000247
      - seed.compound: cpd00007
  - !!omap
    - id: o2_p
    - name: dioxygen
    - compartment: C_p
    - charge: 0.0
    - formula: O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: O2
    - annotation: !!omap
      - biggr: o2_p:0
      - biocyc: META:OXYGEN-MOLECULE
      - chebi:
        - CHEBI:15379
      - hmdb: HMDB01377
      - inchikey: MYMOFIZGZYHOMD-UHFFFAOYSA-N
      - kegg.compound: C00007
      - kegg.drug: D00003
      - metanetx.chemical: MNXM4
      - reactome:
        - R-ALL-1131511
        - R-ALL-113533
        - R-ALL-113534
        - R-ALL-113535
        - R-ALL-113685
        - R-ALL-1236709
        - R-ALL-189461
        - R-ALL-29368
        - R-ALL-351593
        - R-ALL-352327
        - R-ALL-5668566
      - sbo: SBO:0000247
      - seed.compound: cpd00007
  - !!omap
    - id: o2s_c
    - name: superoxide
    - compartment: C_c
    - charge: -1.0
    - formula: O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: O2
    - annotation: !!omap
      - biggr: o2s_c:-1
      - biocyc: META:SUPER-OXIDE
      - chebi:
        - CHEBI:18421
      - hmdb: HMDB02168
      - inchikey: OUUQCZGPVNCOIJ-UHFFFAOYSA-M
      - kegg.compound: C00704
      - metanetx.chemical: MNXM330
      - reactome:
        - R-ALL-1222461
        - R-ALL-1470070
        - R-ALL-1475048
      - sbo: SBO:0000247
  - !!omap
    - id: oaa_c
    - name: oxaloacetate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H2O5
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H2O5
    - annotation: !!omap
      - biggr: oaa_c:-2
      - biocyc: META:OXALACETIC_ACID
      - chebi:
        - CHEBI:16452
      - hmdb: HMDB00223
      - inchikey: KHPXUQMNIQBQEV-UHFFFAOYSA-L
      - kegg.compound: C00036
      - lipidmaps: LMFA01170120
      - metanetx.chemical: MNXM46
      - reactome:
        - R-ALL-113587
        - R-ALL-6810070
        - R-ALL-76213
      - sbo: SBO:0000247
      - seed.compound: cpd00032
  - !!omap
    - id: __iPKB_Clostridiaceae__oc2coa_c
    - name: Trans-Oct-2-enoyl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C29H44N7O17P3S
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C29H44N7O17P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__oc2coa_c:0
      - biocyc: META:CPD0-2108
      - chebi:
        - CHEBI:10732
        - CHEBI:27078
        - CHEBI:27537
        - CHEBI:62242
      - hmdb: HMDB03949
      - inchikey: CPSDNAXXKWVYIY-NTLMCJQISA-J
      - kegg.compound: C05276
      - lipidmaps:
        - LMFA07050024
        - LMFA07050394
      - metanetx.chemical: MNXM784
      - reactome:
        - R-ALL-6809800
        - R-ALL-77332
      - sbo: SBO:0000247
      - seed.compound: cpd03130
  - !!omap
    - id: octcoa_c
    - name: octanoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C29H46N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C29H46N7O17P3S
    - annotation: !!omap
      - biggr: octcoa_c:-4
      - biocyc: META:CPD-196
      - chebi:
        - CHEBI:57386
      - hmdb:
        - HMDB01070
        - HMDB06257
      - inchikey: KQMZYOXOBSXMII-CECATXLMSA-J
      - kegg.compound: C01944
      - lipidmaps: LMFA07050355
      - metanetx.chemical: MNXM342
      - reactome:
        - R-ALL-390303
        - R-ALL-77337
      - sbo: SBO:0000247
      - seed.compound: cpd01335
  - !!omap
    - id: octdp_c
    - name: all-trans-octaprenyl diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C40H65O7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C40H65O7P2
    - annotation: !!omap
      - biggr: octdp_c:-3
      - biocyc: META:OCTAPRENYL-DIPHOSPHATE
      - chebi:
        - CHEBI:57711
      - hmdb: HMDB01094
      - inchikey: IKKLDISSULFFQO-DJMILUHSSA-K
      - kegg.compound: C04146
      - lipidmaps: LMPR01070226
      - metanetx.chemical: MNXM811
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02557
        - cpd30761
  - !!omap
    - id: ohpb_c
    - name: (R)-3-hydroxy-2-oxo-4-(phosphonatoooxy)butanoate
    - compartment: C_c
    - charge: -3.0
    - formula: C4H4O8P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C4H4O8P
    - annotation: !!omap
      - biggr: ohpb_c:-3
      - biocyc: META:3OH-4P-OH-ALPHA-KETOBUTYRATE
      - chebi:
        - CHEBI:58538
      - hmdb: HMDB06801
      - inchikey: MZJFVXDTNBHTKZ-UWTATZPHSA-K
      - kegg.compound: C06054
      - metanetx.chemical: MNXM1514
      - sbo: SBO:0000247
      - seed.compound: cpd03606
  - !!omap
    - id: orn__L_c:1
    - name: L-ornithinium(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: C5H13N2O2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C5H13N2O2
    - annotation: !!omap
      - biggr: orn__L_c:1
      - biocyc: META:L-ORNITHINE
      - chebi:
        - CHEBI:46911
      - hmdb:
        - HMDB00214
        - HMDB00818
        - HMDB04984
        - HMDB32455
        - HMDB62654
        - HMDB62718
      - inchikey: AHLPHDHHMVZTML-BYPYZUCNSA-O
      - kegg.compound:
        - C00077
        - C01602
      - kegg.drug: D08302
      - lipidmaps: LMFA01100057
      - metanetx.chemical: MNXM89689
      - reactome:
        - R-ALL-113585
        - R-ALL-113586
        - R-ALL-29498
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00064
        - cpd19016
  - !!omap
    - id: __iPKB_Clostridiaceae__orn__L_DUP1_c
    - name: ''
    - compartment: C_c
    - charge: 1.0
    - formula: C5H13N2O2
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C5H13N2O2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__orn__L_DUP1_c:1
      - biocyc: META:L-ORNITHINE
      - chebi:
        - CHEBI:11448
        - CHEBI:13148
        - CHEBI:15729
        - CHEBI:18257
        - CHEBI:19370
        - CHEBI:21367
        - CHEBI:32964
        - CHEBI:44667
        - CHEBI:46911
        - CHEBI:46912
        - CHEBI:46913
        - CHEBI:46914
        - CHEBI:6280
        - CHEBI:7784
      - hmdb:
        - HMDB00214
        - HMDB00818
        - HMDB04984
        - HMDB32455
        - HMDB62654
        - HMDB62718
      - inchikey: AHLPHDHHMVZTML-BYPYZUCNSA-O
      - kegg.compound:
        - C00077
        - C01602
      - kegg.drug: D08302
      - lipidmaps: LMFA01100057
      - metanetx.chemical: MNXM89689
      - reactome:
        - R-ALL-113585
        - R-ALL-113586
        - R-ALL-29498
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00064
        - cpd19016
  - !!omap
    - id: orot5p_c
    - name: orotidine 5'-phosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C10H10N2O11P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C10H10N2O11P
    - annotation: !!omap
      - biggr: orot5p_c:-3
      - biocyc: META:OROTIDINE-5-PHOSPHATE
      - chebi:
        - CHEBI:57538
      - hmdb: HMDB00218
      - inchikey: KYOBSHFOBAOFBF-XVFCMESISA-K
      - kegg.compound: C01103
      - metanetx.chemical: MNXM519
      - reactome: R-ALL-111629
      - sbo: SBO:0000247
      - seed.compound: cpd00810
  - !!omap
    - id: orot_c
    - name: orotate
    - compartment: C_c
    - charge: -1.0
    - formula: C5H3N2O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H3N2O4
    - annotation: !!omap
      - biggr: orot_c:-1
      - biocyc: META:OROTATE
      - chebi:
        - CHEBI:30839
      - hmdb: HMDB00226
      - inchikey: PXQPEWDEAKTCGB-UHFFFAOYSA-M
      - kegg.compound: C00295
      - kegg.drug: D00055
      - metanetx.chemical: MNXM235
      - reactome: R-ALL-76632
      - sbo: SBO:0000247
      - seed.compound: cpd00247
  - !!omap
    - id: pa160_c
    - name: 1,2-dihexadecanoyl-sn-glycerol-3-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C35H67O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C35H67O8P
    - annotation: !!omap
      - biggr: pa160_c:-2
      - biocyc: META:CPD0-1422
      - chebi:
        - CHEBI:72859
      - hmdb:
        - HMDB00674
        - HMDB07857
      - inchikey: PORPENFLTBBHSG-MGBGTMOVSA-L
      - lipidmaps: LMGP10010027
      - metanetx.chemical: MNXM17312
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15524
        - cpd26147
  - !!omap
    - id: pa160_p
    - name: 1,2-dihexadecanoyl-sn-glycerol-3-phosphate(2-)
    - compartment: C_p
    - charge: -2.0
    - formula: C35H67O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C35H67O8P
    - annotation: !!omap
      - biggr: pa160_p:-2
      - biocyc: META:CPD0-1422
      - chebi:
        - CHEBI:72859
      - hmdb:
        - HMDB00674
        - HMDB07857
      - inchikey: PORPENFLTBBHSG-MGBGTMOVSA-L
      - lipidmaps: LMGP10010027
      - metanetx.chemical: MNXM17312
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15524
        - cpd26147
  - !!omap
    - id: pan4p_c
    - name: D-pantetheine 4'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C11H21N2O7PS
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C11H21N2O7PS
    - annotation: !!omap
      - biggr: pan4p_c:-2
      - biocyc:
        - META:PANTETHEINE-P
        - META:PHOSPHOPANTOTHEINE-GROUP
      - chebi:
        - CHEBI:61723
      - hmdb: HMDB01416
      - inchikey: JDMUPRLRUUMCTL-VIFPVBQESA-L
      - kegg.compound: C01134
      - metanetx.chemical: MNXM373
      - reactome:
        - R-ALL-196767
        - R-ALL-6809358
        - R-ALL-8939005
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00834
        - cpd27792
  - !!omap
    - id: pant__R_c
    - name: (R)-pantoate
    - compartment: C_c
    - charge: -1.0
    - formula: C6H11O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C6H11O4
    - annotation: !!omap
      - biggr: pant__R_c:-1
      - biocyc: META:L-PANTOATE
      - chebi:
        - CHEBI:15980
      - inchikey: OTOIIPJYVQJATP-BYPYZUCNSA-M
      - kegg.compound: C00522
      - metanetx.chemical: MNXM593
      - sbo: SBO:0000247
      - seed.compound: cpd00408
  - !!omap
    - id: pc1_c
    - name: precorrin-1
    - compartment: C_c
    - charge: 0.0
    - formula: C41H46N4O16
    - notes: !!omap
      - FORMULA: C41H46N4O16
    - annotation: !!omap
      - biggr: pc1_c:0
      - chebi:
        - CHEBI:52469
      - sbo: SBO:0000247
  - !!omap
    - id: pep_c
    - name: phosphonatoenolpyruvate
    - compartment: C_c
    - charge: -3.0
    - formula: C3H2O6P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C3H2O6P
    - annotation: !!omap
      - biggr: pep_c:-3
      - biocyc: META:PHOSPHO-ENOL-PYRUVATE
      - chebi:
        - CHEBI:58702
      - hmdb: HMDB00263
      - inchikey: DTBNBXWJWCWCIK-UHFFFAOYSA-K
      - kegg.compound: C00074
      - metanetx.chemical: MNXM73
      - reactome:
        - R-ALL-29492
        - R-ALL-372364
      - sbo: SBO:0000247
      - seed.compound: cpd00061
  - !!omap
    - id: __iPKB_Clostridiaceae__pg160_c
    - name: Phosphatidylglycerol (dihexadecanoyl, n-C16:0)
    - compartment: C_c
    - charge: 0.0
    - formula: C38H74O10P
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C38H74O10P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pg160_c:0
      - biocyc: META:CPD-8260
      - chebi:
        - CHEBI:72829
        - CHEBI:73205
        - CHEBI:75159
      - hmdb: HMDB10570
      - inchikey: BIABMEZBCHDPBV-MPQUPPDSSA-M
      - lipidmaps: LMGP04010986
      - metanetx.chemical: MNXM32179
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15538
        - cpd25117
  - !!omap
    - id: __iPKB_Clostridiaceae__pg160_p
    - name: Phosphatidylglycerol (dihexadecanoyl, n-C16:0)
    - compartment: C_p
    - charge: 0.0
    - formula: C38H74O10P
    - notes: !!omap
      - CHARGE: '-1.0'
      - FORMULA: C38H74O10P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pg160_p:0
      - biocyc: META:CPD-8260
      - chebi:
        - CHEBI:72829
        - CHEBI:73205
        - CHEBI:75159
      - hmdb: HMDB10570
      - inchikey: BIABMEZBCHDPBV-MPQUPPDSSA-M
      - lipidmaps: LMGP04010986
      - metanetx.chemical: MNXM32179
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15538
        - cpd25117
  - !!omap
    - id: __iPKB_Clostridiaceae__pgp160_c
    - name: Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)
    - compartment: C_c
    - charge: 0.0
    - formula: C38H73O13P2
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C38H73O13P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pgp160_c:0
      - biocyc: META:CPD-12821
      - hmdb: HMDB13472
      - inchikey: ONJBJMDJKLHMEK-MPQUPPDSSA-K
      - metanetx.chemical: MNXM32180
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15545
        - cpd23599
  - !!omap
    - id: __iPKB_Clostridiaceae__pgp160_p
    - name: Phosphatidylglycerophosphate (dihexadecanoyl, n-C16:0)
    - compartment: C_p
    - charge: 0.0
    - formula: C38H73O13P2
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C38H73O13P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pgp160_p:0
      - biocyc: META:CPD-12821
      - hmdb: HMDB13472
      - inchikey: ONJBJMDJKLHMEK-MPQUPPDSSA-K
      - metanetx.chemical: MNXM32180
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15545
        - cpd23599
  - !!omap
    - id: phe__L_c
    - name: L-phenylalanine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C9H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H11NO2
    - annotation: !!omap
      - biggr: phe__L_c:0
      - biocyc: META:PHE
      - chebi:
        - CHEBI:58095
        - CHEBI:17295
      - hmdb:
        - HMDB00159
        - HMDB00612
      - inchikey: COLNVLDHVKWLRT-QMMMGPOBSA-N
      - kegg.compound:
        - C00079
        - C02057
      - kegg.drug: D00021
      - metanetx.chemical: MNXM97
      - reactome:
        - R-ALL-29502
        - R-ALL-351993
        - R-ALL-379701
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00066
        - cpd01400
  - !!omap
    - id: phe__L_e
    - name: L-phenylalanine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C9H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H11NO2
    - annotation: !!omap
      - biggr: phe__L_e:0
      - biocyc: META:PHE
      - chebi:
        - CHEBI:58095
        - CHEBI:17295
      - hmdb:
        - HMDB00159
        - HMDB00612
      - inchikey: COLNVLDHVKWLRT-QMMMGPOBSA-N
      - kegg.compound:
        - C00079
        - C02057
      - kegg.drug: D00021
      - metanetx.chemical: MNXM97
      - reactome:
        - R-ALL-29502
        - R-ALL-351993
        - R-ALL-379701
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00066
        - cpd01400
  - !!omap
    - id: pheme_c
    - name: ferroheme b(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C34H30FeN4O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C34H30FeN4O4
    - annotation: !!omap
      - biggr: pheme_c:-2
      - biocyc: META:PROTOHEME
      - chebi:
        - CHEBI:60344
      - inchikey: KABFMIBPWCXCRK-RGGAHWMASA-J
      - kegg.compound: C00032
      - metanetx.chemical: MNXM249
      - reactome:
        - R-ALL-189444
        - R-ALL-71185
        - R-ALL-917877
      - sbo: SBO:0000247
  - !!omap
    - id: pheme_e
    - name: ferroheme b(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: C34H30FeN4O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C34H30FeN4O4
    - annotation: !!omap
      - biggr: pheme_e:-2
      - biocyc: META:PROTOHEME
      - chebi:
        - CHEBI:60344
      - inchikey: KABFMIBPWCXCRK-RGGAHWMASA-J
      - kegg.compound: C00032
      - metanetx.chemical: MNXM249
      - reactome:
        - R-ALL-189444
        - R-ALL-71185
        - R-ALL-917877
      - sbo: SBO:0000247
  - !!omap
    - id: phom_c
    - name: O-phosphonato-L-homoserine(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H8NO6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H8NO6P
    - annotation: !!omap
      - biggr: phom_c:-2
      - biocyc: META:O-PHOSPHO-L-HOMOSERINE
      - chebi:
        - CHEBI:57590
      - hmdb:
        - HMDB03484
        - HMDB06495
        - HMDB62692
      - inchikey: FXDNYOANAXWZHG-VKHMYHEASA-L
      - kegg.compound: C01102
      - metanetx.chemical: MNXM1334
      - sbo: SBO:0000247
      - seed.compound: cpd00809
  - !!omap
    - id: phpyr_c
    - name: enol-phenylpyruvate
    - compartment: C_c
    - charge: -1.0
    - formula: C9H7O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C9H7O3
    - annotation: !!omap
      - biggr: phpyr_c:-1
      - biocyc: META:PHENYL-PYRUVATE
      - chebi:
        - CHEBI:18005
        - CHEBI:16815
      - hmdb:
        - HMDB00205
        - HMDB01237
        - HMDB31629
      - inchikey: BTNMPGBKDVTSJY-UHFFFAOYSA-M
      - kegg.compound: C00166
      - metanetx.chemical: MNXM162242
      - sbo: SBO:0000247
      - seed.compound: cpd00143
  - !!omap
    - id: phthr_c
    - name: 4-(phosphonatooxy)-L-threonine(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H8NO7P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H8NO7P
    - annotation: !!omap
      - biggr: phthr_c:-2
      - biocyc: META:4-PHOSPHONOOXY-THREONINE
      - chebi:
        - CHEBI:58452
      - hmdb: HMDB06802
      - inchikey: FKHAKIJOKDGEII-GBXIJSLDSA-L
      - kegg.compound: C06055
      - metanetx.chemical: MNXM759
      - sbo: SBO:0000247
      - seed.compound:
        - cpd03607
        - cpd22119
  - !!omap
    - id: pi_c
    - name: hydrogenphosphate
    - compartment: C_c
    - charge: -2.0
    - formula: HO4P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: HO4P
    - annotation: !!omap
      - biggr: pi_c:-2
      - biocyc:
        - META:CPD-16459
        - META:PHOSPHATE-GROUP
        - META:Pi
      - chebi:
        - CHEBI:43474
      - hmdb:
        - HMDB00973
        - HMDB01429
        - HMDB02105
        - HMDB02142
        - HMDB05947
      - inchikey: NBIIXXVUZAFLBC-UHFFFAOYSA-L
      - kegg.compound: C00009
      - kegg.drug: D05467
      - metanetx.chemical: MNXM9
      - reactome:
        - R-ALL-109277
        - R-ALL-113548
        - R-ALL-113550
        - R-ALL-113551
        - R-ALL-29372
        - R-ALL-5228339
        - R-ALL-8851226
        - R-ALL-8851513
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00009
        - cpd27787
  - !!omap
    - id: pi_e
    - name: hydrogenphosphate
    - compartment: C_e
    - charge: -2.0
    - formula: HO4P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: HO4P
    - annotation: !!omap
      - biggr: pi_e:-2
      - biocyc:
        - META:CPD-16459
        - META:PHOSPHATE-GROUP
        - META:Pi
      - chebi:
        - CHEBI:43474
      - hmdb:
        - HMDB00973
        - HMDB01429
        - HMDB02105
        - HMDB02142
        - HMDB05947
      - inchikey: NBIIXXVUZAFLBC-UHFFFAOYSA-L
      - kegg.compound: C00009
      - kegg.drug: D05467
      - metanetx.chemical: MNXM9
      - reactome:
        - R-ALL-109277
        - R-ALL-113548
        - R-ALL-113550
        - R-ALL-113551
        - R-ALL-29372
        - R-ALL-5228339
        - R-ALL-8851226
        - R-ALL-8851513
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00009
        - cpd27787
  - !!omap
    - id: pi_p
    - name: hydrogenphosphate
    - compartment: C_p
    - charge: -2.0
    - formula: HO4P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: HO4P
    - annotation: !!omap
      - biggr: pi_p:-2
      - biocyc:
        - META:CPD-16459
        - META:PHOSPHATE-GROUP
        - META:Pi
      - chebi:
        - CHEBI:43474
      - hmdb:
        - HMDB00973
        - HMDB01429
        - HMDB02105
        - HMDB02142
        - HMDB05947
      - inchikey: NBIIXXVUZAFLBC-UHFFFAOYSA-L
      - kegg.compound: C00009
      - kegg.drug: D05467
      - metanetx.chemical: MNXM9
      - reactome:
        - R-ALL-109277
        - R-ALL-113548
        - R-ALL-113550
        - R-ALL-113551
        - R-ALL-29372
        - R-ALL-5228339
        - R-ALL-8851226
        - R-ALL-8851513
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00009
        - cpd27787
  - !!omap
    - id: pmtcoa_c
    - name: palmitoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C37H62N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C37H62N7O17P3S
    - annotation: !!omap
      - biggr: pmtcoa_c:-4
      - biocyc: META:PALMITYL-COA
      - chebi:
        - CHEBI:57379
      - hmdb:
        - HMDB01338
        - HMDB59623
      - inchikey: MNBKLUUYKPBKDU-BBECNAHFSA-J
      - kegg.compound: C00154
      - lipidmaps: LMFA07050360
      - metanetx.chemical: MNXM88
      - reactome: R-ALL-5358339
      - sbo: SBO:0000247
      - seed.compound: cpd00134
  - !!omap
    - id: pnto__R_c
    - name: (R)-pantothenate
    - compartment: C_c
    - charge: -1.0
    - formula: C9H16NO5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C9H16NO5
    - annotation: !!omap
      - biggr: pnto__R_c:-1
      - biocyc: META:PANTOTHENATE
      - chebi:
        - CHEBI:29032
      - hmdb:
        - HMDB00210
        - HMDB62717
      - inchikey: GHOKWGTUZJEAQD-ZETCQYMHSA-M
      - kegg.compound: C00864
      - kegg.drug: D07413
      - metanetx.chemical: MNXM364
      - reactome:
        - R-ALL-196820
        - R-ALL-199192
      - sbo: SBO:0000247
      - seed.compound: cpd00644
  - !!omap
    - id: prpnte_c
    - name: propionate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H5O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H5O2
    - annotation: !!omap
      - biggr: prpnte_c:-1
      - chebi:
        - CHEBI:17272
      - metanetx.chemical: MNXM162260
      - sbo: SBO:0000247
  - !!omap
    - id: ppac_c
    - name: phosphonoacetic acid
    - compartment: C_c
    - charge: 0.0
    - formula: C2H5O5P
    - notes: !!omap
      - FORMULA: C2H5O5P
    - annotation: !!omap
      - biggr: ppac_c:0
      - chebi:
        - CHEBI:15732
      - sbo: SBO:0000247
  - !!omap
    - id: ppal_c
    - name: propanal
    - compartment: C_c
    - charge: 0.0
    - formula: C3H6O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H6O
    - annotation: !!omap
      - biggr: ppal_c:0
      - biocyc: META:CPD-665
      - chebi:
        - CHEBI:17153
      - hmdb: HMDB03366
      - inchikey: NBBJYMSMWIIQGU-UHFFFAOYSA-N
      - kegg.compound: C00479
      - metanetx.chemical: MNXM821
      - sbo: SBO:0000247
      - seed.compound: cpd00371
  - !!omap
    - id: ppap_c
    - name: propanoyl phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C3H5O5P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C3H5O5P
    - annotation: !!omap
      - biggr: ppap_c:-2
      - biocyc: META:PROPIONYL-P
      - chebi:
        - CHEBI:58933
      - inchikey: FMNMEQSRDWIBFO-UHFFFAOYSA-L
      - kegg.compound: C02876
      - metanetx.chemical: MNXM1499
      - sbo: SBO:0000247
      - seed.compound: cpd01844
  - !!omap
    - id: ppap_e
    - name: propanoyl phosphate(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: C3H5O5P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C3H5O5P
    - annotation: !!omap
      - biggr: ppap_e:-2
      - biocyc: META:PROPIONYL-P
      - chebi:
        - CHEBI:58933
      - inchikey: FMNMEQSRDWIBFO-UHFFFAOYSA-L
      - kegg.compound: C02876
      - metanetx.chemical: MNXM1499
      - sbo: SBO:0000247
      - seed.compound: cpd01844
  - !!omap
    - id: ppt_c
    - name: phosphonic acid
    - compartment: C_c
    - charge: 0.0
    - formula: H3O3P
    - notes: !!omap
      - FORMULA: H3O3P
    - annotation: !!omap
      - biggr: ppt_c:0
      - chebi:
        - CHEBI:36361
        - CHEBI:44976
      - sbo: SBO:0000247
  - !!omap
    - id: ppt_e
    - name: phosphonic acid
    - compartment: C_e
    - charge: 0.0
    - formula: H3O3P
    - notes: !!omap
      - FORMULA: H3O3P
    - annotation: !!omap
      - biggr: ppt_e:0
      - chebi:
        - CHEBI:36361
        - CHEBI:44976
      - sbo: SBO:0000247
  - !!omap
    - id: ppbng_c
    - name: porphobilinogen(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C10H13N2O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C10H13N2O4
    - annotation: !!omap
      - biggr: ppbng_c:-1
      - biocyc: META:PORPHOBILINOGEN
      - chebi:
        - CHEBI:58126
      - hmdb: HMDB00245
      - inchikey: QSHWIQZFGQKFMA-UHFFFAOYSA-M
      - kegg.compound: C00931
      - metanetx.chemical: MNXM554
      - reactome: R-ALL-189464
      - sbo: SBO:0000247
      - seed.compound: cpd00689
  - !!omap
    - id: ppcoa_c
    - name: propionyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C24H36N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C24H36N7O17P3S
    - annotation: !!omap
      - biggr: ppcoa_c:-4
      - biocyc: META:PROPIONYL-COA
      - chebi:
        - CHEBI:57392
      - hmdb: HMDB01275
      - inchikey: QAQREVBBADEHPA-IEXPHMLFSA-J
      - kegg.compound: C00100
      - lipidmaps: LMFA07050364
      - metanetx.chemical: MNXM86
      - reactome:
        - R-ALL-192314
        - R-ALL-70843
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00086
        - cpd12196
  - !!omap
    - id: __iPKB_Clostridiaceae__ppgpp_c
    - name: Guanosine 3',5'-bis(diphosphate)
    - compartment: C_c
    - charge: 0.0
    - formula: C10H11N5O17P4
    - notes: !!omap
      - CHARGE: '-6.0'
      - FORMULA: C10H11N5O17P4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ppgpp_c:0
      - biocyc: META:GUANOSINE-5DP-3DP
      - chebi:
        - CHEBI:14376
        - CHEBI:14380
        - CHEBI:17633
        - CHEBI:24445
        - CHEBI:42747
        - CHEBI:5565
        - CHEBI:58215
        - CHEBI:77828
      - hmdb: HMDB59638
      - inchikey: BUFLLCUFNHESEH-UUOKFMHZSA-I
      - kegg.compound: C01228
      - metanetx.chemical: MNXM1189
      - sbo: SBO:0000247
      - seed.compound: cpd00905
  - !!omap
    - id: __iPKB_Clostridiaceae__pphn_c
    - name: Prephenate
    - compartment: C_c
    - charge: 0.0
    - formula: C10H8O6
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C10H8O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pphn_c:0
      - biocyc: META:PREPHENATE
      - chebi:
        - CHEBI:14884
        - CHEBI:16666
        - CHEBI:26256
        - CHEBI:26257
        - CHEBI:29934
        - CHEBI:45028
        - CHEBI:57852
        - CHEBI:8399
        - CHEBI:84387
      - hmdb: HMDB12283
      - inchikey: FPWMCUPFBRFMLH-XGAOUMNUSA-L
      - kegg.compound: C00254
      - metanetx.chemical: MNXM503
      - sbo: SBO:0000247
      - seed.compound: cpd00219
  - !!omap
    - id: ppi_c
    - name: diphosphate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: HO7P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: HO7P2
    - annotation: !!omap
      - biggr: ppi_c:-3
      - biocyc:
        - META:PPI
        - META:PYROPHOSPHATE-GROUP
      - chebi:
        - CHEBI:33019
      - hmdb: HMDB00250
      - inchikey: XPPKVPWEQAFLFU-UHFFFAOYSA-K
      - kegg.compound: C00013
      - metanetx.chemical: MNXM11
      - reactome:
        - R-ALL-111294
        - R-ALL-1132084
        - R-ALL-113541
        - R-ALL-113542
        - R-ALL-159450
        - R-ALL-2046049
        - R-ALL-389593
        - R-ALL-6806656
        - R-ALL-8878981
        - R-ALL-8938078
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00012
        - cpd27828
  - !!omap
    - id: ppp9_c
    - name: protoporphyrinate
    - compartment: C_c
    - charge: -2.0
    - formula: C34H32N4O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C34H32N4O4
    - annotation: !!omap
      - biggr: ppp9_c:-2
      - biocyc: META:PROTOPORPHYRIN_IX
      - chebi:
        - CHEBI:57306
        - CHEBI:36159
      - hmdb: HMDB00241
      - inchikey: KSFOVUSSGSKXFI-UJJXFSCMSA-L
      - kegg.compound: C02191
      - metanetx.chemical: MNXM346
      - reactome:
        - R-ALL-189463
        - R-ALL-189487
      - sbo: SBO:0000247
      - seed.compound: cpd01476
  - !!omap
    - id: pppg9_c
    - name: protoporphyrinogen(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C34H38N4O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C34H38N4O4
    - annotation: !!omap
      - biggr: pppg9_c:-2
      - biocyc: META:PROTOPORPHYRINOGEN
      - chebi:
        - CHEBI:57307
      - hmdb: HMDB01097
      - inchikey: UHSGPDMIQQYNAX-UHFFFAOYSA-L
      - kegg.compound: C01079
      - metanetx.chemical: MNXM351
      - reactome: R-ALL-189478
      - sbo: SBO:0000247
      - seed.compound: cpd00791
  - !!omap
    - id: __iPKB_Clostridiaceae__pppgpp_c
    - name: PppGpp
    - compartment: C_c
    - charge: 0.0
    - formula: C10H18N5O20P5
    - notes: !!omap
      - FORMULA: C10H18N5O20P5
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pppgpp_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__pppi_c
    - name: Inorganic triphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: HO10P3
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: HO10P3
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pppi_c:0
      - biocyc: META:P3I
      - chebi:
        - CHEBI:18036
        - CHEBI:29203
        - CHEBI:39942
        - CHEBI:39949
        - CHEBI:48313
        - CHEBI:48314
        - CHEBI:48315
        - CHEBI:48316
        - CHEBI:5926
        - CHEBI:9744
      - hmdb:
        - HMDB03379
        - HMDB12282
      - inchikey: UNXRWKVEANCORM-UHFFFAOYSA-I
      - kegg.compound: C00536
      - metanetx.chemical: MNXM332
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00421
        - cpd11672
  - !!omap
    - id: pram_c
    - name: 5-phospho-beta-D-ribosylaminium(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C5H11NO7P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C5H11NO7P
    - annotation: !!omap
      - biggr: pram_c:-1
      - biocyc: META:5-P-BETA-D-RIBOSYL-AMINE
      - chebi:
        - CHEBI:58681
      - hmdb:
        - HMDB01128
        - HMDB02347
        - HMDB62576
      - inchikey: SKCBPEVYGOQGJN-TXICZTDVSA-M
      - kegg.compound: C03090
      - metanetx.chemical: MNXM90003
      - reactome: R-ALL-111292
      - sbo: SBO:0000247
      - seed.compound: cpd01982
  - !!omap
    - id: pran_c
    - name: N-(5-phosphonato-beta-D-ribosyl)anthranilate
    - compartment: C_c
    - charge: -3.0
    - formula: C12H13NO9P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C12H13NO9P
    - annotation: !!omap
      - biggr: pran_c:-3
      - biocyc: META:N-5-PHOSPHORIBOSYL-ANTHRANILATE
      - chebi:
        - CHEBI:18277
      - inchikey: PMFMJXPRNJUYMB-GWOFURMSSA-K
      - kegg.compound: C04302
      - metanetx.chemical: MNXM1489
      - sbo: SBO:0000247
      - seed.compound: cpd02642
  - !!omap
    - id: __iPKB_Clostridiaceae__prbamp_c
    - name: 1-(5-Phosphoribosyl)-AMP
    - compartment: C_c
    - charge: 0.0
    - formula: C15H19N5O14P2
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C15H19N5O14P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__prbamp_c:0
      - biocyc: META:PHOSPHORIBOSYL-AMP
      - chebi:
        - CHEBI:11195
        - CHEBI:18374
        - CHEBI:20628
        - CHEBI:37522
        - CHEBI:59457
        - CHEBI:7354
        - CHEBI:8166
      - hmdb: HMDB12276
      - inchikey: RTQMRTSPTLIIHM-KEOHHSTQSA-J
      - kegg.compound: C02741
      - metanetx.chemical: MNXM1515
      - sbo: SBO:0000247
      - seed.compound: cpd01777
  - !!omap
    - id: __iPKB_Clostridiaceae__prbatp_c
    - name: 1-(5-Phosphoribosyl)-ATP
    - compartment: C_c
    - charge: 0.0
    - formula: C15H19N5O20P4
    - notes: !!omap
      - CHARGE: '-6.0'
      - FORMULA: C15H19N5O20P4
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__prbatp_c:0
      - biocyc: META:PHOSPHORIBOSYL-ATP
      - chebi:
        - CHEBI:11192
        - CHEBI:11196
        - CHEBI:18263
        - CHEBI:18970
        - CHEBI:58424
        - CHEBI:59460
        - CHEBI:73183
        - CHEBI:73200
        - CHEBI:8167
      - hmdb: HMDB03665
      - inchikey: RKNHJBVBFHDXGR-KEOHHSTQSA-H
      - kegg.compound: C02739
      - metanetx.chemical: MNXM1351
      - sbo: SBO:0000247
      - seed.compound: cpd01775
  - !!omap
    - id: prfp_c
    - name: 
        1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamide(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C15H21N5O15P2
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C15H21N5O15P2
    - annotation: !!omap
      - biggr: prfp_c:-4
      - biocyc: META:PHOSPHORIBOSYL-FORMIMINO-AICAR-P
      - chebi:
        - CHEBI:58435
      - hmdb: HMDB12277
      - inchikey: QOUSHGMTBIIAHR-KEOHHSTQSA-J
      - kegg.compound: C04896
      - metanetx.chemical: MNXM1397
      - sbo: SBO:0000247
      - seed.compound: cpd02979
  - !!omap
    - id: prlp_c
    - name: 
        5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C15H21N5O15P2
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C15H21N5O15P2
    - annotation: !!omap
      - biggr: prlp_c:-4
      - biocyc: META:PHOSPHORIBULOSYL-FORMIMINO-AICAR-P
      - chebi:
        - CHEBI:58525
      - inchikey: BLKFNHOCHNCLII-GHVQHMAVSA-J
      - kegg.compound: C04916
      - metanetx.chemical: MNXM1408
      - sbo: SBO:0000247
      - seed.compound: cpd02991
  - !!omap
    - id: pro__L_c
    - name: L-proline zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO2
    - annotation: !!omap
      - biggr: pro__L_c:0
      - biocyc: META:PRO
      - chebi:
        - CHEBI:60039
        - CHEBI:17203
      - hmdb: HMDB00162
      - inchikey: ONIBWKKTOPOVIA-BYPYZUCNSA-N
      - kegg.compound:
        - C00148
        - C16435
      - kegg.drug: D00035
      - metanetx.chemical: MNXM114
      - reactome:
        - R-ALL-113538
        - R-ALL-352033
        - R-ALL-379717
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00129
        - cpd15140
  - !!omap
    - id: pro__L_e
    - name: L-proline zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C5H9NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H9NO2
    - annotation: !!omap
      - biggr: pro__L_e:0
      - biocyc: META:PRO
      - chebi:
        - CHEBI:60039
        - CHEBI:17203
      - hmdb: HMDB00162
      - inchikey: ONIBWKKTOPOVIA-BYPYZUCNSA-N
      - kegg.compound:
        - C00148
        - C16435
      - kegg.drug: D00035
      - metanetx.chemical: MNXM114
      - reactome:
        - R-ALL-113538
        - R-ALL-352033
        - R-ALL-379717
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00129
        - cpd15140
  - !!omap
    - id: progly_c
    - name: L-prolylglycine
    - compartment: C_c
    - charge: 0.0
    - formula: C7H12N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H12N2O3
    - annotation: !!omap
      - biggr: progly_c:0
      - biocyc: META:CPD0-2182
      - chebi:
        - CHEBI:61696
        - CHEBI:61695
      - inchikey: RNKSNIBMTUYWSH-YFKPBYRVSA-N
      - metanetx.chemical: MNXM7481
      - sbo: SBO:0000247
      - seed.compound: cpd15551
  - !!omap
    - id: progly_e
    - name: L-prolylglycine
    - compartment: C_e
    - charge: 0.0
    - formula: C7H12N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H12N2O3
    - annotation: !!omap
      - biggr: progly_e:0
      - biocyc: META:CPD0-2182
      - chebi:
        - CHEBI:61696
        - CHEBI:61695
      - inchikey: RNKSNIBMTUYWSH-YFKPBYRVSA-N
      - metanetx.chemical: MNXM7481
      - sbo: SBO:0000247
      - seed.compound: cpd15551
  - !!omap
    - id: progly_p
    - name: L-prolylglycine
    - compartment: C_p
    - charge: 0.0
    - formula: C7H12N2O3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C7H12N2O3
    - annotation: !!omap
      - biggr: progly_p:0
      - biocyc: META:CPD0-2182
      - chebi:
        - CHEBI:61696
        - CHEBI:61695
      - inchikey: RNKSNIBMTUYWSH-YFKPBYRVSA-N
      - metanetx.chemical: MNXM7481
      - sbo: SBO:0000247
      - seed.compound: cpd15551
  - !!omap
    - id: __iPKB_Clostridiaceae__prohisglu_c
    - name: Proline-histidine-glutamine tripeptide
    - compartment: C_c
    - charge: 0.0
    - formula: C16H24N5O7
    - notes: !!omap
      - FORMULA: C16H24N5O7
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__prohisglu_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__prohisglu_e
    - name: Proline-histidine-glutamine tripeptide
    - compartment: C_e
    - charge: 0.0
    - formula: C16H24N5O7
    - notes: !!omap
      - FORMULA: C16H24N5O7
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__prohisglu_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: prpp_c
    - name: 5-O-phosphonato-alpha-D-ribofuranosyl diphosphate(5-)
    - compartment: C_c
    - charge: -5.0
    - formula: C5H8O14P3
    - notes: !!omap
      - CHARGE: '-5'
      - FORMULA: C5H8O14P3
    - annotation: !!omap
      - biggr: prpp_c:-5
      - biocyc: META:PRPP
      - chebi:
        - CHEBI:58017
      - hmdb:
        - HMDB00280
        - HMDB62643
      - inchikey: PQGCEDQWHSBAJP-TXICZTDVSA-I
      - kegg.compound: C00119
      - metanetx.chemical: MNXM91
      - reactome: R-ALL-73566
      - sbo: SBO:0000247
      - seed.compound: cpd00103
  - !!omap
    - id: psd5p_c
    - name: pseudouridine 5'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H11N2O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H11N2O9P
    - annotation: !!omap
      - biggr: psd5p_c:-2
      - chebi:
        - CHEBI:58380
      - metanetx.chemical: MNXM148492
      - sbo: SBO:0000247
  - !!omap
    - id: pser_c
    - name: O-phosphonato-L-serine(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C3H6NO6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C3H6NO6P
    - annotation: !!omap
      - biggr: pser_c:-2
      - biocyc: META:3-P-SERINE
      - chebi:
        - CHEBI:57524
      - hmdb: HMDB00272
      - inchikey: BZQFBWGGLXLEPQ-REOHCLBHSA-L
      - kegg.compound: C01005
      - metanetx.chemical: MNXM379
      - reactome: R-ALL-936706
      - sbo: SBO:0000247
      - seed.compound: cpd00738
  - !!omap
    - id: ptrc_c
    - name: 1,4-butanediammonium
    - compartment: C_c
    - charge: 2.0
    - formula: C4H14N2
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: C4H14N2
    - annotation: !!omap
      - biggr: ptrc_c:2
      - biocyc: META:PUTRESCINE
      - chebi:
        - CHEBI:326268
      - hmdb:
        - HMDB01414
        - HMDB60243
      - inchikey: KIDHWZJUCRJVML-UHFFFAOYSA-P
      - kegg.compound: C00134
      - metanetx.chemical: MNXM118
      - reactome:
        - R-ALL-141350
        - R-ALL-29610
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00118
        - cpd12215
  - !!omap
    - id: ptrc_e
    - name: 1,4-butanediammonium
    - compartment: C_e
    - charge: 2.0
    - formula: C4H14N2
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: C4H14N2
    - annotation: !!omap
      - biggr: ptrc_e:2
      - biocyc: META:PUTRESCINE
      - chebi:
        - CHEBI:326268
      - hmdb:
        - HMDB01414
        - HMDB60243
      - inchikey: KIDHWZJUCRJVML-UHFFFAOYSA-P
      - kegg.compound: C00134
      - metanetx.chemical: MNXM118
      - reactome:
        - R-ALL-141350
        - R-ALL-29610
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00118
        - cpd12215
  - !!omap
    - id: pydx5p_c
    - name: pyridoxal 5'-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C8H8NO6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C8H8NO6P
    - annotation: !!omap
      - biggr: pydx5p_c:-2
      - biocyc: META:PYRIDOXAL_PHOSPHATE
      - chebi:
        - CHEBI:597326
      - hmdb: HMDB01491
      - inchikey: NGVDGCNFYWLIFO-UHFFFAOYSA-L
      - kegg.compound: C00018
      - metanetx.chemical: MNXM161
      - reactome: R-ALL-29390
      - sbo: SBO:0000247
      - seed.compound: cpd00016
  - !!omap
    - id: __iPKB_Clostridiaceae__pyovd_kt_e
    - name: Pyoverdine  P putida specific
    - compartment: C_e
    - charge: 0.0
    - formula: C27H48N10O15
    - notes: !!omap
      - FORMULA: C27H48N10O15
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__pyovd_kt_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: pyr_c
    - name: pyruvate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H3O3
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H3O3
    - annotation: !!omap
      - biggr: pyr_c:-1
      - biocyc: META:PYRUVATE
      - chebi:
        - CHEBI:15361
      - hmdb: HMDB00243
      - inchikey: LCTONWCANYUPML-UHFFFAOYSA-M
      - kegg.compound: C00022
      - lipidmaps: LMFA01060077
      - metanetx.chemical: MNXM23
      - reactome:
        - R-ALL-1130930
        - R-ALL-113557
        - R-ALL-29398
        - R-ALL-389680
        - R-ALL-5357717
      - sbo: SBO:0000247
      - seed.compound: cpd00020
  - !!omap
    - id: q8_c
    - name: ubiquinone-8
    - compartment: C_c
    - charge: 0.0
    - formula: C49H74O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C49H74O4
    - annotation: !!omap
      - biggr: q8_c:0
      - biocyc: META:UBIQUINONE-8
      - chebi:
        - CHEBI:61683
      - inchikey: ICFIZJQGJAJRSU-SGHXUWJISA-N
      - kegg.compound: C17569
      - lipidmaps: LMPR02010005
      - metanetx.chemical: MNXM232
      - sbo: SBO:0000247
      - seed.compound: cpd15560
  - !!omap
    - id: q8h2_c
    - name: ubiquinol-8
    - compartment: C_c
    - charge: 0.0
    - formula: C49H76O4
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C49H76O4
    - annotation: !!omap
      - biggr: q8h2_c:0
      - biocyc: META:CPD-9956
      - chebi:
        - CHEBI:61682
      - hmdb: HMDB01060
      - inchikey: LOJUQFSPYHMHEO-SGHXUWJISA-N
      - metanetx.chemical: MNXM191
      - sbo: SBO:0000247
      - seed.compound:
        - cpd15561
        - cpd29608
  - !!omap
    - id: quln_c
    - name: quinolinate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H3NO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H3NO4
    - annotation: !!omap
      - biggr: quln_c:-2
      - biocyc: META:QUINOLINATE
      - chebi:
        - CHEBI:29959
      - hmdb: HMDB00232
      - inchikey: GJAWHXHKYYXBSV-UHFFFAOYSA-L
      - kegg.compound: C03722
      - metanetx.chemical: MNXM555
      - reactome: R-ALL-197238
      - sbo: SBO:0000247
      - seed.compound: cpd02333
  - !!omap
    - id: r1p_c
    - name: alpha-D-ribose 1-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O8P
    - annotation: !!omap
      - biggr: r1p_c:-2
      - biocyc: META:RIBOSE-1P
      - chebi:
        - CHEBI:57720
      - hmdb: HMDB01489
      - inchikey: YXJDFQJKERBOBM-TXICZTDVSA-L
      - kegg.compound: C00620
      - metanetx.chemical: MNXM295
      - reactome: R-ALL-112016
      - sbo: SBO:0000247
      - seed.compound: cpd00475
  - !!omap
    - id: __iPKB_Clostridiaceae__r5p_c
    - name: Alpha-D-Ribose 5-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C5H9O8P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C5H9O8P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__r5p_c:0
      - biocyc: META:CPD-15318
      - chebi:
        - CHEBI:10270
        - CHEBI:12331
        - CHEBI:18189
        - CHEBI:22413
      - inchikey: KTVPXOYAKDPRHY-AIHAYLRMSA-L
      - kegg.compound: C03736
      - metanetx.chemical: MNXM15900
      - sbo: SBO:0000247
      - seed.compound: cpd19028
  - !!omap
    - id: raffin_c
    - name: raffinose
    - compartment: C_c
    - charge: 0.0
    - formula: C18H32O16
    - notes: !!omap
      - FORMULA: C18H32O16
    - annotation: !!omap
      - biggr: raffin_c:0
      - biocyc: META:CPD-1099
      - chebi:
        - CHEBI:16634
      - hmdb: HMDB03213
      - inchikey: MUPFEKGTMRGPLJ-ZQSKZDJDSA-N
      - kegg.compound: C00492
      - kegg.glycan: G00249
      - metanetx.chemical: MNXM621
      - sbo: SBO:0000247
      - seed.compound: cpd00382
  - !!omap
    - id: raffin_e
    - name: raffinose
    - compartment: C_e
    - charge: 0.0
    - formula: C18H32O16
    - notes: !!omap
      - FORMULA: C18H32O16
    - annotation: !!omap
      - biggr: raffin_e:0
      - biocyc: META:CPD-1099
      - chebi:
        - CHEBI:16634
      - hmdb: HMDB03213
      - inchikey: MUPFEKGTMRGPLJ-ZQSKZDJDSA-N
      - kegg.compound: C00492
      - kegg.glycan: G00249
      - metanetx.chemical: MNXM621
      - sbo: SBO:0000247
      - seed.compound: cpd00382
  - !!omap
    - id: rhcys_c
    - name: S-(5-deoxy-D-ribos-5-yl)-L-homocysteine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H17NO6S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H17NO6S
    - annotation: !!omap
      - biggr: rhcys_c:0
      - biocyc: META:CPD-564
      - chebi:
        - CHEBI:58195
        - CHEBI:17575
      - inchikey: IQFWYNFDWRYSRA-BLELIYKESA-N
      - kegg.compound: C03539
      - metanetx.chemical: MNXM1777
      - sbo: SBO:0000247
      - seed.compound: cpd02227
  - !!omap
    - id: rib__D_c
    - name: D-ribofuranose
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: rib__D_c:0
      - biocyc:
        - META:D-Ribofuranose
        - META:D-Ribopyranose
      - chebi:
        - CHEBI:47013
      - hmdb: HMDB00283
      - inchikey: HMFHBZSHGGEWLO-SOOFDHNKSA-N
      - kegg.compound:
        - C00121
        - C21057
      - metanetx.chemical: MNXM242
      - sbo: SBO:0000247
      - seed.compound: cpd00105
  - !!omap
    - id: rib__D_e
    - name: D-ribofuranose
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: rib__D_e:0
      - biocyc:
        - META:D-Ribofuranose
        - META:D-Ribopyranose
      - chebi:
        - CHEBI:47013
      - hmdb: HMDB00283
      - inchikey: HMFHBZSHGGEWLO-SOOFDHNKSA-N
      - kegg.compound:
        - C00121
        - C21057
      - metanetx.chemical: MNXM242
      - sbo: SBO:0000247
      - seed.compound: cpd00105
  - !!omap
    - id: __iPKB_Clostridiaceae__ribflv_c
    - name: Riboflavin C17H20N4O6
    - compartment: C_c
    - charge: 0.0
    - formula: C17H22N4O6
    - notes: !!omap
      - CHARGE: '2.0'
      - FORMULA: C17H22N4O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ribflv_c:0
      - biocyc: META:RIBOFLAVIN
      - chebi:
        - CHEBI:15044
        - CHEBI:17015
        - CHEBI:27299
        - CHEBI:45214
        - CHEBI:529204
        - CHEBI:57986
        - CHEBI:8843
      - hmdb: HMDB00244
      - inchikey: AUNGANRZJHBGPY-SCRDCRAPSA-M
      - kegg.compound: C00255
      - kegg.drug: D00050
      - metanetx.chemical: MNXM270
      - reactome:
        - R-ALL-196931
        - R-ALL-3165253
      - sbo: SBO:0000247
      - seed.compound: cpd00220
  - !!omap
    - id: __iPKB_Clostridiaceae__ribflv_e
    - name: Riboflavin C17H20N4O6
    - compartment: C_e
    - charge: 0.0
    - formula: C17H22N4O6
    - notes: !!omap
      - CHARGE: '2.0'
      - FORMULA: C17H22N4O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ribflv_e:0
      - biocyc: META:RIBOFLAVIN
      - chebi:
        - CHEBI:15044
        - CHEBI:17015
        - CHEBI:27299
        - CHEBI:45214
        - CHEBI:529204
        - CHEBI:57986
        - CHEBI:8843
      - hmdb: HMDB00244
      - inchikey: AUNGANRZJHBGPY-SCRDCRAPSA-M
      - kegg.compound: C00255
      - kegg.drug: D00050
      - metanetx.chemical: MNXM270
      - reactome:
        - R-ALL-196931
        - R-ALL-3165253
      - sbo: SBO:0000247
      - seed.compound: cpd00220
  - !!omap
    - id: rnam_c
    - name: N-ribosylnicotinamide
    - compartment: C_c
    - charge: 1.0
    - formula: C11H15N2O5
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C11H15N2O5
    - annotation: !!omap
      - biggr: rnam_c:1
      - biocyc: META:NICOTINAMIDE_RIBOSE
      - chebi:
        - CHEBI:15927
      - hmdb: HMDB00855
      - inchikey: JLEBZPBDRKPWTD-TURQNECASA-O
      - kegg.compound: C03150
      - metanetx.chemical: MNXM1115
      - reactome:
        - R-ALL-8869377
        - R-ALL-8936514
        - R-ALL-8940077
      - sbo: SBO:0000247
      - seed.compound: cpd02016
  - !!omap
    - id: ru5p__D_c
    - name: D-ribulose 5-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O8P
    - annotation: !!omap
      - biggr: ru5p__D_c:-2
      - biocyc: META:RIBULOSE-5P
      - chebi:
        - CHEBI:58121
      - hmdb:
        - HMDB00618
        - HMDB02033
        - HMDB02694
      - inchikey: FNZLKVNUWIIPSJ-UHNVWZDZSA-L
      - kegg.compound: C00199
      - metanetx.chemical: MNXM145
      - reactome: R-ALL-29732
      - sbo: SBO:0000247
      - seed.compound: cpd00171
  - !!omap
    - id: ru5p__L_c
    - name: L-ribulose 5-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O8P
    - annotation: !!omap
      - biggr: ru5p__L_c:-2
      - biocyc: META:L-RIBULOSE-5-P
      - chebi:
        - CHEBI:58226
      - inchikey: FNZLKVNUWIIPSJ-CRCLSJGQSA-L
      - kegg.compound: C01101
      - metanetx.chemical: MNXM901
      - sbo: SBO:0000247
      - seed.compound: cpd00808
  - !!omap
    - id: __iPKB_Clostridiaceae__s17bp_c
    - name: Sedoheptulose 1,7-bisphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C7H12O13P2
    - notes: !!omap
      - FORMULA: C7H12O13P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__s17bp_c:0
      - biocyc: META:D-SEDOHEPTULOSE-1-7-P2
      - chebi:
        - CHEBI:15072
        - CHEBI:17969
        - CHEBI:26620
        - CHEBI:58335
        - CHEBI:9081
      - hmdb: HMDB60274
      - inchikey: OKHXOUGRECCASI-SHUUEZRQSA-J
      - kegg.compound: C00447
      - metanetx.chemical: MNXM1294
      - sbo: SBO:0000247
      - seed.compound: cpd00349
  - !!omap
    - id: s7p_c
    - name: sedoheptulose 7-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H13O10P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H13O10P
    - annotation: !!omap
      - biggr: s7p_c:-2
      - biocyc: META:D-SEDOHEPTULOSE-7-P
      - chebi:
        - CHEBI:57483
      - hmdb:
        - HMDB01068
        - HMDB62754
      - inchikey: JDTUMPKOJBQPKX-GBNDHIKLSA-L
      - kegg.compound: C05382
      - metanetx.chemical: MNXM271
      - reactome: R-ALL-29882
      - sbo: SBO:0000247
      - seed.compound: cpd00238
  - !!omap
    - id: s_c
    - name: sulfur atom
    - compartment: C_c
    - charge: 0.0
    - formula: S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: S
    - annotation: !!omap
      - biggr: s_c:0
      - biocyc: META:Elemental-Sulfur
      - chebi:
        - CHEBI:26833
      - inchikey: NINIDFKCEFEMDL-UHFFFAOYSA-N
      - kegg.compound: C00087
      - kegg.drug: D00024
      - metanetx.chemical: MNXM89
      - sbo: SBO:0000247
  - !!omap
    - id: s_e
    - name: sulfur atom
    - compartment: C_e
    - charge: 0.0
    - formula: S
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: S
    - annotation: !!omap
      - biggr: s_e:0
      - biocyc: META:Elemental-Sulfur
      - chebi:
        - CHEBI:26833
      - inchikey: NINIDFKCEFEMDL-UHFFFAOYSA-N
      - kegg.compound: C00087
      - kegg.drug: D00024
      - metanetx.chemical: MNXM89
      - sbo: SBO:0000247
  - !!omap
    - id: salcn6p_c
    - name: salicin-6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C13H17O10P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C13H17O10P
    - annotation: !!omap
      - biggr: salcn6p_c:-2
      - biocyc: META:CPD-1181
      - chebi:
        - CHEBI:64794
      - inchikey: FSJKOMDYZYBBLV-UJPOAAIJSA-L
      - kegg.compound: C06188
      - metanetx.chemical: MNXM3356
      - sbo: SBO:0000247
      - seed.compound: cpd03698
  - !!omap
    - id: salcn_e
    - name: salicin
    - compartment: C_e
    - charge: 0.0
    - formula: C13H18O7
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C13H18O7
    - annotation: !!omap
      - biggr: salcn_e:0
      - biocyc: META:CPD-1142
      - chebi:
        - CHEBI:17814
      - hmdb: HMDB03546
      - inchikey: NGFMICBWJRZIBI-UJPOAAIJSA-N
      - kegg.compound: C01451
      - metanetx.chemical: MNXM2561
      - sbo: SBO:0000247
      - seed.compound: cpd01030
  - !!omap
    - id: __iPKB_Clostridiaceae__sbt6p_c
    - name: D-Sorbitol 6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H13O9P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C6H13O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__sbt6p_c:0
      - biocyc: META:D-SORBITOL-6-P
      - chebi:
        - CHEBI:13021
        - CHEBI:15094
        - CHEBI:17044
        - CHEBI:17116
        - CHEBI:21093
        - CHEBI:4247
        - CHEBI:45426
        - CHEBI:60084
        - CHEBI:9202
      - inchikey: GACTWZZMVMUKNG-SLPGGIOYSA-L
      - kegg.compound: C01096
      - metanetx.chemical: MNXM393
      - sbo: SBO:0000247
      - seed.compound: cpd00804
  - !!omap
    - id: sbt__D_c
    - name: D-glucitol
    - compartment: C_c
    - charge: 0.0
    - formula: C6H14O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H14O6
    - annotation: !!omap
      - biggr: sbt__D_c:0
      - biocyc: META:SORBITOL
      - chebi:
        - CHEBI:17924
      - hmdb: HMDB00247
      - inchikey: FBPFZTCFMRRESA-JGWLITMVSA-N
      - kegg.compound: C00794
      - kegg.drug: D00096
      - metanetx.chemical: MNXM469
      - reactome: R-ALL-5652213
      - sbo: SBO:0000247
      - seed.compound: cpd00588
  - !!omap
    - id: sbt__D_e
    - name: D-glucitol
    - compartment: C_e
    - charge: 0.0
    - formula: C6H14O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C6H14O6
    - annotation: !!omap
      - biggr: sbt__D_e:0
      - biocyc: META:SORBITOL
      - chebi:
        - CHEBI:17924
      - hmdb: HMDB00247
      - inchikey: FBPFZTCFMRRESA-JGWLITMVSA-N
      - kegg.compound: C00794
      - kegg.drug: D00096
      - metanetx.chemical: MNXM469
      - reactome: R-ALL-5652213
      - sbo: SBO:0000247
      - seed.compound: cpd00588
  - !!omap
    - id: __iPKB_Clostridiaceae__sbzcoa_c
    - name: O-Succinylbenzoyl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C32H39N7O20P3S
    - notes: !!omap
      - CHARGE: '-5.0'
      - FORMULA: C32H39N7O20P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__sbzcoa_c:0
      - biocyc: META:CPD-6972
      - chebi:
        - CHEBI:12700
        - CHEBI:1279
        - CHEBI:12836
        - CHEBI:15509
        - CHEBI:19779
        - CHEBI:57364
      - inchikey: AVOVYFCDODUXLY-HSJNEKGZSA-I
      - kegg.compound: C03160
      - metanetx.chemical: MNXM1132
      - sbo: SBO:0000247
      - seed.compound: cpd02021
  - !!omap
    - id: __iPKB_Clostridiaceae__scl_c
    - name: Sirohydrochlorin
    - compartment: C_c
    - charge: 0.0
    - formula: C42H39N4O16
    - notes: !!omap
      - CHARGE: '-7.0'
      - FORMULA: C42H39N4O16
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__scl_c:0
      - biocyc: META:SIROHYDROCHLORIN
      - chebi:
        - CHEBI:15090
        - CHEBI:18023
        - CHEBI:26691
        - CHEBI:58351
        - CHEBI:9167
      - inchikey: KWIZRXMMFRBUML-AHGFGAHVSA-F
      - kegg.compound: C05778
      - metanetx.chemical: MNXM863
      - sbo: SBO:0000247
      - seed.compound: cpd03426
  - !!omap
    - id: sel_c
    - name: selenate
    - compartment: C_c
    - charge: -2.0
    - formula: O4Se
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O4Se
    - annotation: !!omap
      - biggr: sel_c:-2
      - biocyc: META:SELENATE
      - chebi:
        - CHEBI:15075
      - hmdb: HMDB62761
      - inchikey: QYHFIVBSNOWOCQ-UHFFFAOYSA-L
      - kegg.compound: C05697
      - metanetx.chemical: MNXM2282
      - reactome: R-ALL-5357662
      - sbo: SBO:0000247
      - seed.compound: cpd03396
  - !!omap
    - id: sel_e
    - name: selenate
    - compartment: C_e
    - charge: -2.0
    - formula: O4Se
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O4Se
    - annotation: !!omap
      - biggr: sel_e:-2
      - biocyc: META:SELENATE
      - chebi:
        - CHEBI:15075
      - hmdb: HMDB62761
      - inchikey: QYHFIVBSNOWOCQ-UHFFFAOYSA-L
      - kegg.compound: C05697
      - metanetx.chemical: MNXM2282
      - reactome: R-ALL-5357662
      - sbo: SBO:0000247
      - seed.compound: cpd03396
  - !!omap
    - id: sel_p
    - name: selenate
    - compartment: C_p
    - charge: -2.0
    - formula: O4Se
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O4Se
    - annotation: !!omap
      - biggr: sel_p:-2
      - biocyc: META:SELENATE
      - chebi:
        - CHEBI:15075
      - hmdb: HMDB62761
      - inchikey: QYHFIVBSNOWOCQ-UHFFFAOYSA-L
      - kegg.compound: C05697
      - metanetx.chemical: MNXM2282
      - reactome: R-ALL-5357662
      - sbo: SBO:0000247
      - seed.compound: cpd03396
  - !!omap
    - id: ser__D_c
    - name: D-serine
    - compartment: C_c
    - charge: 0.0
    - formula: C3H7NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO3
    - annotation: !!omap
      - biggr: ser__D_c:0
      - biocyc: META:D-SERINE
      - chebi:
        - CHEBI:35247
        - CHEBI:16523
      - hmdb: HMDB03406
      - inchikey: MTCFGRXMJLQNBG-UWTATZPHSA-N
      - kegg.compound: C00740
      - metanetx.chemical: MNXM694
      - sbo: SBO:0000247
      - seed.compound: cpd00550
  - !!omap
    - id: ser__D_e
    - name: D-serine
    - compartment: C_e
    - charge: 0.0
    - formula: C3H7NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO3
    - annotation: !!omap
      - biggr: ser__D_e:0
      - biocyc: META:D-SERINE
      - chebi:
        - CHEBI:35247
        - CHEBI:16523
      - hmdb: HMDB03406
      - inchikey: MTCFGRXMJLQNBG-UWTATZPHSA-N
      - kegg.compound: C00740
      - metanetx.chemical: MNXM694
      - sbo: SBO:0000247
      - seed.compound: cpd00550
  - !!omap
    - id: ser__L_c
    - name: L-serine
    - compartment: C_c
    - charge: 0.0
    - formula: C3H7NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO3
    - annotation: !!omap
      - biggr: ser__L_c:0
      - biocyc:
        - META:SER
        - META:Serines
      - chebi:
        - CHEBI:33384
        - CHEBI:17115
      - hmdb:
        - HMDB00187
        - HMDB00589
        - HMDB62263
      - inchikey: MTCFGRXMJLQNBG-REOHCLBHSA-N
      - kegg.compound:
        - C00065
        - C00716
      - kegg.drug: D00016
      - lipidmaps: LMFA01100045
      - metanetx.chemical: MNXM53
      - reactome:
        - R-ALL-200736
        - R-ALL-352002
        - R-ALL-379732
        - R-ALL-8932979
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00054
        - cpd28171
        - cpd30743
  - !!omap
    - id: ser__L_e
    - name: L-serine
    - compartment: C_e
    - charge: 0.0
    - formula: C3H7NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C3H7NO3
    - annotation: !!omap
      - biggr: ser__L_e:0
      - biocyc:
        - META:SER
        - META:Serines
      - chebi:
        - CHEBI:33384
        - CHEBI:17115
      - hmdb:
        - HMDB00187
        - HMDB00589
        - HMDB62263
      - inchikey: MTCFGRXMJLQNBG-REOHCLBHSA-N
      - kegg.compound:
        - C00065
        - C00716
      - kegg.drug: D00016
      - lipidmaps: LMFA01100045
      - metanetx.chemical: MNXM53
      - reactome:
        - R-ALL-200736
        - R-ALL-352002
        - R-ALL-379732
        - R-ALL-8932979
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00054
        - cpd28171
        - cpd30743
  - !!omap
    - id: __iPKB_Clostridiaceae__serglugly_c
    - name: Serine-glutamine-glycine tripeptide
    - compartment: C_c
    - charge: 0.0
    - formula: C10H18N3O8
    - notes: !!omap
      - FORMULA: C10H18N3O8
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__serglugly_c:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__serglugly_e
    - name: Serine-glutamine-glycine tripeptide
    - compartment: C_e
    - charge: 0.0
    - formula: C10H18N3O8
    - notes: !!omap
      - FORMULA: C10H18N3O8
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__serglugly_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: sheme_c
    - name: siroheme(8-)
    - compartment: C_c
    - charge: -8.0
    - formula: C42H36FeN4O16
    - notes: !!omap
      - CHARGE: '-8'
      - FORMULA: C42H36FeN4O16
    - annotation: !!omap
      - biggr: sheme_c:-8
      - biocyc: META:SIROHEME
      - chebi:
        - CHEBI:60052
      - inchikey: DLKSSIHHLYNIKN-QIISWYHFSA-D
      - kegg.compound: C00748
      - metanetx.chemical: MNXM82173
      - sbo: SBO:0000247
      - seed.compound: cpd00557
  - !!omap
    - id: skm5p_c
    - name: 3-phosphonatoshikimate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C7H8O8P
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C7H8O8P
    - annotation: !!omap
      - biggr: skm5p_c:-3
      - biocyc: META:SHIKIMATE-5P
      - chebi:
        - CHEBI:145989
      - inchikey: QYOJSKGCWNAKGW-PBXRRBTRSA-K
      - kegg.compound: C03175
      - metanetx.chemical: MNXM1265
      - reactome: R-ALL-964859
      - sbo: SBO:0000247
      - seed.compound: cpd02030
  - !!omap
    - id: skm_c
    - name: shikimate
    - compartment: C_c
    - charge: -1.0
    - formula: C7H9O5
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C7H9O5
    - annotation: !!omap
      - biggr: skm_c:-1
      - biocyc: META:SHIKIMATE
      - chebi:
        - CHEBI:36208
      - hmdb: HMDB03070
      - inchikey: JXOHGGNKMLTUBP-HSUXUTPPSA-M
      - kegg.compound: C00493
      - metanetx.chemical: MNXM602
      - reactome: R-ALL-964932
      - sbo: SBO:0000247
      - seed.compound: cpd00383
  - !!omap
    - id: sl26da_c
    - name: N-(3-carboxylatopropionyl)-LL-2,6-diaminopimelate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C11H16N2O7
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C11H16N2O7
    - annotation: !!omap
      - biggr: sl26da_c:-2
      - biocyc: META:N-SUCCINYLLL-2-6-DIAMINOPIMELATE
      - chebi:
        - CHEBI:58087
      - hmdb: HMDB12267
      - inchikey: GLXUWZBUPATPBR-BQBZGAKWSA-L
      - kegg.compound: C04421
      - metanetx.chemical: MNXM1488
      - sbo: SBO:0000247
      - seed.compound: cpd02698
  - !!omap
    - id: sl2a6o_c
    - name: L-2-succinylamino-6-oxoheptanedioate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C11H12NO8
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C11H12NO8
    - annotation: !!omap
      - biggr: sl2a6o_c:-3
      - biocyc: META:N-SUCCINYL-2-AMINO-6-KETOPIMELATE
      - chebi:
        - CHEBI:15685
      - hmdb: HMDB12266
      - inchikey: SDVXSCSNVVZWDD-LURJTMIESA-K
      - kegg.compound: C04462
      - metanetx.chemical: MNXM1563
      - sbo: SBO:0000247
      - seed.compound: cpd02724
  - !!omap
    - id: slnt_c
    - name: selenite(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: O3Se
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O3Se
    - annotation: !!omap
      - biggr: slnt_c:-2
      - biocyc: META:SELENITE
      - chebi:
        - CHEBI:18212
      - hmdb: HMDB11119
      - inchikey: MCAHWIHFGHIESP-UHFFFAOYSA-L
      - kegg.compound: C05684
      - kegg.drug: D05814
      - metanetx.chemical: MNXM1157
      - reactome: R-ALL-5357720
      - sbo: SBO:0000247
      - seed.compound: cpd03387
  - !!omap
    - id: slnt_e
    - name: selenite(2-)
    - compartment: C_e
    - charge: -2.0
    - formula: O3Se
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O3Se
    - annotation: !!omap
      - biggr: slnt_e:-2
      - biocyc: META:SELENITE
      - chebi:
        - CHEBI:18212
      - hmdb: HMDB11119
      - inchikey: MCAHWIHFGHIESP-UHFFFAOYSA-L
      - kegg.compound: C05684
      - kegg.drug: D05814
      - metanetx.chemical: MNXM1157
      - reactome: R-ALL-5357720
      - sbo: SBO:0000247
      - seed.compound: cpd03387
  - !!omap
    - id: so3_c
    - name: sulfite
    - compartment: C_c
    - charge: -2.0
    - formula: O3S
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O3S
    - annotation: !!omap
      - biggr: so3_c:-2
      - biocyc:
        - META:H2SO3
        - META:HSO3
        - META:SO3
      - chebi:
        - CHEBI:17359
      - hmdb:
        - HMDB00240
        - HMDB01033
        - HMDB03008
        - HMDB34829
      - inchikey: LSNNMFCWUKXFEE-UHFFFAOYSA-L
      - kegg.compound:
        - C00094
        - C11481
      - metanetx.chemical: MNXM105630
      - sbo: SBO:0000247
      - seed.compound: cpd00081
  - !!omap
    - id: so4_c
    - name: sulfate
    - compartment: C_c
    - charge: -2.0
    - formula: O4S
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O4S
    - annotation: !!omap
      - biggr: so4_c:-2
      - biocyc:
        - META:HSO4
        - META:SULFATE
      - chebi:
        - CHEBI:16189
      - hmdb: HMDB01448
      - inchikey: QAOWNCQODCNURD-UHFFFAOYSA-L
      - kegg.compound: C00059
      - kegg.drug: D05963
      - metanetx.chemical: MNXM58
      - reactome:
        - R-ALL-1606845
        - R-ALL-1609649
        - R-ALL-1614584
        - R-ALL-174375
        - R-ALL-427648
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00048
        - cpd29301
  - !!omap
    - id: so4_e
    - name: sulfate
    - compartment: C_e
    - charge: -2.0
    - formula: O4S
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: O4S
    - annotation: !!omap
      - biggr: so4_e:-2
      - biocyc:
        - META:HSO4
        - META:SULFATE
      - chebi:
        - CHEBI:16189
      - hmdb: HMDB01448
      - inchikey: QAOWNCQODCNURD-UHFFFAOYSA-L
      - kegg.compound: C00059
      - kegg.drug: D05963
      - metanetx.chemical: MNXM58
      - reactome:
        - R-ALL-1606845
        - R-ALL-1609649
        - R-ALL-1614584
        - R-ALL-174375
        - R-ALL-427648
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00048
        - cpd29301
  - !!omap
    - id: spmd_c
    - name: spermidine(3+)
    - compartment: C_c
    - charge: 3.0
    - formula: C7H22N3
    - notes: !!omap
      - CHARGE: '3'
      - FORMULA: C7H22N3
    - annotation: !!omap
      - biggr: spmd_c:3
      - biocyc: META:SPERMIDINE
      - chebi:
        - CHEBI:57834
      - hmdb: HMDB01257
      - inchikey: ATHGHQPFGPMSJY-UHFFFAOYSA-Q
      - kegg.compound: C00315
      - metanetx.chemical: MNXM124
      - reactome:
        - R-ALL-141324
        - R-ALL-204635
      - sbo: SBO:0000247
      - seed.compound: cpd00264
  - !!omap
    - id: spmd_e
    - name: spermidine(3+)
    - compartment: C_e
    - charge: 3.0
    - formula: C7H22N3
    - notes: !!omap
      - CHARGE: '3'
      - FORMULA: C7H22N3
    - annotation: !!omap
      - biggr: spmd_e:3
      - biocyc: META:SPERMIDINE
      - chebi:
        - CHEBI:57834
      - hmdb: HMDB01257
      - inchikey: ATHGHQPFGPMSJY-UHFFFAOYSA-Q
      - kegg.compound: C00315
      - metanetx.chemical: MNXM124
      - reactome:
        - R-ALL-141324
        - R-ALL-204635
      - sbo: SBO:0000247
      - seed.compound: cpd00264
  - !!omap
    - id: stfrnA_c
    - name: staphyloferrin A
    - compartment: C_c
    - charge: 0.0
    - formula: C17H24N2O14
    - notes: !!omap
      - FORMULA: C17H24N2O14
    - annotation: !!omap
      - biggr: stfrnA_c:0
      - chebi:
        - CHEBI:84711
      - sbo: SBO:0000247
  - !!omap
    - id: stfrnA_e
    - name: staphyloferrin A
    - compartment: C_e
    - charge: 0.0
    - formula: C17H24N2O14
    - notes: !!omap
      - FORMULA: C17H24N2O14
    - annotation: !!omap
      - biggr: stfrnA_e:0
      - chebi:
        - CHEBI:84711
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__stfrnB_e
    - name: Staphyloferrin B
    - compartment: C_e
    - charge: 0.0
    - formula: C19H22N2O18
    - notes: !!omap
      - FORMULA: C19H22N2O18
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__stfrnB_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: __iPKB_Clostridiaceae__suc6p_c
    - name: Sucrose 6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C12H21O14P
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C12H21O14P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__suc6p_c:0
      - biocyc:
        - META:CPD-15716
        - META:SUCROSE-6P
      - chebi:
        - CHEBI:131603
        - CHEBI:15129
        - CHEBI:15130
        - CHEBI:16308
        - CHEBI:26813
        - CHEBI:57723
        - CHEBI:91002
        - CHEBI:9315
      - inchikey: PJTTXANTBQDXME-UGDNZRGBSA-L
      - kegg.compound:
        - C02591
        - C16688
      - kegg.glycan: G10508
      - metanetx.chemical: MNXM1004
      - sbo: SBO:0000247
      - seed.compound:
        - cpd01693
        - cpd19187
  - !!omap
    - id: succ_c
    - name: succinate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H4O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H4O4
    - annotation: !!omap
      - biggr: succ_c:-2
      - biocyc: META:SUC
      - chebi:
        - CHEBI:30031
      - hmdb: HMDB00254
      - inchikey: KDYFGRWQOYBRFD-UHFFFAOYSA-L
      - kegg.compound: C00042
      - lipidmaps: LMFA01170043
      - metanetx.chemical: MNXM25
      - reactome:
        - R-ALL-113536
        - R-ALL-159939
        - R-ALL-29434
        - R-ALL-389583
        - R-ALL-433123
        - R-ALL-5278787
      - sbo: SBO:0000247
      - seed.compound: cpd00036
  - !!omap
    - id: succ_p
    - name: succinate(2-)
    - compartment: C_p
    - charge: -2.0
    - formula: C4H4O4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H4O4
    - annotation: !!omap
      - biggr: succ_p:-2
      - biocyc: META:SUC
      - chebi:
        - CHEBI:30031
      - hmdb: HMDB00254
      - inchikey: KDYFGRWQOYBRFD-UHFFFAOYSA-L
      - kegg.compound: C00042
      - lipidmaps: LMFA01170043
      - metanetx.chemical: MNXM25
      - reactome:
        - R-ALL-113536
        - R-ALL-159939
        - R-ALL-29434
        - R-ALL-389583
        - R-ALL-433123
        - R-ALL-5278787
      - sbo: SBO:0000247
      - seed.compound: cpd00036
  - !!omap
    - id: succoa_c
    - name: succinyl-CoA(5-)
    - compartment: C_c
    - charge: -5.0
    - formula: C25H35N7O19P3S
    - notes: !!omap
      - CHARGE: '-5'
      - FORMULA: C25H35N7O19P3S
    - annotation: !!omap
      - biggr: succoa_c:-5
      - biocyc: META:SUC-COA
      - chebi:
        - CHEBI:57292
      - hmdb: HMDB01022
      - inchikey: VNOYUJKHFWYWIR-ITIYDSSPSA-I
      - kegg.compound: C00091
      - lipidmaps: LMFA07050370
      - metanetx.chemical: MNXM92
      - reactome: R-ALL-70958
      - sbo: SBO:0000247
      - seed.compound: cpd00078
  - !!omap
    - id: suchms_c
    - name: O-succinyl-L-homoserinate(1-)
    - compartment: C_c
    - charge: -1.0
    - formula: C8H12NO6
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C8H12NO6
    - annotation: !!omap
      - biggr: suchms_c:-1
      - biocyc: META:O-SUCCINYL-L-HOMOSERINE
      - chebi:
        - CHEBI:57661
      - inchikey: GNISQJGXJIDKDJ-YFKPBYRVSA-M
      - kegg.compound: C01118
      - metanetx.chemical: MNXM820
      - sbo: SBO:0000247
      - seed.compound: cpd00822
  - !!omap
    - id: sucr_c
    - name: sucrose
    - compartment: C_c
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: sucr_c:0
      - biocyc: META:SUCROSE
      - chebi:
        - CHEBI:17992
      - hmdb: HMDB00258
      - inchikey: CZMRCDWAGMRECN-UGDNZRGBSA-N
      - kegg.compound: C00089
      - kegg.drug: D00025
      - kegg.glycan: G00370
      - metanetx.chemical: MNXM167
      - reactome: R-ALL-188980
      - sbo: SBO:0000247
      - seed.compound: cpd00076
  - !!omap
    - id: sucr_e
    - name: sucrose
    - compartment: C_e
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: sucr_e:0
      - biocyc: META:SUCROSE
      - chebi:
        - CHEBI:17992
      - hmdb: HMDB00258
      - inchikey: CZMRCDWAGMRECN-UGDNZRGBSA-N
      - kegg.compound: C00089
      - kegg.drug: D00025
      - kegg.glycan: G00370
      - metanetx.chemical: MNXM167
      - reactome: R-ALL-188980
      - sbo: SBO:0000247
      - seed.compound: cpd00076
  - !!omap
    - id: __iPKB_Clostridiaceae__tag6p__D_c
    - name: D-Tagatose 6-phosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H11O9P
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C6H11O9P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__tag6p__D_c:0
      - biocyc: META:TAGATOSE-6-PHOSPHATE
      - chebi:
        - CHEBI:13025
        - CHEBI:17837
        - CHEBI:21097
        - CHEBI:4251
        - CHEBI:58695
      - hmdb: HMDB06873
      - inchikey: BGWGXPAPYGQALX-OEXCPVAWSA-L
      - kegg.compound: C01097
      - metanetx.chemical: MNXM795
      - sbo: SBO:0000247
      - seed.compound: cpd00805
  - !!omap
    - id: __iPKB_Clostridiaceae__tagdp__D_c
    - name: D-Tagatose 1,6-biphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C6H10O12P2
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C6H10O12P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__tagdp__D_c:0
      - biocyc: META:TAGATOSE-1-6-DIPHOSPHATE
      - chebi:
        - CHEBI:13024
        - CHEBI:16743
        - CHEBI:21096
        - CHEBI:4250
        - CHEBI:58694
      - hmdb: HMDB06872
      - inchikey: RNBGYGVWRKECFJ-OEXCPVAWSA-J
      - kegg.compound: C03785
      - metanetx.chemical: MNXM1324
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02371
        - cpd29681
  - !!omap
    - id: __iPKB_Clostridiaceae__td2coa_c
    - name: Trans-Tetradec-2-enoyl-CoA
    - compartment: C_c
    - charge: 0.0
    - formula: C35H56N7O17P3S
    - notes: !!omap
      - CHARGE: '-4.0'
      - FORMULA: C35H56N7O17P3S
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__td2coa_c:0
      - biocyc: META:CPD-15568
      - chebi:
        - CHEBI:10734
        - CHEBI:27079
        - CHEBI:27721
        - CHEBI:61405
      - hmdb:
        - HMDB03946
        - HMDB13082
      - inchikey: MBCVYCOKMMMWLX-YYMFEJJQSA-J
      - kegg.compound: C05273
      - lipidmaps:
        - LMFA07050021
        - LMFA07050396
      - metanetx.chemical: MNXM654
      - reactome: R-ALL-77273
      - sbo: SBO:0000247
      - seed.compound: cpd03127
  - !!omap
    - id: tdcoa_c
    - name: myristoyl-CoA(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C35H58N7O17P3S
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C35H58N7O17P3S
    - annotation: !!omap
      - biggr: tdcoa_c:-4
      - biocyc: META:TETRADECANOYL-COA
      - chebi:
        - CHEBI:57385
      - hmdb:
        - HMDB01521
        - HMDB06517
      - inchikey: DUAFKXOFBZQTQE-QSGBVPJFSA-J
      - kegg.compound: C02593
      - lipidmaps:
        - LMFA07050008
        - LMFA07050352
        - LMFA07050373
      - metanetx.chemical: MNXM224
      - reactome: R-ALL-77272
      - sbo: SBO:0000247
      - seed.compound: cpd01695
  - !!omap
    - id: __iPKB_Clostridiaceae__tgt_e
    - name: Tagatose
    - compartment: C_e
    - charge: 0.0
    - formula: C6H12O6
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C6H12O6
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__tgt_e:0
      - sbo: SBO:0000247
  - !!omap
    - id: thdp_c
    - name: (S)-2,3,4,5-tetrahydrodipicolinate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C7H7NO4
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C7H7NO4
    - annotation: !!omap
      - biggr: thdp_c:-2
      - biocyc: META:DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE
      - chebi:
        - CHEBI:16845
      - hmdb: HMDB12289
      - inchikey: CXMBCXQHOXUCEO-BYPYZUCNSA-L
      - kegg.compound: C03972
      - metanetx.chemical: MNXM480
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02465
        - cpd29199
  - !!omap
    - id: thf_c
    - name: (6S)-5,6,7,8-tetrahydrofolate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C19H21N7O6
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C19H21N7O6
    - annotation: !!omap
      - biggr: thf_c:-2
      - biocyc: META:THF
      - chebi:
        - CHEBI:57453
      - inchikey: MSTNYGQPCMXVAQ-RYUDHWBXSA-L
      - kegg.compound: C00101
      - metanetx.chemical: MNXM79
      - reactome:
        - R-ALL-111355
        - R-ALL-200671
      - sbo: SBO:0000247
      - seed.compound: cpd29254
  - !!omap
    - id: thm_c
    - name: thiamine(1+)
    - compartment: C_c
    - charge: 1.0
    - formula: C12H17N4OS
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C12H17N4OS
    - annotation: !!omap
      - biggr: thm_c:1
      - chebi:
        - CHEBI:18385
      - inchikey: MYVIATVLJGTBFV-UHFFFAOYSA-M
      - kegg.drug: D08580
      - metanetx.chemical: MNXM161565
      - sbo: SBO:0000247
      - seed.compound: cpd00305
  - !!omap
    - id: thmmp_c
    - name: thiamine(1+) monophosphate(2-)
    - compartment: C_c
    - charge: -1.0
    - formula: C12H16N4O4PS
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C12H16N4O4PS
    - annotation: !!omap
      - biggr: thmmp_c:-1
      - biocyc: META:THIAMINE-P
      - chebi:
        - CHEBI:37575
      - hmdb: HMDB02666
      - inchikey: HZSAJDVWZRBGIF-UHFFFAOYSA-M
      - kegg.compound: C01081
      - metanetx.chemical: MNXM662
      - sbo: SBO:0000247
      - seed.compound: cpd00793
  - !!omap
    - id: thmpp_c
    - name: thiamine(1+) diphosphate(3-)
    - compartment: C_c
    - charge: -2.0
    - formula: C12H16N4O7P2S
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C12H16N4O7P2S
    - annotation: !!omap
      - biggr: thmpp_c:-2
      - biocyc: META:THIAMINE-PYROPHOSPHATE
      - chebi:
        - CHEBI:58937
      - hmdb:
        - HMDB01372
        - HMDB62636
      - inchikey: AYEKOFBPNLCAJY-UHFFFAOYSA-L
      - kegg.compound: C00068
      - metanetx.chemical: MNXM256
      - reactome:
        - R-ALL-29480
        - R-ALL-8878387
      - sbo: SBO:0000247
      - seed.compound: cpd00056
  - !!omap
    - id: thr__L_c
    - name: L-threonine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C4H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO3
    - annotation: !!omap
      - biggr: thr__L_c:0
      - biocyc: META:THR
      - chebi:
        - CHEBI:57926
        - CHEBI:16857
      - hmdb: HMDB00167
      - inchikey: AYFVYJQAPQTCCC-GBXIJSLDSA-N
      - kegg.compound: C00188
      - kegg.drug: D00041
      - metanetx.chemical: MNXM142
      - reactome:
        - R-ALL-351990
        - R-ALL-352000
        - R-ALL-379706
      - sbo: SBO:0000247
      - seed.compound: cpd00161
  - !!omap
    - id: thr__L_e
    - name: L-threonine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C4H9NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H9NO3
    - annotation: !!omap
      - biggr: thr__L_e:0
      - biocyc: META:THR
      - chebi:
        - CHEBI:57926
        - CHEBI:16857
      - hmdb: HMDB00167
      - inchikey: AYFVYJQAPQTCCC-GBXIJSLDSA-N
      - kegg.compound: C00188
      - kegg.drug: D00041
      - metanetx.chemical: MNXM142
      - reactome:
        - R-ALL-351990
        - R-ALL-352000
        - R-ALL-379706
      - sbo: SBO:0000247
      - seed.compound: cpd00161
  - !!omap
    - id: thrp_c
    - name: O-phosphonato-L-threonine(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C4H8NO6P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C4H8NO6P
    - annotation: !!omap
      - biggr: thrp_c:-2
      - biocyc: META:L-THREONINE-O-3-PHOSPHATE
      - chebi:
        - CHEBI:58675
      - hmdb: HMDB11185
      - inchikey: USRGIUJOYOXOQJ-GBXIJSLDSA-L
      - kegg.compound: C12147
      - metanetx.chemical: MNXM1492
      - sbo: SBO:0000247
      - seed.compound: cpd08928
  - !!omap
    - id: thym_c
    - name: thymine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H6N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H6N2O2
    - annotation: !!omap
      - biggr: thym_c:0
      - biocyc: META:THYMINE
      - chebi:
        - CHEBI:17821
      - hmdb: HMDB00262
      - inchikey: RWQNBRDOKXIBIV-UHFFFAOYSA-N
      - kegg.compound: C00178
      - metanetx.chemical: MNXM386
      - reactome: R-ALL-83960
      - sbo: SBO:0000247
      - seed.compound: cpd00151
  - !!omap
    - id: thym_e
    - name: thymine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H6N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H6N2O2
    - annotation: !!omap
      - biggr: thym_e:0
      - biocyc: META:THYMINE
      - chebi:
        - CHEBI:17821
      - hmdb: HMDB00262
      - inchikey: RWQNBRDOKXIBIV-UHFFFAOYSA-N
      - kegg.compound: C00178
      - metanetx.chemical: MNXM386
      - reactome: R-ALL-83960
      - sbo: SBO:0000247
      - seed.compound: cpd00151
  - !!omap
    - id: thymd_c
    - name: thymidine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H14N2O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H14N2O5
    - annotation: !!omap
      - biggr: thymd_c:0
      - biocyc: META:THYMIDINE
      - chebi:
        - CHEBI:17748
      - hmdb: HMDB00273
      - inchikey: IQFYYKKMVGJFEH-XLPZGREQSA-N
      - kegg.compound: C00214
      - metanetx.chemical: MNXM420
      - reactome: R-ALL-83928
      - sbo: SBO:0000247
      - seed.compound: cpd00184
  - !!omap
    - id: tmam_c
    - name: trimethylammonium
    - compartment: C_c
    - charge: 1.0
    - formula: C3H10N
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C3H10N
    - annotation: !!omap
      - biggr: tmam_c:1
      - chebi:
        - CHEBI:58389
      - sbo: SBO:0000247
  - !!omap
    - id: tmam_e
    - name: trimethylammonium
    - compartment: C_e
    - charge: 1.0
    - formula: C3H10N
    - notes: !!omap
      - CHARGE: '1'
      - FORMULA: C3H10N
    - annotation: !!omap
      - biggr: tmam_e:1
      - chebi:
        - CHEBI:58389
      - sbo: SBO:0000247
  - !!omap
    - id: trdox_c
    - name: '[thioredoxin]-dithiol'
    - compartment: C_c
    - charge: 0.0
    - formula: C10H12N4O4S2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H12N4O4S2
    - annotation: !!omap
      - biggr: trdox_c:C0
      - biocyc: META:Ox-Thioredoxin
      - chebi:
        - CHEBI:14726
        - CHEBI:15240
        - CHEBI:18191
        - CHEBI:7845
      - kegg.compound: C00343
      - metanetx.chemical: MNXM148
      - reactome: R-ALL-2142833
      - sbo: SBO:0000252
      - seed.compound:
        - cpd11420
        - cpd27735
        - cpd29682
  - !!omap
    - id: trdrd_c
    - name: '[thioredoxin]-disulfide'
    - compartment: C_c
    - charge: 0.0
    - formula: C10H14N4O4S2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H14N4O4S2
    - annotation: !!omap
      - biggr: trdrd_c:C0
      - biocyc: META:Red-Thioredoxin
      - chebi: CHEBI:15033
      - kegg.compound: C00342
      - metanetx.chemical: MNXM96993
      - reactome: R-ALL-2142774
      - sbo: SBO:0000252
      - seed.compound:
        - cpd11421
        - cpd28060
  - !!omap
    - id: tre6p_c
    - name: alpha,alpha-trehalose 6-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C12H21O14P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C12H21O14P
    - annotation: !!omap
      - biggr: tre6p_c:-2
      - biocyc: META:TREHALOSE-6P
      - chebi:
        - CHEBI:58429
      - hmdb: HMDB01124
      - inchikey: LABSPYBHMPDTEL-LIZSDCNHSA-L
      - kegg.compound: C00689
      - kegg.glycan: G09795
      - metanetx.chemical: MNXM448
      - reactome: R-ALL-868701
      - sbo: SBO:0000247
      - seed.compound: cpd00523
  - !!omap
    - id: tre_e
    - name: alpha,alpha-trehalose
    - compartment: C_e
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: tre_e:0
      - biocyc:
        - META:CPD-15990
        - META:TREHALOSE
      - chebi:
        - CHEBI:16551
      - hmdb: HMDB00975
      - inchikey: HDTRYLNUVZCQOY-LIZSDCNHSA-N
      - kegg.compound: C01083
      - kegg.glycan: G00293
      - metanetx.chemical: MNXM198
      - reactome:
        - R-ALL-189078
        - R-ALL-868614
      - sbo: SBO:0000247
      - seed.compound: cpd00794
  - !!omap
    - id: tre_p
    - name: alpha,alpha-trehalose
    - compartment: C_p
    - charge: 0.0
    - formula: C12H22O11
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C12H22O11
    - annotation: !!omap
      - biggr: tre_p:0
      - biocyc:
        - META:CPD-15990
        - META:TREHALOSE
      - chebi:
        - CHEBI:16551
      - hmdb: HMDB00975
      - inchikey: HDTRYLNUVZCQOY-LIZSDCNHSA-N
      - kegg.compound: C01083
      - kegg.glycan: G00293
      - metanetx.chemical: MNXM198
      - reactome:
        - R-ALL-189078
        - R-ALL-868614
      - sbo: SBO:0000247
      - seed.compound: cpd00794
  - !!omap
    - id: trnaglu_c
    - name: tRNA(Glu)
    - compartment: C_c
    - charge: -3.0
    - formula: C28H34N11O21P3
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C28H34N11O21P3
    - annotation: !!omap
      - biggr: trnaglu_c:F-3
      - biocyc: META:GLT-tRNAs
      - chebi:
        - CHEBI:10680
        - CHEBI:15175
        - CHEBI:29175
      - kegg.compound: C01641
      - metanetx.chemical: MNXM90886
      - reactome:
        - R-ALL-379754
        - R-ALL-379778
      - sbo: SBO:0000246
      - seed.compound: cpd11912
  - !!omap
    - id: trp__L_c
    - name: L-tryptophan
    - compartment: C_c
    - charge: 0.0
    - formula: C11H12N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C11H12N2O2
    - annotation: !!omap
      - biggr: trp__L_c:0
      - biocyc: META:TRP
      - chebi:
        - CHEBI:57912
        - CHEBI:16828
      - hmdb:
        - HMDB00929
        - HMDB30396
      - inchikey: QIVBCDIJIAJPQS-VIFPVBQESA-N
      - kegg.compound:
        - C00078
        - C00806
      - kegg.drug: D00020
      - metanetx.chemical: MNXM94
      - reactome:
        - R-ALL-29500
        - R-ALL-352006
        - R-ALL-379709
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00065
        - cpd19007
  - !!omap
    - id: trp__L_e
    - name: L-tryptophan
    - compartment: C_e
    - charge: 0.0
    - formula: C11H12N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C11H12N2O2
    - annotation: !!omap
      - biggr: trp__L_e:0
      - biocyc: META:TRP
      - chebi:
        - CHEBI:57912
        - CHEBI:16828
      - hmdb:
        - HMDB00929
        - HMDB30396
      - inchikey: QIVBCDIJIAJPQS-VIFPVBQESA-N
      - kegg.compound:
        - C00078
        - C00806
      - kegg.drug: D00020
      - metanetx.chemical: MNXM94
      - reactome:
        - R-ALL-29500
        - R-ALL-352006
        - R-ALL-379709
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00065
        - cpd19007
  - !!omap
    - id: ttdca_c
    - name: tetradecanoate
    - compartment: C_c
    - charge: -1.0
    - formula: C14H27O2
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C14H27O2
    - annotation: !!omap
      - biggr: ttdca_c:-1
      - chebi:
        - CHEBI:30807
      - metanetx.chemical: MNXM162239
      - sbo: SBO:0000247
  - !!omap
    - id: tyr__L_c
    - name: L-tyrosine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H11NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H11NO3
    - annotation: !!omap
      - biggr: tyr__L_c:0
      - biocyc: META:TYR
      - chebi:
        - CHEBI:58315
        - CHEBI:17895
      - hmdb:
        - HMDB00158
        - HMDB00647
      - inchikey: OUYCCCASQSFEME-QMMMGPOBSA-N
      - kegg.compound:
        - C00082
        - C01536
      - kegg.drug: D00022
      - metanetx.chemical: MNXM76
      - reactome:
        - R-ALL-29506
        - R-ALL-352030
        - R-ALL-379710
        - R-ALL-5668567
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00069
        - cpd30745
  - !!omap
    - id: tyr__L_e
    - name: L-tyrosine
    - compartment: C_e
    - charge: 0.0
    - formula: C9H11NO3
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H11NO3
    - annotation: !!omap
      - biggr: tyr__L_e:0
      - biocyc: META:TYR
      - chebi:
        - CHEBI:58315
        - CHEBI:17895
      - hmdb:
        - HMDB00158
        - HMDB00647
      - inchikey: OUYCCCASQSFEME-QMMMGPOBSA-N
      - kegg.compound:
        - C00082
        - C01536
      - kegg.drug: D00022
      - metanetx.chemical: MNXM76
      - reactome:
        - R-ALL-29506
        - R-ALL-352030
        - R-ALL-379710
        - R-ALL-5668567
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00069
        - cpd30745
  - !!omap
    - id: __iPKB_Clostridiaceae__uaagmda_c
    - name: 
        Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala
    - compartment: C_c
    - charge: 0.0
    - formula: C95H153N8O28P2
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C95H153N8O28P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__uaagmda_c:0
      - biocyc: META:C6
      - chebi:
        - CHEBI:27200
        - CHEBI:28138
        - CHEBI:61388
        - CHEBI:9870
      - inchikey: OXJNZXDFVLDLEI-MBCYCBSHSA-J
      - kegg.compound: C05898
      - kegg.glycan: G10555
      - metanetx.chemical: MNXM722781
      - sbo: SBO:0000247
      - seed.compound: cpd03495
  - !!omap
    - id: uaccg_c
    - name: UDP-N-acetyl-3-O-(1-carboxylatovinyl)-alpha-D-glucosamine(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C20H26N3O19P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C20H26N3O19P2
    - annotation: !!omap
      - biggr: uaccg_c:-3
      - biocyc: META:UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE
      - chebi:
        - CHEBI:68483
      - inchikey: BEGZZYPUNCJHKP-DBYWSUQTSA-K
      - kegg.compound: C04631
      - metanetx.chemical: MNXM1688
      - sbo: SBO:0000247
      - seed.compound: cpd02820
  - !!omap
    - id: uacgam_c
    - name: UDP-N-acetyl-alpha-D-glucosamine(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C17H25N3O17P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C17H25N3O17P2
    - annotation: !!omap
      - biggr: uacgam_c:-2
      - biocyc: META:UDP-N-ACETYL-D-GLUCOSAMINE
      - chebi:
        - CHEBI:57705
      - hmdb:
        - HMDB00290
        - HMDB62760
      - inchikey: LFTYTUAZOPRMMI-CFRASDGPSA-L
      - kegg.compound: C00043
      - kegg.glycan: G10610
      - lipidmaps: LMSL01010002
      - metanetx.chemical: MNXM47
      - reactome:
        - R-ALL-162756
        - R-ALL-3499326
        - R-ALL-914003
      - sbo: SBO:0000247
      - seed.compound: cpd00037
  - !!omap
    - id: __iPKB_Clostridiaceae__uagmda_c
    - name: 
        Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
    - compartment: C_c
    - charge: 0.0
    - formula: C87H140N7O23P2
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C87H140N7O23P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__uagmda_c:0
      - biocyc: META:C5
      - chebi:
        - CHEBI:61387
        - CHEBI:61543
      - inchikey: PNWZQTONLRRPST-KLDRQJOASA-J
      - kegg.compound: C05897
      - kegg.glycan: G10556
      - metanetx.chemical: MNXM2264
      - sbo: SBO:0000247
      - seed.compound: cpd03494
  - !!omap
    - id: uama_c
    - name: UDP-N-acetylmuramoyl-L-alaninate(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C23H33N4O20P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C23H33N4O20P2
    - annotation: !!omap
      - biggr: uama_c:-3
      - biocyc: META:CPD0-1456
      - chebi:
        - CHEBI:57953
      - inchikey: NTMMCWJNQNKACG-KBKUWGQMSA-K
      - kegg.compound: C01212
      - metanetx.chemical: MNXM1953
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00890
        - cpd29609
  - !!omap
    - id: uamag_c
    - name: UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C28H39N5O23P2
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C28H39N5O23P2
    - annotation: !!omap
      - biggr: uamag_c:-4
      - biocyc: META:UDP-AA-GLUTAMATE
      - chebi:
        - CHEBI:83900
      - inchikey: OJZCATPXPWFLHF-HPUCEMLMSA-J
      - kegg.compound: C00692
      - metanetx.chemical: MNXM955
      - sbo: SBO:0000247
      - seed.compound: cpd00525
  - !!omap
    - id: __iPKB_Clostridiaceae__uamr_c
    - name: UDP-N-acetylmuramate
    - compartment: C_c
    - charge: 0.0
    - formula: C20H28N3O19P2
    - notes: !!omap
      - CHARGE: '-3.0'
      - FORMULA: C20H28N3O19P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__uamr_c:0
      - biocyc: META:UDP-N-ACETYLMURAMATE
      - chebi:
        - CHEBI:13458
        - CHEBI:13477
        - CHEBI:17882
        - CHEBI:22120
        - CHEBI:58309
        - CHEBI:70757
        - CHEBI:70765
        - CHEBI:9827
      - inchikey: NQBRVZNDBBMBLJ-MQTLHLSBSA-K
      - kegg.compound: C01050
      - metanetx.chemical: MNXM722733
      - sbo: SBO:0000247
      - seed.compound: cpd00773
  - !!omap
    - id: __iPKB_Clostridiaceae__udcpdp_c
    - name: Undecaprenyl diphosphate
    - compartment: C_c
    - charge: 0.0
    - formula: C55H90O7P2
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C55H90O7P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__udcpdp_c:0
      - biocyc: META:CPD-9649
      - chebi:
        - CHEBI:15284
        - CHEBI:17047
        - CHEBI:27192
        - CHEBI:53042
        - CHEBI:57995
        - CHEBI:9863
      - hmdb: HMDB01469
      - inchikey: NTXGVHCCXVHYCL-RDQGWRCRSA-K
      - lipidmaps: LMPR03030004
      - metanetx.chemical: MNXM5043
      - sbo: SBO:0000247
      - seed.compound: cpd25775
  - !!omap
    - id: __iPKB_Clostridiaceae__udcpp_c
    - name: Undecaprenyl phosphate
    - compartment: C_c
    - charge: -1.0
    - formula: C55H90O4P
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C55H90O4P
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__udcpp_c:-1
      - biocyc: META:UNDECAPRENYL-P
      - chebi:
        - CHEBI:15285
        - CHEBI:15286
        - CHEBI:16141
        - CHEBI:57654
        - CHEBI:9864
      - inchikey: UFPHFKCTOZIAFY-RDQGWRCRSA-L
      - kegg.compound: C00348
      - lipidmaps: LMPR03020006
      - metanetx.chemical: MNXM251
      - sbo: SBO:0000247
      - seed.compound: cpd00286
  - !!omap
    - id: udp_c
    - name: UDP(3-)
    - compartment: C_c
    - charge: -3.0
    - formula: C9H11N2O12P2
    - notes: !!omap
      - CHARGE: '-3'
      - FORMULA: C9H11N2O12P2
    - annotation: !!omap
      - biggr: udp_c:-3
      - biocyc: META:UDP
      - chebi:
        - CHEBI:58223
      - hmdb: HMDB00295
      - inchikey: XCCTYIAWTASOJW-XVFCMESISA-K
      - kegg.compound: C00015
      - kegg.glycan: G10619
      - metanetx.chemical: MNXM17
      - reactome:
        - R-ALL-110096
        - R-ALL-111814
        - R-ALL-158602
        - R-ALL-205687
      - sbo: SBO:0000247
      - seed.compound: cpd00014
  - !!omap
    - id: __iPKB_Clostridiaceae__udpacgal_c
    - name: UDP-N-acetyl-D-galactosamine
    - compartment: C_c
    - charge: 0.0
    - formula: C17H25N3O17P2
    - notes: !!omap
      - CHARGE: '-2.0'
      - FORMULA: C17H25N3O17P2
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__udpacgal_c:0
      - biocyc: META:UDP-N-ACETYL-GALACTOSAMINE
      - chebi:
        - CHEBI:13455
        - CHEBI:13470
        - CHEBI:16650
        - CHEBI:22112
        - CHEBI:57847
        - CHEBI:9820
      - inchikey: LFTYTUAZOPRMMI-LDDHHVEYSA-L
      - kegg.compound: C00203
      - kegg.glycan: G10611
      - metanetx.chemical: MNXM162233
      - reactome: R-ALL-735700
      - sbo: SBO:0000247
      - seed.compound: cpd00175
  - !!omap
    - id: udpg_c
    - name: UDP-alpha-D-glucose(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C15H22N2O17P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpg_c:-2
      - biocyc: META:CPD-12575
      - chebi:
        - CHEBI:58885
      - hmdb: HMDB60079
      - inchikey: HSCJRCZFDFQWRP-RDKQLNKOSA-L
      - kegg.compound: C00029
      - kegg.glycan: G10608
      - metanetx.chemical: MNXM722710
      - reactome:
        - R-ALL-173594
        - R-ALL-29410
        - R-ALL-744227
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00026
        - cpd28293
  - !!omap
    - id: udpgal_c
    - name: UDP-alpha-D-galactose(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C15H22N2O17P2
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C15H22N2O17P2
    - annotation: !!omap
      - biggr: udpgal_c:-2
      - biocyc: META:CPD-14553
      - chebi:
        - CHEBI:66914
      - hmdb:
        - HMDB00302
        - HMDB62573
      - inchikey: HSCJRCZFDFQWRP-ABVWGUQPSA-L
      - kegg.compound: C00052
      - kegg.glycan: G10609
      - metanetx.chemical: MNXM89795
      - reactome:
        - R-ALL-29452
        - R-ALL-735682
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00043
        - cpd30770
  - !!omap
    - id: ugmd_c
    - name: 
        UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminoheptanedioate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C35H51N7O26P2
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C35H51N7O26P2
    - annotation: !!omap
      - biggr: ugmd_c:-4
      - chebi:
        - CHEBI:83905
      - inchikey: QUHLBZKCGUXHGP-AJVQVANPSA-J
      - metanetx.chemical: MNXM162592
      - sbo: SBO:0000247
  - !!omap
    - id: ugmda_c
    - name: 
        UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alaninate(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C41H61N9O28P2
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C41H61N9O28P2
    - annotation: !!omap
      - biggr: ugmda_c:-4
      - biocyc: META:C1
      - chebi:
        - CHEBI:61386
      - inchikey: IMWOXEZVYQDRDF-MCZXNMLPSA-J
      - kegg.compound: C04882
      - metanetx.chemical: MNXM1954
      - sbo: SBO:0000247
      - seed.compound:
        - cpd02932
        - cpd02968
  - !!omap
    - id: ump_c
    - name: uridine 5'-monophosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C9H11N2O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C9H11N2O9P
    - annotation: !!omap
      - biggr: ump_c:-2
      - biocyc: META:UMP
      - chebi:
        - CHEBI:57865
      - hmdb: HMDB00288
      - inchikey: DJJCXFVJDGTHFX-XVFCMESISA-L
      - kegg.compound: C00105
      - metanetx.chemical: MNXM80
      - reactome:
        - R-ALL-109402
        - R-ALL-735698
      - sbo: SBO:0000247
      - seed.compound: cpd00091
  - !!omap
    - id: uppg3_c
    - name: uroporphyrinogen III(8-)
    - compartment: C_c
    - charge: -8.0
    - formula: C40H36N4O16
    - notes: !!omap
      - CHARGE: '-8'
      - FORMULA: C40H36N4O16
    - annotation: !!omap
      - biggr: uppg3_c:-8
      - biocyc: META:UROPORPHYRINOGEN-III
      - chebi:
        - CHEBI:57308
      - hmdb: HMDB01086
      - inchikey: HUHWZXWWOFSFKF-UHFFFAOYSA-F
      - kegg.compound: C01051
      - metanetx.chemical: MNXM414
      - reactome: R-ALL-189407
      - sbo: SBO:0000247
      - seed.compound: cpd00774
  - !!omap
    - id: ura_c
    - name: uracil
    - compartment: C_c
    - charge: 0.0
    - formula: C4H4N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H4N2O2
    - annotation: !!omap
      - biggr: ura_c:0
      - biocyc: META:URACIL
      - chebi:
        - CHEBI:17568
      - hmdb: HMDB00300
      - inchikey: ISAKRJDGNUQOIC-UHFFFAOYSA-N
      - kegg.compound: C00106
      - kegg.drug:
        - D00027
        - D09776
      - metanetx.chemical: MNXM158
      - reactome: R-ALL-83962
      - sbo: SBO:0000247
      - seed.compound: cpd00092
  - !!omap
    - id: ura_e
    - name: uracil
    - compartment: C_e
    - charge: 0.0
    - formula: C4H4N2O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C4H4N2O2
    - annotation: !!omap
      - biggr: ura_e:0
      - biocyc: META:URACIL
      - chebi:
        - CHEBI:17568
      - hmdb: HMDB00300
      - inchikey: ISAKRJDGNUQOIC-UHFFFAOYSA-N
      - kegg.compound: C00106
      - kegg.drug:
        - D00027
        - D09776
      - metanetx.chemical: MNXM158
      - reactome: R-ALL-83962
      - sbo: SBO:0000247
      - seed.compound: cpd00092
  - !!omap
    - id: urdglyc_c
    - name: (-)-ureidoglycolate
    - compartment: C_c
    - charge: -1.0
    - formula: C3H5N2O4
    - notes: !!omap
      - CHARGE: '-1'
      - FORMULA: C3H5N2O4
    - annotation: !!omap
      - biggr: urdglyc_c:-1
      - biocyc: META:CPD-1091
      - chebi:
        - CHEBI:57296
      - hmdb: HMDB01005
      - inchikey: NWZYYCVIOKVTII-SFOWXEAESA-M
      - kegg.compound:
        - C00603
        - C02766
      - metanetx.chemical: MNXM490
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00465
        - cpd01786
  - !!omap
    - id: urea_c
    - name: carbamimidic acid
    - compartment: C_c
    - charge: 0.0
    - formula: CH4N2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4N2O
    - annotation: !!omap
      - biggr: urea_c:0
      - biocyc: META:UREA
      - chebi:
        - CHEBI:16199
        - CHEBI:48376
      - hmdb: HMDB00294
      - inchikey: XSQUKJJJFZCRTK-UHFFFAOYSA-N
      - kegg.compound: C00086
      - kegg.drug:
        - D00023
        - D01749
        - D10496
      - metanetx.chemical: MNXM117
      - reactome:
        - R-ALL-29514
        - R-ALL-374061
        - R-ALL-432019
      - sbo: SBO:0000247
      - seed.compound: cpd00073
  - !!omap
    - id: urea_e
    - name: carbamimidic acid
    - compartment: C_e
    - charge: 0.0
    - formula: CH4N2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4N2O
    - annotation: !!omap
      - biggr: urea_e:0
      - biocyc: META:UREA
      - chebi:
        - CHEBI:16199
        - CHEBI:48376
      - hmdb: HMDB00294
      - inchikey: XSQUKJJJFZCRTK-UHFFFAOYSA-N
      - kegg.compound: C00086
      - kegg.drug:
        - D00023
        - D01749
        - D10496
      - metanetx.chemical: MNXM117
      - reactome:
        - R-ALL-29514
        - R-ALL-374061
        - R-ALL-432019
      - sbo: SBO:0000247
      - seed.compound: cpd00073
  - !!omap
    - id: urea_p
    - name: carbamimidic acid
    - compartment: C_p
    - charge: 0.0
    - formula: CH4N2O
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: CH4N2O
    - annotation: !!omap
      - biggr: urea_p:0
      - biocyc: META:UREA
      - chebi:
        - CHEBI:16199
        - CHEBI:48376
      - hmdb: HMDB00294
      - inchikey: XSQUKJJJFZCRTK-UHFFFAOYSA-N
      - kegg.compound: C00086
      - kegg.drug:
        - D00023
        - D01749
        - D10496
      - metanetx.chemical: MNXM117
      - reactome:
        - R-ALL-29514
        - R-ALL-374061
        - R-ALL-432019
      - sbo: SBO:0000247
      - seed.compound: cpd00073
  - !!omap
    - id: uri_c
    - name: uridine
    - compartment: C_c
    - charge: 0.0
    - formula: C9H12N2O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C9H12N2O6
    - annotation: !!omap
      - biggr: uri_c:0
      - biocyc: META:URIDINE
      - chebi:
        - CHEBI:16704
      - hmdb: HMDB00296
      - inchikey: DRTQHJPVMGBUCF-XVFCMESISA-N
      - kegg.compound: C00299
      - metanetx.chemical: MNXM288
      - sbo: SBO:0000247
      - seed.compound: cpd00249
  - !!omap
    - id: utp_c
    - name: UTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C9H11N2O15P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C9H11N2O15P3
    - annotation: !!omap
      - biggr: utp_c:-4
      - biocyc: META:UTP
      - chebi:
        - CHEBI:46398
      - hmdb: HMDB00285
      - inchikey: PGAVKCOVUIYSFO-XVFCMESISA-J
      - kegg.compound: C00075
      - metanetx.chemical: MNXM121
      - reactome: R-ALL-29494
      - sbo: SBO:0000247
      - seed.compound: cpd00062
  - !!omap
    - id: val__L_c
    - name: L-valine zwitterion
    - compartment: C_c
    - charge: 0.0
    - formula: C5H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2
    - annotation: !!omap
      - biggr: val__L_c:0
      - biocyc: META:VAL
      - chebi:
        - CHEBI:57762
        - CHEBI:16414
      - hmdb:
        - HMDB00883
        - HMDB34366
      - inchikey: KZSNJWFQEVHDMF-BYPYZUCNSA-N
      - kegg.compound:
        - C00183
        - C16436
      - kegg.drug: D00039
      - lipidmaps: LMFA01100046
      - metanetx.chemical: MNXM199
      - reactome:
        - R-ALL-113540
        - R-ALL-29702
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00156
        - cpd15141
  - !!omap
    - id: val__L_e
    - name: L-valine zwitterion
    - compartment: C_e
    - charge: 0.0
    - formula: C5H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2
    - annotation: !!omap
      - biggr: val__L_e:0
      - biocyc: META:VAL
      - chebi:
        - CHEBI:57762
        - CHEBI:16414
      - hmdb:
        - HMDB00883
        - HMDB34366
      - inchikey: KZSNJWFQEVHDMF-BYPYZUCNSA-N
      - kegg.compound:
        - C00183
        - C16436
      - kegg.drug: D00039
      - lipidmaps: LMFA01100046
      - metanetx.chemical: MNXM199
      - reactome:
        - R-ALL-113540
        - R-ALL-29702
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00156
        - cpd15141
  - !!omap
    - id: val__L_p
    - name: L-valine zwitterion
    - compartment: C_p
    - charge: 0.0
    - formula: C5H11NO2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H11NO2
    - annotation: !!omap
      - biggr: val__L_p:0
      - biocyc: META:VAL
      - chebi:
        - CHEBI:57762
        - CHEBI:16414
      - hmdb:
        - HMDB00883
        - HMDB34366
      - inchikey: KZSNJWFQEVHDMF-BYPYZUCNSA-N
      - kegg.compound:
        - C00183
        - C16436
      - kegg.drug: D00039
      - lipidmaps: LMFA01100046
      - metanetx.chemical: MNXM199
      - reactome:
        - R-ALL-113540
        - R-ALL-29702
      - sbo: SBO:0000247
      - seed.compound:
        - cpd00156
        - cpd15141
  - !!omap
    - id: xan_c
    - name: 7H-xanthine
    - compartment: C_c
    - charge: 0.0
    - formula: C5H4N4O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H4N4O2
    - annotation: !!omap
      - biggr: xan_c:0
      - biocyc: META:XANTHINE
      - chebi:
        - CHEBI:17712
        - CHEBI:48517
      - hmdb: HMDB00292
      - inchikey: LRFVTYWOQMYALW-UHFFFAOYSA-N
      - kegg.compound: C00385
      - metanetx.chemical: MNXM174
      - reactome: R-ALL-30064
      - sbo: SBO:0000247
      - seed.compound: cpd00309
  - !!omap
    - id: xan_e
    - name: 7H-xanthine
    - compartment: C_e
    - charge: 0.0
    - formula: C5H4N4O2
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H4N4O2
    - annotation: !!omap
      - biggr: xan_e:0
      - biocyc: META:XANTHINE
      - chebi:
        - CHEBI:17712
        - CHEBI:48517
      - hmdb: HMDB00292
      - inchikey: LRFVTYWOQMYALW-UHFFFAOYSA-N
      - kegg.compound: C00385
      - metanetx.chemical: MNXM174
      - reactome: R-ALL-30064
      - sbo: SBO:0000247
      - seed.compound: cpd00309
  - !!omap
    - id: xmp_c
    - name: 5'-xanthylate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C10H11N4O9P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C10H11N4O9P
    - annotation: !!omap
      - biggr: xmp_c:-2
      - biocyc: META:XANTHOSINE-5-PHOSPHATE
      - chebi:
        - CHEBI:57464
      - hmdb:
        - HMDB01554
        - HMDB62755
      - inchikey: DCTLYFZHFGENCW-UUOKFMHZSA-L
      - kegg.compound: C00655
      - metanetx.chemical: MNXM298
      - reactome: R-ALL-111584
      - sbo: SBO:0000247
      - seed.compound: cpd00497
  - !!omap
    - id: xtp_c
    - name: XTP(4-)
    - compartment: C_c
    - charge: -4.0
    - formula: C10H11N4O15P3
    - notes: !!omap
      - CHARGE: '-4'
      - FORMULA: C10H11N4O15P3
    - annotation: !!omap
      - biggr: xtp_c:-4
      - biocyc: META:XTP
      - chebi:
        - CHEBI:61314
      - hmdb: HMDB00293
      - inchikey: CAEFEWVYEZABLA-UUOKFMHZSA-J
      - kegg.compound: C00700
      - metanetx.chemical: MNXM1860
      - reactome: R-ALL-2509848
      - sbo: SBO:0000247
      - seed.compound: cpd00530
  - !!omap
    - id: xtsn_c
    - name: xanthosine
    - compartment: C_c
    - charge: 0.0
    - formula: C10H12N4O6
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C10H12N4O6
    - annotation: !!omap
      - biggr: xtsn_c:0
      - biocyc: META:XANTHOSINE
      - chebi:
        - CHEBI:18107
      - hmdb: HMDB00299
      - inchikey: UBORTCNDUKBEOP-UUOKFMHZSA-N
      - kegg.compound: C01762
      - metanetx.chemical: MNXM687
      - sbo: SBO:0000247
      - seed.compound: cpd01217
  - !!omap
    - id: xu5p__D_c
    - name: D-xylulose 5-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O8P
    - annotation: !!omap
      - biggr: xu5p__D_c:-2
      - biocyc: META:XYLULOSE-5-PHOSPHATE
      - chebi:
        - CHEBI:57737
      - hmdb:
        - HMDB00868
        - HMDB06212
      - inchikey: FNZLKVNUWIIPSJ-RFZPGFLSSA-L
      - kegg.compound: C00231
      - metanetx.chemical: MNXM186
      - reactome: R-ALL-29790
      - sbo: SBO:0000247
      - seed.compound: cpd00198
  - !!omap
    - id: xu5p__L_c
    - name: L-xylulose 5-phosphate(2-)
    - compartment: C_c
    - charge: -2.0
    - formula: C5H9O8P
    - notes: !!omap
      - CHARGE: '-2'
      - FORMULA: C5H9O8P
    - annotation: !!omap
      - biggr: xu5p__L_c:-2
      - biocyc: META:L-XYLULOSE-5-P
      - chebi:
        - CHEBI:57829
      - inchikey: FNZLKVNUWIIPSJ-WHFBIAKZSA-L
      - kegg.compound: C03291
      - metanetx.chemical: MNXM1238
      - sbo: SBO:0000247
      - seed.compound: cpd02100
  - !!omap
    - id: xyl__D_c
    - name: D-xylopyranose
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: xyl__D_c:0
      - biocyc: META:D-Xylopyranose
      - chebi:
        - CHEBI:53455
      - hmdb:
        - HMDB00098
        - HMDB03763
      - inchikey: SRBFZHDQGSBBOR-IOVATXLUSA-N
      - kegg.compound: C00181
      - kegg.drug: D06346
      - metanetx.chemical: MNXM348
      - reactome: R-ALL-2090063
      - sbo: SBO:0000247
      - seed.compound: cpd00154
  - !!omap
    - id: xyl__D_e
    - name: D-xylopyranose
    - compartment: C_e
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: xyl__D_e:0
      - biocyc: META:D-Xylopyranose
      - chebi:
        - CHEBI:53455
      - hmdb:
        - HMDB00098
        - HMDB03763
      - inchikey: SRBFZHDQGSBBOR-IOVATXLUSA-N
      - kegg.compound: C00181
      - kegg.drug: D06346
      - metanetx.chemical: MNXM348
      - reactome: R-ALL-2090063
      - sbo: SBO:0000247
      - seed.compound: cpd00154
  - !!omap
    - id: xylu__D_c
    - name: D-xylulose
    - compartment: C_c
    - charge: 0.0
    - formula: C5H10O5
    - notes: !!omap
      - CHARGE: '0'
      - FORMULA: C5H10O5
    - annotation: !!omap
      - biggr: xylu__D_c:0
      - biocyc: META:D-XYLULOSE
      - chebi:
        - CHEBI:17140
      - hmdb:
        - HMDB00654
        - HMDB01644
      - inchikey: ZAQJHHRNXZUBTE-WUJLRWPWSA-N
      - kegg.compound: C00310
      - metanetx.chemical: MNXM597
      - reactome: R-ALL-5661281
      - sbo: SBO:0000247
      - seed.compound: cpd00259
  - !!omap
    - id: zn2_c
    - name: zinc(2+)
    - compartment: C_c
    - charge: 2.0
    - formula: Zn
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Zn
    - annotation: !!omap
      - biggr: zn2_c:2
      - biocyc: META:ZN+2
      - chebi:
        - CHEBI:29105
      - hmdb: HMDB01303
      - inchikey: PTFCDOFLOPIGGS-UHFFFAOYSA-N
      - kegg.compound: C00038
      - metanetx.chemical: MNXM149
      - reactome:
        - R-ALL-158417
        - R-ALL-216667
        - R-ALL-216785
        - R-ALL-29426
        - R-ALL-435350
        - R-ALL-437093
        - R-ALL-442320
      - sbo: SBO:0000247
      - seed.compound: cpd00034
  - !!omap
    - id: zn2_e
    - name: zinc(2+)
    - compartment: C_e
    - charge: 2.0
    - formula: Zn
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Zn
    - annotation: !!omap
      - biggr: zn2_e:2
      - biocyc: META:ZN+2
      - chebi:
        - CHEBI:29105
      - hmdb: HMDB01303
      - inchikey: PTFCDOFLOPIGGS-UHFFFAOYSA-N
      - kegg.compound: C00038
      - metanetx.chemical: MNXM149
      - reactome:
        - R-ALL-158417
        - R-ALL-216667
        - R-ALL-216785
        - R-ALL-29426
        - R-ALL-435350
        - R-ALL-437093
        - R-ALL-442320
      - sbo: SBO:0000247
      - seed.compound: cpd00034
  - !!omap
    - id: zn2_p
    - name: zinc(2+)
    - compartment: C_p
    - charge: 2.0
    - formula: Zn
    - notes: !!omap
      - CHARGE: '2'
      - FORMULA: Zn
    - annotation: !!omap
      - biggr: zn2_p:2
      - biocyc: META:ZN+2
      - chebi:
        - CHEBI:29105
      - hmdb: HMDB01303
      - inchikey: PTFCDOFLOPIGGS-UHFFFAOYSA-N
      - kegg.compound: C00038
      - metanetx.chemical: MNXM149
      - reactome:
        - R-ALL-158417
        - R-ALL-216667
        - R-ALL-216785
        - R-ALL-29426
        - R-ALL-435350
        - R-ALL-437093
        - R-ALL-442320
      - sbo: SBO:0000247
      - seed.compound: cpd00034
- reactions:
  - !!omap
    - id: EX_2ameph_e
    - name: Exchange of (2-aminoethyl)phosphonic acid zwitterion.
    - metabolites: !!omap
      - 2ameph_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_2ameph_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_2hxmp_e
    - name: Exchange of salicyl alcohol.
    - metabolites: !!omap
      - 2hxmp_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_2hxmp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_2pglyc_e
    - name: Exchange of 2-phosphonatoglycolate(3-).
    - metabolites: !!omap
      - 2pglyc_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_2pglyc_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_4abut_e
    - name: Exchange of gamma-aminobutyric acid zwitterion.
    - metabolites: !!omap
      - 4abut_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_4abut_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_4abutn_e
    - name: Exchange of 4-ammoniobutanal.
    - metabolites: !!omap
      - 4abutn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_4abutn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_4hba_e
    - name: Exchange of p-hydroxybenzyl alcohol.
    - metabolites: !!omap
      - 4hba_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_4hba_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_5dglcn_e
    - name: Exchange of 5-dehydro-D-gluconate.
    - metabolites: !!omap
      - 5dglcn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_5dglcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_5drib_e
    - name: EX_5drib_e
    - metabolites: !!omap
      - 5drib_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_5drib_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_5mdru1p_e
    - name: Exchange of S-methyl-5-thio-D-ribulose 1-phosphate(2-).
    - metabolites: !!omap
      - 5mdru1p_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_5mdru1p_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_LalaLglu_e
    - name: Exchange of L-alanyl-L-glutamate(1-).
    - metabolites: !!omap
      - LalaLglu_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_LalaLglu_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__R3hdec4e_e
    - name: EX_R3hdec4e_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R3hdec4e_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__R3hdec4e_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__R_3hdda_e
    - name: EX_R_3hdda_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R_3hdda_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__R_3hdda_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_acald_e
    - name: Exchange of acetaldehyde.
    - metabolites: !!omap
      - acald_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acald_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_acgam_e
    - name: Exchange of N-acetyl-D-glucosamine.
    - metabolites: !!omap
      - acgam_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acgam_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_acmana_e
    - name: Exchange of N-acetyl-D-mannosamine.
    - metabolites: !!omap
      - acmana_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acmana_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_acnam_e
    - name: Exchange of N-acetyl-beta-neuraminate.
    - metabolites: !!omap
      - acnam_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_acnam_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_actn__R_e
    - name: Exchange of (R)-acetoin.
    - metabolites: !!omap
      - actn__R_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_actn__R_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ade_e
    - name: Exchange of adenine.
    - metabolites: !!omap
      - ade_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ade_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ala_L_asp__L_e
    - name: Exchange of Ala-Asp(1-).
    - metabolites: !!omap
      - ala_L_asp__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ala_L_asp__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__ala_L_glu__L_e
    - name: EX_ala_L_glu__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_L_glu__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__ala_L_glu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__ala_L_thr__L_e
    - name: EX_ala_L_thr__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_L_thr__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__ala_L_thr__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ala__D_e
    - name: Exchange of D-alanine zwitterion.
    - metabolites: !!omap
      - ala__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ala__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ala__L_e
    - name: Exchange of L-alanine zwitterion.
    - metabolites: !!omap
      - ala__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ala__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__ala_gln_e
    - name: EX_ala_gln_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_gln_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__ala_gln_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__ala_his_e
    - name: EX_ala_his_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_his_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__ala_his_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__ala_leu_e
    - name: EX_ala_leu_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_leu_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__ala_leu_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_alaala_e
    - name: Exchange of D-alanyl-D-alanine zwitterion.
    - metabolites: !!omap
      - alaala_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_alaala_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__alagly_e
    - name: EX_alagly_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__alagly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__alagly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_anhgm_e
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid exchange
    - metabolites: !!omap
      - anhgm_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_anhgm_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_arab__L_e
    - name: L-Arabinose exchange
    - metabolites: !!omap
      - arab__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arab__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_arbt_e
    - name: Exchange of hydroquinone O-beta-D-glucopyranoside.
    - metabolites: !!omap
      - arbt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arbt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_arg__L_e
    - name: Exchange of L-argininium(1+).
    - metabolites: !!omap
      - arg__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arg__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ascb__L_e
    - name: L-Ascorbate exchange
    - metabolites: !!omap
      - ascb__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ascb__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_asn__L_e
    - name: Exchange of L-asparagine zwitterion.
    - metabolites: !!omap
      - asn__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_asn__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_aso3_e_1
    - name: EX_aso3_e
    - metabolites: !!omap
      - aso3_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_aso3_e_1
      - sbo: SBO:0000627
  - !!omap
    - id: EX_arsna_e_1
    - name: Exchange of arsenate(2-).
    - metabolites: !!omap
      - arsna_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_arsna_e_1
      - sbo: SBO:0000627
  - !!omap
    - id: EX_asp__D_e
    - name: Exchange of D-aspartate(1-).
    - metabolites: !!omap
      - asp__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_asp__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_asp__L_e
    - name: Exchange of L-aspartate(1-).
    - metabolites: !!omap
      - asp__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_asp__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__balaala_e
    - name: EX_balaala_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaala_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__balaala_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__balabala_e
    - name: EX_balabala_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balabala_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__balabala_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__balagly_e
    - name: EX_balagly_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balagly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__balagly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__balaleu_e
    - name: EX_balaleu_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaleu_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__balaleu_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__balamd_e
    - name: EX_balamd_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balamd_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__balamd_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_btn_e
    - name: Exchange of biotinate.
    - metabolites: !!omap
      - btn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_btn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_bz_e
    - name: Exchange of benzoate.
    - metabolites: !!omap
      - bz_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_bz_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ca2_e
    - name: Exchange of calcium(2+).
    - metabolites: !!omap
      - ca2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ca2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_carn_e
    - name: Exchange of carnosine zwitterion.
    - metabolites: !!omap
      - carn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_carn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cd2_e
    - name: Exchange of cadmium(2+).
    - metabolites: !!omap
      - cd2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cd2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cellb_e
    - name: Exchange of cellobiose.
    - metabolites: !!omap
      - cellb_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cellb_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cgly_e
    - name: Exchange of L-cysteinylglycine zwitterion.
    - metabolites: !!omap
      - cgly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cgly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_chol_e
    - name: Exchange of choline.
    - metabolites: !!omap
      - chol_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_chol_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_chols_e
    - name: Exchange of choline sulfate.
    - metabolites: !!omap
      - chols_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_chols_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cit_e
    - name: Exchange of citrate(3-).
    - metabolites: !!omap
      - cit_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cit_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cl_e
    - name: Chloride exchange
    - metabolites: !!omap
      - cl_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cl_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_co2_e
    - name: Exchange of carbon dioxide.
    - metabolites: !!omap
      - co2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_co2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_co_e
    - name: Carbon monoxide exchange
    - metabolites: !!omap
      - co_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_co_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cobalt2_e
    - name: Exchange of cobalt(2+).
    - metabolites: !!omap
      - cobalt2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cobalt2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cu2_e
    - name: Exchange of copper(2+).
    - metabolites: !!omap
      - cu2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cu2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_cys__L_e
    - name: Exchange of L-cysteine zwitterion.
    - metabolites: !!omap
      - cys__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_cys__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__d23hb_e
    - name: EX_d23hb_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__d23hb_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__d23hb_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__dachi_e
    - name: EX_dachi_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dachi_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__dachi_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_dcyt_e
    - name: Exchange of 2'-deoxycytidine.
    - metabolites: !!omap
      - dcyt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_dcyt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_drib_e
    - name: Exchange of 2-deoxy-D-ribofuranose.
    - metabolites: !!omap
      - drib_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_drib_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fad_e_1
    - name: EX_fad_e
    - metabolites: !!omap
      - fad_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fad_e_1
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fe2_e
    - name: Exchange of iron(2+).
    - metabolites: !!omap
      - fe2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fe2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fe3_e
    - name: Exchange of iron(3+).
    - metabolites: !!omap
      - fe3_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fe3_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__fe3mcbtt_e
    - name: EX_fe3mcbtt_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fe3mcbtt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__fe3mcbtt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__fe3pyovd_kt_e
    - name: EX_fe3pyovd_kt_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fe3pyovd_kt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__fe3pyovd_kt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fmn_e_1
    - name: EX_fmn_e
    - metabolites: !!omap
      - fmn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fmn_e_1
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fol_e
    - name: Exchange of folate(2-).
    - metabolites: !!omap
      - fol_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fol_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fru_e
    - name: Exchange of beta-D-fructofuranose.
    - metabolites: !!omap
      - fru_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fru_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_fcl__L_e
    - name: Exchange of L-fuculose.
    - metabolites: !!omap
      - fcl__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_fcl__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gal_bD_e
    - name: Exchange of beta-D-galactose.
    - metabolites: !!omap
      - gal_bD_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gal_bD_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gal_e
    - name: Exchange of alpha-D-galactose.
    - metabolites: !!omap
      - gal_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gal_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_galam_e_1
    - name: Exchange of 2-ammonio-2-deoxy-D-galactopyranose.
    - metabolites: !!omap
      - galam_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galam_e_1
      - sbo: SBO:0000627
  - !!omap
    - id: EX_galt_e
    - name: Exchange of galactitol.
    - metabolites: !!omap
      - galt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_galt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gam_e
    - name: Exchange of 2-ammonio-2-deoxy-D-glucopyranose.
    - metabolites: !!omap
      - gam_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gam_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glc__D_e
    - name: Exchange of D-glucopyranose.
    - metabolites: !!omap
      - glc__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glc__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__glc_aD_e
    - name: EX_glc__aD_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glc_aD_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__glc_aD_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gln__L_e
    - name: Exchange of L-glutamine zwitterion.
    - metabolites: !!omap
      - gln__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gln__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glu__L_e
    - name: Exchange of L-glutamate(1-).
    - metabolites: !!omap
      - glu__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_asn__L_e
    - name: EX_gly_asn__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_asn__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_asn__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_asp__L_e
    - name: EX_gly_asp__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_asp__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_asp__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_cys_e
    - name: EX_gly_cys_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_cys_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_cys_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gly_e
    - name: Exchange of glycine zwitterion.
    - metabolites: !!omap
      - gly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_gln_e
    - name: EX_gly_gln_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_gln_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_gln_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_glu__L_e
    - name: EX_gly_glu__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_glu__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_glu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_leu_e
    - name: EX_gly_leu_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_leu_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_leu_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_met_e
    - name: EX_gly_met_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_met_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_met_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_phe_e
    - name: EX_gly_phe_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_phe_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_phe_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_pro__L_e
    - name: EX_gly_pro__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_pro__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_pro__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__gly_tyr_e
    - name: EX_gly_tyr_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_tyr_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__gly_tyr_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glyb_e
    - name: Exchange of glycine betaine.
    - metabolites: !!omap
      - glyb_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyb_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_glyclt_e
    - name: Exchange of glycolate.
    - metabolites: !!omap
      - glyclt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_glyclt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__glyglygln_e
    - name: EX_glyglygln_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glyglygln_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__glyglygln_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gthrd_e
    - name: Exchange of glutathionate(1-).
    - metabolites: !!omap
      - gthrd_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gthrd_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_gua_e
    - name: Exchange of guanine.
    - metabolites: !!omap
      - gua_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_gua_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_h2_e
    - name: Exchange of dihydrogen.
    - metabolites: !!omap
      - h2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_h2o_e
    - name: Exchange of water.
    - metabolites: !!omap
      - h2o_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2o_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_h2s_e
    - name: Hydrogen sulfide exchange
    - metabolites: !!omap
      - h2s_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h2s_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_h_e
    - name: Exchange of hydron.
    - metabolites: !!omap
      - h_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_h_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ham_e
    - name: Exchange of hydroxylamine.
    - metabolites: !!omap
      - ham_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ham_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_his__L_e
    - name: Exchange of L-histidine zwitterion.
    - metabolites: !!omap
      - his__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_his__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_hqn_e
    - name: Exchange of hydroquinone.
    - metabolites: !!omap
      - hqn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hqn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_hxan_e
    - name: Exchange of hypoxanthine.
    - metabolites: !!omap
      - hxan_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_hxan_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ile__L_e
    - name: Exchange of L-isoleucine zwitterion.
    - metabolites: !!omap
      - ile__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ile__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_inost_e
    - name: Exchange of myo-inositol.
    - metabolites: !!omap
      - inost_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_inost_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__istfrnA_e
    - name: EX_istfrnA_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__istfrnA_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__istfrnA_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__istfrnB_e
    - name: EX_istfrnB_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__istfrnB_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__istfrnB_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_isetac_e
    - name: Exchange of isethionate.
    - metabolites: !!omap
      - isetac_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_isetac_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_k_e
    - name: Exchange of potassium(1+).
    - metabolites: !!omap
      - k_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_k_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_lac__L_e
    - name: Exchange of (S)-lactate.
    - metabolites: !!omap
      - lac__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lac__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_lcts_e
    - name: Exchange of lactose.
    - metabolites: !!omap
      - lcts_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lcts_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_leu__L_e
    - name: Exchange of L-leucine zwitterion.
    - metabolites: !!omap
      - leu__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_leu__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_lys__L_e
    - name: Exchange of L-lysinium(1+).
    - metabolites: !!omap
      - lys__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_lys__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__lysglugly_e
    - name: EX_lysglugly_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__lysglugly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__lysglugly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__madg_e
    - name: EX_madg_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__madg_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__madg_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mal__L_e
    - name: Exchange of (S)-malate(2-).
    - metabolites: !!omap
      - mal__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mal__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_malt_e
    - name: Exchange of maltose.
    - metabolites: !!omap
      - malt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_malt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_malthp_e
    - name: Exchange of alpha-maltoheptaose.
    - metabolites: !!omap
      - malthp_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_malthp_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_malthx_e
    - name: Exchange of alpha-maltohexaose.
    - metabolites: !!omap
      - malthx_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_malthx_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_malttr_e
    - name: Exchange of alpha-maltotriose.
    - metabolites: !!omap
      - malttr_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_malttr_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_man_e
    - name: Exchange of D-mannopyranose.
    - metabolites: !!omap
      - man_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_man_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_manglyc_e
    - name: Exchange of 2-(alpha-D-mannosyl)-D-glycerate.
    - metabolites: !!omap
      - manglyc_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_manglyc_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__mbdg_e
    - name: EX_mbdg_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__mbdg_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__mbdg_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__mcbtt_e
    - name: EX_mcbtt_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__mcbtt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__mcbtt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_meoh_e
    - name: Exchange of methanol.
    - metabolites: !!omap
      - meoh_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_meoh_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__met_L_ala__L_e
    - name: EX_met_L_ala__L_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__met_L_ala__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__met_L_ala__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_met__D_e
    - name: Exchange of D-methionine zwitterion.
    - metabolites: !!omap
      - met__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_met__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_met__L_e
    - name: Exchange of L-methionine zwitterion.
    - metabolites: !!omap
      - met__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_met__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_metox_e
    - name: R_L_Methionine_S_oxide_exchange
    - metabolites: !!omap
      - metox_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_metox_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_metsox_R__L_e
    - name: Exchange of L-methionine (R)-S-oxide zwitterion.
    - metabolites: !!omap
      - metsox_R__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_metsox_R__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_metsox_S__L_e
    - name: Exchange of L-methionine (S)-S-oxide zwitterion.
    - metabolites: !!omap
      - metsox_S__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_metsox_S__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mg2_e
    - name: Exchange of magnesium(2+).
    - metabolites: !!omap
      - mg2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mg2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mn2_e
    - name: Exchange of manganese(2+).
    - metabolites: !!omap
      - mn2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mn2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mnl_e
    - name: Exchange of D-mannitol.
    - metabolites: !!omap
      - mnl_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mnl_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mso3_e
    - name: Exchange of methanesulfonate.
    - metabolites: !!omap
      - mso3_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mso3_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_mththf_e
    - name: Exchange of (2R,4S)-2-methyltetrahydrofuran-2,3,3,4-tetrol.
    - metabolites: !!omap
      - mththf_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_mththf_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_na1_e
    - name: Exchange of sodium(1+).
    - metabolites: !!omap
      - na1_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_na1_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_nh4_e
    - name: Exchange of ammonium.
    - metabolites: !!omap
      - nh4_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_nh4_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ni2_e
    - name: Exchange of nickel(2+).
    - metabolites: !!omap
      - ni2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ni2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_no3_e
    - name: Exchange of nitrate.
    - metabolites: !!omap
      - no3_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_no3_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_o2_e
    - name: Exchange of dioxygen.
    - metabolites: !!omap
      - o2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_o2_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_phe__L_e
    - name: Exchange of L-phenylalanine zwitterion.
    - metabolites: !!omap
      - phe__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_phe__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pheme_e
    - name: Exchange of ferroheme b(2-).
    - metabolites: !!omap
      - pheme_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pheme_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pi_e
    - name: Exchange of hydrogenphosphate.
    - metabolites: !!omap
      - pi_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pi_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ppap_e
    - name: Exchange of propanoyl phosphate(2-).
    - metabolites: !!omap
      - ppap_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ppap_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ppt_e_1
    - name: Exchange of phosphorous acid.
    - metabolites: !!omap
      - ppt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ppt_e_1
      - sbo: SBO:0000627
  - !!omap
    - id: EX_pro__L_e
    - name: Exchange of L-proline zwitterion.
    - metabolites: !!omap
      - pro__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_pro__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_progly_e
    - name: Exchange of L-prolinylglycine zwitterion.
    - metabolites: !!omap
      - progly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_progly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__prohisglu_e
    - name: EX_prohisglu_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__prohisglu_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__prohisglu_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ptrc_e
    - name: Exchange of 1,4-butanediammonium.
    - metabolites: !!omap
      - ptrc_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ptrc_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__pyovd_kt_e
    - name: EX_pyovd_kt_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pyovd_kt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__pyovd_kt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_raffin_e
    - name: Exchange of raffinose.
    - metabolites: !!omap
      - raffin_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_raffin_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_rib__D_e
    - name: Exchange of D-ribofuranose.
    - metabolites: !!omap
      - rib__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_rib__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__ribflv_e
    - name: EX_ribflv_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ribflv_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__ribflv_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_s_e
    - name: Exchange of sulfur atom.
    - metabolites: !!omap
      - s_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_s_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_salcn_e
    - name: Exchange of salicin.
    - metabolites: !!omap
      - salcn_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_salcn_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_sbt__D_e
    - name: Exchange of D-glucitol.
    - metabolites: !!omap
      - sbt__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sbt__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_sel_e
    - name: Exchange of selenate.
    - metabolites: !!omap
      - sel_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sel_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ser__D_e
    - name: Exchange of D-serine zwitterion.
    - metabolites: !!omap
      - ser__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ser__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ser__L_e
    - name: Exchange of L-serine zwitterion.
    - metabolites: !!omap
      - ser__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ser__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__serglugly_e
    - name: EX_serglugly_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__serglugly_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__serglugly_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_slnt_e
    - name: Exchange of selenite(2-).
    - metabolites: !!omap
      - slnt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_slnt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_so4_e
    - name: Exchange of sulfate.
    - metabolites: !!omap
      - so4_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_so4_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_spmd_e
    - name: Exchange of spermidine(3+).
    - metabolites: !!omap
      - spmd_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_spmd_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_stfrnA_e
    - name: EX_stfrnA_e
    - metabolites: !!omap
      - stfrnA_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_stfrnA_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__stfrnB_e
    - name: EX_stfrnB_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__stfrnB_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__stfrnB_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_sucr_e
    - name: Exchange of sucrose.
    - metabolites: !!omap
      - sucr_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_sucr_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX___iPKB_Clostridiaceae__tgt_e
    - name: EX_tgt_e
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tgt_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX___iPKB_Clostridiaceae__tgt_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_thr__L_e
    - name: Exchange of L-threonine zwitterion.
    - metabolites: !!omap
      - thr__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thr__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_thym_e
    - name: Exchange of thymine.
    - metabolites: !!omap
      - thym_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_thym_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tmam_e
    - name: Exchange of trimethylammonium.
    - metabolites: !!omap
      - tmam_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tmam_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tre_e
    - name: Exchange of alpha,alpha-trehalose.
    - metabolites: !!omap
      - tre_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tre_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_trp__L_e
    - name: Exchange of L-tryptophan zwitterion.
    - metabolites: !!omap
      - trp__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_trp__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_tyr__L_e
    - name: Exchange of L-tyrosine zwitterion.
    - metabolites: !!omap
      - tyr__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_tyr__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_ura_e
    - name: Exchange of uracil.
    - metabolites: !!omap
      - ura_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_ura_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_urea_e
    - name: Exchange of urea.
    - metabolites: !!omap
      - urea_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_urea_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_val__L_e
    - name: Exchange of L-valine zwitterion.
    - metabolites: !!omap
      - val__L_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_val__L_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_xan_e
    - name: Xanthine exchange
    - metabolites: !!omap
      - xan_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xan_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_xyl__D_e
    - name: Exchange of D-xylopyranose.
    - metabolites: !!omap
      - xyl__D_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_xyl__D_e
      - sbo: SBO:0000627
  - !!omap
    - id: EX_zn2_e
    - name: Exchange of zinc(2+).
    - metabolites: !!omap
      - zn2_e: -1
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Extracellular exchange
    - annotation: !!omap
      - biggr: EX_zn2_e
      - sbo: SBO:0000627
  - !!omap
    - id: 12DGR160tipp
    - name: 1,2 diacylglycerol transport via flipping (periplasm to cytoplasm, 
        n-C16:0)
    - metabolites: !!omap
      - 12dgr160_c: 1.0
      - 12dgr160_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: 12DGR160tipp
      - sbo: SBO:0000655
  - !!omap
    - id: 13PPDH
    - name: 1,3-propanediol dehydrogenase (reversible)
    - metabolites: !!omap
      - 13ppd_c: 1.0
      - 3hppnl_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02090
    - annotation: !!omap
      - biggr: 13PPDH
      - rhea: RHEA:23188
      - sbo: SBO:0000176
  - !!omap
    - id: 13PPDH2
    - name: 1,3-propanediol dehydrogenase
    - metabolites: !!omap
      - 13ppd_c: 1.0
      - 3hppnl_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03370
    - annotation: !!omap
      - biggr: 13PPDH2
      - rhea: RHEA:35599
      - sbo: SBO:0000176
  - !!omap
    - id: 13PPDH2_1
    - name: 1,3-propanediol dehydrogenase
    - metabolites: !!omap
      - 13ppd_c: 1.0
      - h_c: -1.0
      - lald__L_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03735
    - annotation: !!omap
      - biggr: 13PPDH2_1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__24DECOAR
    - name: 2 4 dienoyl CoA reductase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dec4_2_coa_c: -1.0
      - dc2coa_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_20400
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__24DECOAR
      - sbo: SBO:0000176
  - !!omap
    - id: 2HXMPt6
    - name: R_2__hydroxymethyl_phenol_transport_inout_via_proton_symport
    - metabolites: !!omap
      - 2hxmp_c:0: 1.0
      - 2hxmp_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: 2HXMPt6
      - sbo: SBO:0000655
  - !!omap
    - id: 2MAHMP
    - name: 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphatase
    - metabolites: !!omap
      - 2mahmp_c: -1.0
      - 4ampm_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02965 or CLOINNGCF_022845735_19995
    - annotation: !!omap
      - biggr: 2MAHMP
      - rhea: RHEA:27914
      - sbo: SBO:0000176
  - !!omap
    - id: 2PGLYCt6
    - name: R_2_Phosphoglycolate_transport_inout_via_proton_symport
    - metabolites: !!omap
      - 2pglyc_c: 1.0
      - 2pglyc_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: 2PGLYCt6
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__3PEPTabcpp
    - name: Tripeptide (LalaDgluMdap) transport via ABC system (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__LalaDgluMdap_c: 1.0
      - __iPKB_Clostridiaceae__LalaDgluMdap_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17000 or 
        (CLOINNGCF_022845735_03610 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03625) or (CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03620 and CLOINNGCF_022845735_03625 and 
        CLOINNGCF_022845735_06210)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__3PEPTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 4HALDD
    - name: R_aldehyde_dehydrogenase__4_hydroxyphenylacetaldehyde__NAD_
    - metabolites: !!omap
      - 4hoxpacd_c: -1.0
      - 4hphac_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: 4HALDD
      - rhea: RHEA:17273
      - sbo: SBO:0000176
  - !!omap
    - id: 4HBAt
    - name: MNXR68734
    - metabolites: !!omap
      - 4hba_c: 1.0
      - 4hba_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: 4HBAt
      - sbo: SBO:0000655
  - !!omap
    - id: 4HTHRK
    - name: 4-Hydroxy-L-threonine kinase
    - metabolites: !!omap
      - 4hthr_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - phthr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: 4HTHRK
      - rhea: RHEA:28787
      - sbo: SBO:0000176
  - !!omap
    - id: 4HTHRS
    - name: 4-Hydroxy-L-threonine synthase
    - metabolites: !!omap
      - 4hthr_c: 1.0
      - h2o_c: -1.0
      - phthr_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19765
    - annotation: !!omap
      - biggr: 4HTHRS
      - rhea: RHEA:30659
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__4PCP
    - name: Tetrapeptide L,D-carboxypeptidase
    - metabolites: !!omap
      - LalaDgluMdapDala_c: -1.0
      - __iPKB_Clostridiaceae__LalaDgluMdap_c: 1.0
      - ala__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__4PCP
      - sbo: SBO:0000176
  - !!omap
    - id: 4PEPTabcpp
    - name: tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm)
    - metabolites: !!omap
      - LalaDgluMdapDala_c: 1.0
      - LalaDgluMdapDala_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17000 or 
        (CLOINNGCF_022845735_03610 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03625) or (CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03620 and CLOINNGCF_022845735_03625 and 
        CLOINNGCF_022845735_06210)
    - annotation: !!omap
      - biggr: 4PEPTabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: 5DGLCN_Et
    - name: 5-Dehydro-D-gluconate transport (transport mechanism unknown - 
        evidence from biolog data)
    - metabolites: !!omap
      - 5dglcn_c: 1.0
      - 5dglcn_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: 5DGLCN_Et
      - sbo: SBO:0000655
  - !!omap
    - id: 5DKGR
    - name: 5-keto-D-gluconate 5-reductase
    - metabolites: !!omap
      - 5dglcn_c: 1.0
      - glcn_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05905
    - annotation: !!omap
      - biggr: 5DKGR
      - rhea: RHEA:23940
      - sbo: SBO:0000176
  - !!omap
    - id: 5DOAN
    - name: 5'-deoxyadenosine nuclosidase
    - metabolites: !!omap
      - 5drib_c: 1.0
      - ade_c: 1.0
      - dad_5_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11835
    - annotation: !!omap
      - biggr: 5DOAN
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__6PGALSZ_1
    - name: 6-phospho-beta-galactosidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dgal6p_c: 1.0
      - __iPKB_Clostridiaceae__lac6p_c: -1.0
      - glc__bD_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19105
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__6PGALSZ_1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__6PHBG
    - name: 6-phospho-beta-glucosidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2hxmp_DUP1_c: 1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
      - salcn6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__6PHBG
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__6PHBG2
    - name: Salicin 6-phosphate glucohydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2hxmp_DUP1_c: 1.0
      - g6p_B_c: 1.0
      - h2o_c: -1.0
      - salcn6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__6PHBG2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__6PHBG_2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cellb6p_c: -1.0
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01055 or CLOINNGCF_022845735_09615
        or CLOINNGCF_022845735_10950 or CLOINNGCF_022845735_14665
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__6PHBG_2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__A6PAG
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dgal6p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - gal_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05965
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__A6PAG
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__A6PAG2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dgal6p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - gal_bD_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05965
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__A6PAG2
      - sbo: SBO:0000176
  - !!omap
    - id: AB6PGH
    - name: Arbutin 6-phosphate glucohydrolase
    - metabolites: !!omap
      - arbt6p_c: -1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
      - hqn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02350 or CLOINNGCF_022845735_03680
        or CLOINNGCF_022845735_09615 or CLOINNGCF_022845735_10950 or 
        CLOINNGCF_022845735_19895 or CLOINNGCF_022845735_21315 or 
        (CLOINNGCF_022845735_09615 and CLOINNGCF_022845735_19895)
    - annotation: !!omap
      - biggr: AB6PGH
      - sbo: SBO:0000176
  - !!omap
    - id: AB6PGH_1
    - name: Arbutin 6-phosphate glucohydrolase
    - metabolites: !!omap
      - arbt6p_c: -1.0
      - g6p_B_c: 1.0
      - h2o_c: -1.0
      - hqn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03680
    - annotation: !!omap
      - biggr: AB6PGH_1
      - rhea: RHEA:28510
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ABFPT2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fru_B_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - f6p_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ABFPT2
      - sbo: SBO:0000176
  - !!omap
    - id: ABUTD
    - name: Aminobutyraldehyde dehydrogenase
    - metabolites: !!omap
      - 4abut_c: 1.0
      - 4abutn_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: ABUTD
      - rhea: RHEA:19105
      - sbo: SBO:0000176
  - !!omap
    - id: ACACCT
    - name: acetyl-CoA:acetoacetyl-CoA transferase
    - metabolites: !!omap
      - aacoa_c: 1.0
      - ac_c: 1.0
      - acac_c: -1.0
      - accoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23275
    - annotation: !!omap
      - biggr: ACACCT
      - rhea: RHEA:27806
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT1r
    - name: acetyl-CoA C-acetyltransferase
    - metabolites: !!omap
      - aacoa_c: 1.0
      - accoa_c: -2.0
      - coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13880 or CLOINNGCF_022845735_13885
    - annotation: !!omap
      - biggr: ACACT1r
      - rhea: RHEA:21036
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACACT5r_1
    - name: Acetyl CoA C acyltransferase  decanoyl CoA
    - metabolites: !!omap
      - 3oddcoa_c: 1.0
      - __iPKB_Clostridiaceae__dccoa_c: -1.0
      - accoa_c: -1.0
      - coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACACT5r_1
      - sbo: SBO:0000176
  - !!omap
    - id: ACACT12
    - name: acetyl-CoA C-acyltransferase (tetradecanoyl-CoA) (r)
    - metabolites: !!omap
      - 3ohdcoa_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - tdcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ACACT12
      - rhea: RHEA:18161
      - sbo: SBO:0000176
  - !!omap
    - id: ACALD
    - name: acetaldehyde dehydrogenase (acetylating)
    - metabolites: !!omap
      - acald_c: -1.0
      - accoa_c: 1.0
      - coa_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02090 or CLOINNGCF_022845735_23495
    - annotation: !!omap
      - biggr: ACALD
      - rhea: RHEA:23288
      - sbo: SBO:0000176
  - !!omap
    - id: ACALDt
    - name: acetaldehyde reversible transport
    - metabolites: !!omap
      - acald_c: 1.0
      - acald_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: ACALDt
      - sbo: SBO:0000655
  - !!omap
    - id: ACCOAC
    - name: acetyl-CoA carboxylase
    - metabolites: !!omap
      - accoa_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2co3_c:-1: -1.0
      - h_c: 1.0
      - malcoa_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16860 or CLOINNGCF_022845735_16865
        or (CLOINNGCF_022845735_16850 and CLOINNGCF_022845735_16855) or 
        (CLOINNGCF_022845735_16850 and CLOINNGCF_022845735_16860) or 
        (CLOINNGCF_022845735_16855 and CLOINNGCF_022845735_16860 and 
        CLOINNGCF_022845735_16865) or (CLOINNGCF_022845735_06075 and 
        CLOINNGCF_022845735_16850 and CLOINNGCF_022845735_16855 and 
        CLOINNGCF_022845735_16860) or (CLOINNGCF_022845735_06075 and 
        CLOINNGCF_022845735_16855 and CLOINNGCF_022845735_16860 and 
        CLOINNGCF_022845735_16865) or (CLOINNGCF_022845735_16850 and 
        CLOINNGCF_022845735_16855 and CLOINNGCF_022845735_16860 and 
        CLOINNGCF_022845735_16865)
    - annotation: !!omap
      - biggr: ACCOAC
      - rhea: RHEA:11308
      - sbo: SBO:0000176
  - !!omap
    - id: ACGAMK
    - name: N-acetylglucosamine kinase
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acgam_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18330
    - annotation: !!omap
      - biggr: ACGAMK
      - rhea: RHEA:17417
      - sbo: SBO:0000176
  - !!omap
    - id: ACGApts
    - name: N-Acetyl-D-glucosamine transport via PEP:Pyr PTS
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acgam_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19025 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945 and 
        CLOINNGCF_022845735_23940)
    - annotation: !!omap
      - biggr: ACGApts
      - sbo: SBO:0000655
  - !!omap
    - id: ACGK
    - name: acetylglutamate kinase
    - metabolites: !!omap
      - acg5p_c: 1.0
      - acglu_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13740
    - annotation: !!omap
      - biggr: ACGK
      - rhea: RHEA:14629
      - sbo: SBO:0000176
  - !!omap
    - id: ACGS
    - name: N-acetylglutamate synthase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acglu_c: 1.0
      - coa_c: 1.0
      - glu__L_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13745
    - annotation: !!omap
      - biggr: ACGS
      - rhea: RHEA:24292
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACHBS
    - name: 2-aceto-2-hydroxybutanoate synthase
    - metabolites: !!omap
      - 2obut_c: -1.0
      - __iPKB_Clostridiaceae__2ahbut_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10915 or CLOINNGCF_022845735_23460
        or CLOINNGCF_022845735_23465 or (CLOINNGCF_022845735_10915 and 
        CLOINNGCF_022845735_23460) or (CLOINNGCF_022845735_23460 and 
        CLOINNGCF_022845735_23465)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACHBS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACHBS2
    - name: 2-aceto-2-hydroxybutanoate synthase
    - metabolites: !!omap
      - 2obut_c: -1.0
      - __iPKB_Clostridiaceae__2ahbut_c: 1.0
      - __iPKB_Clostridiaceae__2hetdp_c: -1.0
      - h_c: 1.0
      - thmpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10920
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACHBS2
      - sbo: SBO:0000176
  - !!omap
    - id: ACKr
    - name: acetate kinase
    - metabolites: !!omap
      - ac_c: -1.0
      - actp_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13505
    - annotation: !!omap
      - biggr: ACKr
      - rhea: RHEA:11352
      - sbo: SBO:0000176
  - !!omap
    - id: ACLS
    - name: acetolactate synthase
    - metabolites: !!omap
      - alac__S_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pyr_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10915 or CLOINNGCF_022845735_23460
        or CLOINNGCF_022845735_23465 or (CLOINNGCF_022845735_23460 and 
        CLOINNGCF_022845735_23465)
    - annotation: !!omap
      - biggr: ACLS
      - rhea: RHEA:25249
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACLSa_1
    - name: Pyruvate acetaldehydetransferase (decarboxylating)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2hetdp_c: 1.0
      - co2_c: 1.0
      - h_c: -2.0
      - pyr_c: -1.0
      - thmpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10920
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACLSa_1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACLSb_1
    - name: Acetolactate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2hetdp_c: -1.0
      - alac__S_c: 1.0
      - h_c: 1.0
      - pyr_c: -1.0
      - thmpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10920
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACLSb_1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACMANApts
    - name: N-acetyl-D-mannosamine transport via PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acmanap_c: 1.0
      - acmana_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14730 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACMANApts
      - sbo: SBO:0000655
  - !!omap
    - id: ACNAMt2
    - name: N-acetylneuraminate proton symport
    - metabolites: !!omap
      - acnam_c: 1.0
      - acnam_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: ACNAMt2
      - sbo: SBO:0000655
  - !!omap
    - id: ACNPLYS
    - name: N-Acetylneuraminate pyruvate-lyase
    - metabolites: !!omap
      - acmana_c: -1.0
      - acnam_c: 1.0
      - h2o_c: -1.0
      - pep_c: -1.0
      - pi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ACNPLYS
      - sbo: SBO:0000176
  - !!omap
    - id: ACOAD1
    - name: acyl-CoA dehydrogenase (butanoyl-CoA)
    - metabolites: !!omap
      - b2coa_c: -1.0
      - btcoa_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06845
    - annotation: !!omap
      - biggr: ACOAD1
      - rhea: RHEA:52572
      - sbo: SBO:0000176
  - !!omap
    - id: ACOAD1f
    - name: acyl-CoA dehydrogenase (butanoyl-CoA)
    - metabolites: !!omap
      - b2coa_c: 1.0
      - btcoa_c: -1.0
      - fad_c: -1.0
      - fadh2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ACOAD1f:3
      - rhea: RHEA:30731
      - sbo: SBO:0000176
  - !!omap
    - id: ACOAD1f:2
    - name: acyl-CoA dehydrogenase (butanoyl-CoA)
    - metabolites: !!omap
      - b2coa_c: -1.0
      - btcoa_c: 1.0
      - fad_c: 1.0
      - fadh2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13865 or CLOINNGCF_022845735_13870
        or CLOINNGCF_022845735_13875
    - annotation: !!omap
      - biggr: ACOAD1f:3
      - rhea: RHEA:30731
      - sbo: SBO:0000176
  - !!omap
    - id: ACOAD2
    - name: acyl-CoA dehydrogenase (hexanoyl-CoA)
    - metabolites: !!omap
      - h_c: -1.0
      - hx2coa_c: -1.0
      - hxcoa_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06845
    - annotation: !!omap
      - biggr: ACOAD2
      - rhea: RHEA:52576
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACOAD3
    - name: Acyl-CoA dehydrogenase (octanoyl-CoA)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__oc2coa_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - octcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06845
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACOAD3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACOAD4_1
    - name: Acyl CoA dehydrogenase  decanoyl CoA
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dccoa_c: -1.0
      - dc2coa_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06845
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACOAD4_1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACOAD6
    - name: Acyl-CoA dehydrogenase (tetradecanoyl-CoA)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__td2coa_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - tdcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06845
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACOAD6
      - sbo: SBO:0000176
  - !!omap
    - id: ACOAD7
    - name: acyl-CoA dehydrogenase (hexadecanoyl-CoA)
    - metabolites: !!omap
      - h_c: 1.0
      - hdd2coa_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pmtcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06845
    - annotation: !!omap
      - biggr: ACOAD7
      - rhea: RHEA:46072
      - sbo: SBO:0000176
  - !!omap
    - id: ACOAD7f
    - name: acyl-CoA dehydrogenase (hexadecanoyl-CoA)
    - metabolites: !!omap
      - fad_c: -1.0
      - fadh2_c: 1.0
      - hdd2coa_c: 1.0
      - pmtcoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ACOAD7f:3
      - rhea: RHEA:30747
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACODA
    - name: Acetylornithine deacetylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__orn__L_DUP1_c: 1.0
      - ac_c: 1.0
      - acorn_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21065
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACODA
      - sbo: SBO:0000176
  - !!omap
    - id: ACONT
    - name: aconitase
    - metabolites: !!omap
      - cit_c: -1.0
      - icit_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16525
    - annotation: !!omap
      - biggr: ACONT
      - sbo: SBO:0000176
  - !!omap
    - id: ACONTa_1
    - name: aconitase (half-reaction A, Citrate hydro-lyase)
    - metabolites: !!omap
      - acon_c: 1.0
      - cit_c: -1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16525
    - annotation: !!omap
      - biggr: ACONTa_1
      - rhea: RHEA:10228
      - sbo: SBO:0000176
  - !!omap
    - id: ACONTb
    - name: aconitase (half-reaction B, Isocitrate hydro-lyase)
    - metabolites: !!omap
      - acon_c: -1.0
      - h2o_c: -1.0
      - icit_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16525
    - annotation: !!omap
      - biggr: ACONTb
      - sbo: SBO:0000176
  - !!omap
    - id: ACOTA
    - name: acetylornithine transaminase
    - metabolites: !!omap
      - acg5sa_c: 1.0
      - acorn_c: -1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13735
    - annotation: !!omap
      - biggr: ACOTA
      - rhea: RHEA:18049
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACP1_FMN
    - name: Acid phosphatase (FMN)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ribflv_c: 1.0
      - fmn_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02965 or CLOINNGCF_022845735_06305
        or CLOINNGCF_022845735_19990
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACP1_FMN
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ACSPHAC101
    - name: R 3 Hydroxyacid Acyl CoA Synthetase  C101
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R3hdec4coa_c: 1.0
      - __iPKB_Clostridiaceae__R3hdec4e_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ACSPHAC101
      - sbo: SBO:0000176
  - !!omap
    - id: ACTD
    - name: acetoin dehydrogenase
    - metabolites: !!omap
      - actn__R_c: -1.0
      - diact_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24715
    - annotation: !!omap
      - biggr: ACTD
      - rhea: RHEA:22900
      - sbo: SBO:0000176
  - !!omap
    - id: ACTD2
    - name: R_Acetoin_dehydrogenase
    - metabolites: !!omap
      - acald_c: 1.0
      - accoa_c: 1.0
      - actn__R_c: -1.0
      - coa_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03605 or CLOINNGCF_022845735_06805
    - annotation: !!omap
      - biggr: ACTD2
      - sbo: SBO:0000176
  - !!omap
    - id: ACTD:2
    - name: acetoin dehydrogenase
    - metabolites: !!omap
      - actn__R_c: 1.0
      - diact_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16825
    - annotation: !!omap
      - biggr: ACTD
      - rhea: RHEA:22900
      - sbo: SBO:0000176
  - !!omap
    - id: ACTDa
    - name: Acetoin dehydrogenase
    - metabolites: !!omap
      - actn__R_c: -1.0
      - diact_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24715
    - annotation: !!omap
      - biggr: ACTDa
      - sbo: SBO:0000176
  - !!omap
    - id: ACTNabc
    - name: R_acetoin_transport_via_ABC_system
    - metabolites: !!omap
      - actn__R_c: 1.0
      - actn__R_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11175 or 
        (CLOINNGCF_022845735_02005 and CLOINNGCF_022845735_03155 and 
        CLOINNGCF_022845735_15735)
    - annotation: !!omap
      - biggr: ACTNabc
      - sbo: SBO:0000655
  - !!omap
    - id: ACTNabc1
    - name: R_acetoin_efflux__via_ABC_system
    - metabolites: !!omap
      - actn__R_c: -1.0
      - actn__R_e: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02005 and 
        CLOINNGCF_022845735_03155 and CLOINNGCF_022845735_15735
    - annotation: !!omap
      - biggr: ACTNabc1
      - sbo: SBO:0000655
  - !!omap
    - id: ADADir
    - name: R_deoxycytidine_kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dcmp_c: 1.0
      - dcyt_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: ADADir
      - rhea: RHEA:46040
      - sbo: SBO:0000176
  - !!omap
    - id: APTA1i
    - name: R_Acetyl_L_L_diaminopimelate_aminotransferase
    - metabolites: !!omap
      - 26dapime_c: 1.0
      - acamoxm_c: -1.0
      - akg_c: 1.0
      - glu__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: APTA1i
      - rhea: RHEA:25315
      - sbo: SBO:0000176
  - !!omap
    - id: ADCL
    - name: 4-aminobenzoate synthase
    - metabolites: !!omap
      - 4abz_c: 1.0
      - 4adcho_c: -1.0
      - h_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13585
    - annotation: !!omap
      - biggr: ADCL
      - rhea: RHEA:16201
      - sbo: SBO:0000176
  - !!omap
    - id: ADCS
    - name: 4-amino-4-deoxychorismate synthase
    - metabolites: !!omap
      - 4adcho_c: 1.0
      - chor_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21160
    - annotation: !!omap
      - biggr: ADCS
      - rhea: RHEA:11672
      - sbo: SBO:0000176
  - !!omap
    - id: ADD
    - name: adenine deaminase
    - metabolites: !!omap
      - ade_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - hxan_c: 1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21505 or CLOINNGCF_022845735_24780
    - annotation: !!omap
      - biggr: ADD
      - rhea: RHEA:23688
      - sbo: SBO:0000176
  - !!omap
    - id: ADEt2rpp
    - name: adenine transport via proton symport (reversible) (periplasm)
    - metabolites: !!omap
      - ade_c: 1.0
      - ade_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07060
    - annotation: !!omap
      - biggr: ADEt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: ADEtex
    - name: adenine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - ade_e: -1.0
      - ade_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ADEtex
      - sbo: SBO:0000655
  - !!omap
    - id: ADK1
    - name: adenylate kinase
    - metabolites: !!omap
      - adp_c: 2.0
      - amp_c: -1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: ADK1
      - rhea: RHEA:12973
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ADK2
    - name: Adenylate kinase (Inorganic triphosphate)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pppi_c: -1.0
      - adp_c: 1.0
      - amp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ADK2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ADK2:2
    - name: Adenylate kinase (Inorganic triphosphate)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pppi_c: -1.0
      - adp_c: 1.0
      - amp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ADK2
      - sbo: SBO:0000176
  - !!omap
    - id: ADK3
    - name: adentylate kinase (GTP)
    - metabolites: !!omap
      - adp_c: 1.0
      - amp_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: ADK3
      - rhea: RHEA:29863
      - sbo: SBO:0000176
  - !!omap
    - id: ADK4
    - name: adentylate kinase (ITP)
    - metabolites: !!omap
      - adp_c: 1.0
      - amp_c: -1.0
      - idp_c: 1.0
      - itp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: ADK4
      - rhea: RHEA:29867
      - sbo: SBO:0000176
  - !!omap
    - id: ADKd
    - name: adenylate kinase (d form)
    - metabolites: !!omap
      - dadp_c: 2.0
      - damp_c: -1.0
      - datp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: ADKd
      - rhea: RHEA:78311
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ADMDC
    - name: Adenosylmethionine decarboxylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ametam_c: 1.0
      - amet_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ADMDC
      - sbo: SBO:0000176
  - !!omap
    - id: ADNCYC
    - name: adenylate cyclase
    - metabolites: !!omap
      - atp_c: -1.0
      - camp_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00075 or CLOINNGCF_022845735_09630
    - annotation: !!omap
      - biggr: ADNCYC
      - rhea: RHEA:15389
      - sbo: SBO:0000176
  - !!omap
    - id: ADNK1
    - name: adenosine kinase
    - metabolites: !!omap
      - adn_c: -1.0
      - adp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: ADNK1
      - rhea: RHEA:20824
      - sbo: SBO:0000176
  - !!omap
    - id: ADNUC
    - name: adenosine hydrolase
    - metabolites: !!omap
      - ade_c: 1.0
      - adn_c: -1.0
      - h2o_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21765
    - annotation: !!omap
      - biggr: ADNUC
      - rhea: RHEA:18669
      - sbo: SBO:0000176
  - !!omap
    - id: ADPGLC
    - name: ADPglucose diphosphatase
    - metabolites: !!omap
      - adpglc_c: -1.0
      - amp_c: 1.0
      - g1p_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ADPGLC
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ADPRDP
    - name: ADPribose diphosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: 1.0
      - adprib_c: -1.0
      - amp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05570 or CLOINNGCF_022845735_09275
        or CLOINNGCF_022845735_13165
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ADPRDP
      - sbo: SBO:0000176
  - !!omap
    - id: ADPT
    - name: adenine phosphoribosyltransferase
    - metabolites: !!omap
      - ade_c: -1.0
      - amp_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13380
    - annotation: !!omap
      - biggr: ADPT
      - rhea: RHEA:16609
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ADSL1r
    - name: Adenylsuccinate lyase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dcamp_c: -1.0
      - amp_c: 1.0
      - fum_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12745
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ADSL1r
      - sbo: SBO:0000176
  - !!omap
    - id: ADSL2r
    - name: adenylosuccinate lyase
    - metabolites: !!omap
      - 25aics_c: -1.0
      - aicar_c: 1.0
      - fum_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12745
    - annotation: !!omap
      - biggr: ADSL2r
      - rhea: RHEA:23920
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ADSS
    - name: Adenylosuccinate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dcamp_c: 1.0
      - asp__L_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 2.0
      - imp_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12725
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ADSS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AEPPYRTA
    - name: 2 aminoethylphosphonate pyruvate transaminase
    - metabolites: !!omap
      - 2ameph_c: -1.0
      - __iPKB_Clostridiaceae__Pald_c: 1.0
      - ala__L_c: 1.0
      - h_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04270
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AEPPYRTA
      - sbo: SBO:0000176
  - !!omap
    - id: AEPabcpp
    - name: AEP transport via ABC system periplasm
    - metabolites: !!omap
      - 2ameph_c: 1.0
      - 2ameph_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08090 or 
        (CLOINNGCF_022845735_04265 and CLOINNGCF_022845735_09065 and 
        CLOINNGCF_022845735_09070)
    - annotation: !!omap
      - biggr: AEPabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: AEPtex
    - name: AEP transport via diffusion extracellular to periplasm
    - metabolites: !!omap
      - 2ameph_e: -1.0
      - 2ameph_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: AEPtex
      - sbo: SBO:0000655
  - !!omap
    - id: AGDC
    - name: N-acetylglucosamine-6-phosphate deacetylase
    - metabolites: !!omap
      - ac_c: 1.0
      - acgam6p_c: -1.0
      - gam6p_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01725 or CLOINNGCF_022845735_07700
        or CLOINNGCF_022845735_18335
    - annotation: !!omap
      - biggr: AGDC
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AGM3PApp
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase 
        (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__LalaDgluMdap_p: 1.0
      - __iPKB_Clostridiaceae__anhgm3p_p: -1.0
      - anhgm_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14405
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AGM3PApp
      - sbo: SBO:0000176
  - !!omap
    - id: AGM4PApp
    - name: N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide 
        amidase (periplasm)
    - metabolites: !!omap
      - LalaDgluMdapDala_p: 1.0
      - anhgm4p_p: -1.0
      - anhgm_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14405
    - annotation: !!omap
      - biggr: AGM4PApp
      - sbo: SBO:0000176
  - !!omap
    - id: AGPOP
    - name: dGTP:Pyruvate 2-O-phosphotransferase
    - metabolites: !!omap
      - dgdp_c: -1.0
      - dgtp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620
    - annotation: !!omap
      - biggr: AGPOP
      - rhea: RHEA:30791
      - sbo: SBO:0000176
  - !!omap
    - id: AGPR
    - name: N-acetyl-g-glutamyl-phosphate reductase
    - metabolites: !!omap
      - acg5p_c: 1.0
      - acg5sa_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13750
    - annotation: !!omap
      - biggr: AGPR
      - rhea: RHEA:21588
      - sbo: SBO:0000176
  - !!omap
    - id: AGTi
    - name: R_Alanine_glyoxylate_aminotransferase__irreversible_
    - metabolites: !!omap
      - ala__L_c: -1.0
      - glx_c: -1.0
      - gly_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09050
    - annotation: !!omap
      - biggr: AGTi
      - rhea: RHEA:24248
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AH6PI
    - name: Arabino-3-hexulose-6-P Isomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ah6p__D_c: -1.0
      - f6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_20165
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AH6PI
      - sbo: SBO:0000176
  - !!omap
    - id: AHCYSNS
    - name: S-adenosylhomocysteine nucleosidase
    - metabolites: !!omap
      - ade_c: 1.0
      - ahcys_c: -1.0
      - h2o_c: -1.0
      - rhcys_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02140 or CLOINNGCF_022845735_11835
        or CLOINNGCF_022845735_22625
    - annotation: !!omap
      - biggr: AHCYSNS
      - rhea: RHEA:17805
      - sbo: SBO:0000176
  - !!omap
    - id: AHCi
    - name: adenosylhomocysteinase
    - metabolites: !!omap
      - adn_c: 1.0
      - ahcys_c: -1.0
      - h2o_c: -1.0
      - hcys__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02140
    - annotation: !!omap
      - biggr: AHCi
      - rhea: RHEA:21708
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AHMMPS_1
    - name: 4 amino 5 hydroxymethyl 2 methylpyrimidine synthetase
    - metabolites: !!omap
      - 4ahmmp_c: 1.0
      - __iPKB_Clostridiaceae__air_c: -1.0
      - gcald_c: 1.0
      - h2o_c: -1.0
      - o2_c: 0.5
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10255
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AHMMPS_1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AHSERL
    - name: O acetylhomoserine  thiol  lyase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__achms_c: -1.0
      - ac_c: 1.0
      - ch4s_c: -1.0
      - h_c: 1.0
      - met__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13910 and 
        CLOINNGCF_022845735_14925
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AHSERL
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AHSERL2
    - name: O acetylhomoserine  thiol  lyase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__achms_c: -1.0
      - ac_c: 1.0
      - h2s_c: -1.0
      - h_c: 1.0
      - hcys__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13910 or CLOINNGCF_022845735_14800
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AHSERL2
      - sbo: SBO:0000176
  - !!omap
    - id: AI2tex
    - name: Ai2 transport, outer membrane
    - metabolites: !!omap
      - mththf_e: -1.0
      - mththf_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: AI2tex
      - sbo: SBO:0000655
  - !!omap
    - id: AI2tpp
    - name: quorum signal AI-2 exporter
    - metabolites: !!omap
      - mththf_c: -1.0
      - mththf_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08955
    - annotation: !!omap
      - biggr: AI2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: AICART
    - name: phosphoribosylaminoimidazolecarboxamide formyltransferase
    - metabolites: !!omap
      - 10fthf_c: -1.0
      - aicar_c: -1.0
      - fprica_c: 1.0
      - thf_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00630
    - annotation: !!omap
      - biggr: AICART
      - rhea: RHEA:22192
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AIRC1
    - name: Phosphoribosylaminoimidazole carboxylase  ATP dependent
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__5aizc_c: 1.0
      - __iPKB_Clostridiaceae__air_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - co2_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00605
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AIRC1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AIRC4
    - name: NCAIR synthetase and NCAIR mutase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__5aizc_c: 1.0
      - __iPKB_Clostridiaceae__air_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2co3_c:-1: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00605
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AIRC4
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AIRCr
    - name: Phosphoribosylaminoimidazole carboxylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__5aizc_c: 1.0
      - __iPKB_Clostridiaceae__air_c: -1.0
      - co2_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00605
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AIRCr
      - sbo: SBO:0000176
  - !!omap
    - id: ALAALAD
    - name: D-alanine-D-alanine dipeptidase
    - metabolites: !!omap
      - ala__D_c: 2.0
      - alaala_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15495
    - annotation: !!omap
      - biggr: ALAALAD
      - rhea: RHEA:20661
      - sbo: SBO:0000176
  - !!omap
    - id: ALAALAabcpp
    - name: D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - alaala_c: 1.0
      - alaala_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06200 or CLOINNGCF_022845735_06205
        or (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: ALAALAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ALAALAr
    - name: D-alanine-D-alanine ligase (reversible)
    - metabolites: !!omap
      - adp_c: 1.0
      - ala__D_c: -2.0
      - alaala_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06815 or CLOINNGCF_022845735_13765
    - annotation: !!omap
      - biggr: ALAALAr
      - rhea: RHEA:11224
      - sbo: SBO:0000176
  - !!omap
    - id: ALAD_L
    - name: L-alanine dehydrogenase
    - metabolites: !!omap
      - ala__L_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - nh4_c:1: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09975
    - annotation: !!omap
      - biggr: ALAD_L
      - rhea: RHEA:18405
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ALAGLNtr
    - name: Dipeptide transport via ABC system ala-gln
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_gln_c: 1.0
      - __iPKB_Clostridiaceae__ala_gln_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ALAGLNtr
      - sbo: SBO:0000655
  - !!omap
    - id: ALAGLUabcpp
    - name: 
        R_L_Alaninylglutamate__LalaLglu__transport_via_ABC_system__periplasm_
    - metabolites: !!omap
      - LalaLglu_c: 1.0
      - LalaLglu_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: ALAGLUabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__ALAGLYtr
    - name: Dipeptide transport via ABC system ala-gly
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__alagly_c: 1.0
      - __iPKB_Clostridiaceae__alagly_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ALAGLYtr
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__ALAHIStr
    - name: Dipeptide transport via ABC system ala-his
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_his_c: 1.0
      - __iPKB_Clostridiaceae__ala_his_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ALAHIStr
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__ALALEUt
    - name: Dipeptide transport via ABC system ala-leu
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_leu_c: 1.0
      - __iPKB_Clostridiaceae__ala_leu_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ALALEUt
      - sbo: SBO:0000655
  - !!omap
    - id: ALAR
    - name: alanine racemase
    - metabolites: !!omap
      - ala__D_c: 1.0
      - ala__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00130 or CLOINNGCF_022845735_15490
        or CLOINNGCF_022845735_21030
    - annotation: !!omap
      - biggr: ALAR
      - rhea: RHEA:20249
      - sbo: SBO:0000176
  - !!omap
    - id: ALATA_D
    - name: D-alanine transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - ala__D_c: -1.0
      - glu__D_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18980 or CLOINNGCF_022845735_19055
    - annotation: !!omap
      - biggr: ALATA_D
      - rhea: RHEA:15869
      - sbo: SBO:0000176
  - !!omap
    - id: ALATA_L
    - name: L-alanine transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - ala__L_c: -1.0
      - glu__L_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02115 or CLOINNGCF_022845735_07050
    - annotation: !!omap
      - biggr: ALATA_L
      - rhea: RHEA:19453
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ALATHRtr
    - name: Dipeptide transport via ABC system ala-thr
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_L_thr__L_c: 1.0
      - __iPKB_Clostridiaceae__ala_L_thr__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ALATHRtr
      - sbo: SBO:0000655
  - !!omap
    - id: ALAabc
    - name: L-alanine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - ala__L_c: 1.0
      - ala__L_e: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_03580 and 
        CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03590 and 
        CLOINNGCF_022845735_03595 and CLOINNGCF_022845735_03600)
    - annotation: !!omap
      - biggr: ALAabc
      - sbo: SBO:0000655
  - !!omap
    - id: ALAt2r
    - name: L-alanine reversible transport via proton symport
    - metabolites: !!omap
      - ala__L_c: 1.0
      - ala__L_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06970 or CLOINNGCF_022845735_21275
    - annotation: !!omap
      - biggr: ALAt2r
      - sbo: SBO:0000655
  - !!omap
    - id: ALAt4
    - name: Alanine-Sodium symporter
    - metabolites: !!omap
      - ala__L_c: 1.0
      - ala__L_e: -1.0
      - na1_c: 1.0
      - na1_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06970 or CLOINNGCF_022845735_21275
    - annotation: !!omap
      - biggr: ALAt4
      - sbo: SBO:0000655
  - !!omap
    - id: ALCD19
    - name: alcohol dehydrogenase (glycerol)
    - metabolites: !!omap
      - glyald_c: -1.0
      - glyc_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02090
    - annotation: !!omap
      - biggr: ALCD19
      - rhea: RHEA:30027
      - sbo: SBO:0000176
  - !!omap
    - id: ALCD19y
    - name: R_alcohol_dehydrogenase__glycerol__NADP_
    - metabolites: !!omap
      - glyald_c: -1.0
      - glyc_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07715 or CLOINNGCF_022845735_24315
    - annotation: !!omap
      - biggr: ALCD19y
      - rhea: RHEA:23592
      - sbo: SBO:0000176
  - !!omap
    - id: ALCD2x
    - name: alcohol dehydrogenase (ethanol)
    - metabolites: !!omap
      - acald_c: -1.0
      - etoh_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02090
    - annotation: !!omap
      - biggr: ALCD2x
      - rhea: RHEA:25290
      - sbo: SBO:0000176
  - !!omap
    - id: ALCD2x:2
    - name: alcohol dehydrogenase (ethanol)
    - metabolites: !!omap
      - acald_c: 1.0
      - etoh_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23495
    - annotation: !!omap
      - biggr: ALCD2x
      - rhea: RHEA:25290
      - sbo: SBO:0000176
  - !!omap
    - id: BTS
    - name: alcohol dehydrogenase (butanol)
    - metabolites: !!omap
      - btal_c: 1.0
      - btoh_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: BTS
      - rhea: RHEA:33199
      - sbo: SBO:0000176
  - !!omap
    - id: ALCD4y
    - name: Butanol synthase (NADPH)
    - metabolites: !!omap
      - btal_c: 1.0
      - btoh_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16900
    - annotation: !!omap
      - biggr: ALCD4y
      - rhea: RHEA:64708
      - sbo: SBO:0000176
  - !!omap
    - id: ALDD2x
    - name: aldehyde dehydrogenase (acetaldehyde, NAD)
    - metabolites: !!omap
      - ac_c: 1.0
      - acald_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: ALDD2x
      - rhea: RHEA:25294
      - sbo: SBO:0000176
  - !!omap
    - id: ALDD2y
    - name: aldehyde dehydrogenase (acetaldehyde, NADP)
    - metabolites: !!omap
      - ac_c: 1.0
      - acald_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03370 or CLOINNGCF_022845735_03735
    - annotation: !!omap
      - biggr: ALDD2y
      - rhea: RHEA:25298
      - sbo: SBO:0000176
  - !!omap
    - id: ALDD3y
    - name: aldehyde dehydrogenase (propanal, NADP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ppal_c: -1.0
      - prpnte_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03370
    - annotation: !!omap
      - biggr: ALDD3y
      - rhea: RHEA:27918
      - sbo: SBO:0000176
  - !!omap
    - id: ALKP
    - name: alkaline phosphatase
    - metabolites: !!omap
      - dha_c: 1.0
      - dhap_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430
    - annotation: !!omap
      - biggr: ALKP
      - rhea: RHEA:51728
      - sbo: SBO:0000176
  - !!omap
    - id: ALLTAHr
    - name: Allantoate amidinohydrolase
    - metabolites: !!omap
      - alltt_c: -1.0
      - h2o_c: -1.0
      - urdglyc_c: 1.0
      - urea_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ALLTAHr
      - rhea: RHEA:11016
      - sbo: SBO:0000176
  - !!omap
    - id: ALLTAMH
    - name: allantoate amidohydrolase
    - metabolites: !!omap
      - alltt_c: -1.0
      - co2_c: 1.0
      - h2o_c: -2.0
      - h_c: -2.0
      - nh4_c:1: 2.0
      - urdglyc_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21515
    - annotation: !!omap
      - biggr: ALLTAMH
      - rhea: RHEA:32279
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ALMPC
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dscl_c: 1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 8.0
      - pc1_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11665
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ALMPC
      - sbo: SBO:0000176
  - !!omap
    - id: AMALT1
    - name: Amylomaltase (maltotriose)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - malt_c: -1.0
      - malttr_c: -1.0
      - maltttr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08565
    - annotation: !!omap
      - biggr: AMALT1
      - sbo: SBO:0000176
  - !!omap
    - id: AMALT2
    - name: Amylomaltase (maltotetraose)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - malt_c: -1.0
      - maltpt_c: 1.0
      - maltttr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08565
    - annotation: !!omap
      - biggr: AMALT2
      - sbo: SBO:0000176
  - !!omap
    - id: AMALT3
    - name: Amylomaltase (maltopentaose)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - malt_c: -1.0
      - malthx_c: 1.0
      - maltpt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08565
    - annotation: !!omap
      - biggr: AMALT3
      - sbo: SBO:0000176
  - !!omap
    - id: AMALT4
    - name: Amylomaltase (maltohexaose)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - malt_c: -1.0
      - malthp_c: 1.0
      - malthx_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08565
    - annotation: !!omap
      - biggr: AMALT4
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMANAPEr
    - name: N-acetylmannosamine 6-phosphate epimerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acmanap_c: -1.0
      - acgam6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05415 or CLOINNGCF_022845735_06100
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMANAPEr
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMANK_1
    - name: N-acetyl-D-mannosamine kinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acmanap_c: 1.0
      - acmana_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21800
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMANK_1
      - sbo: SBO:0000176
  - !!omap
    - id: AMMQT8_2
    - name: S-adenosylmethione:2-demethylmenaquinone methyltransferase
    - metabolites: !!omap
      - 2dmmq8_c: -1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
      - mqn8_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07635
    - annotation: !!omap
      - biggr: AMMQT8_2
      - sbo: SBO:0000176
  - !!omap
    - id: TMN
    - name: R_thiaminase
    - metabolites: !!omap
      - 4ahmmp_c: 1.0
      - 4mhetz_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - thm_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: TMN
      - rhea: RHEA:17509
      - sbo: SBO:0000176
  - !!omap
    - id: AMPDA
    - name: R_Adenosine_monophosphate_deaminase
    - metabolites: !!omap
      - amp_c: -1.0
      - h2o_c: -1.0
      - imp_c: 1.0
      - nh4_c:0: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21980
    - annotation: !!omap
      - biggr: AMPDA:2
      - rhea: RHEA:14777
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP1
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_asn__L_c: -1.0
      - asn__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP10
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_asp__L_c: -1.0
      - asp__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP10
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP11
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_pro__L_c: -1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pro__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP11
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP12
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_gln_c: -1.0
      - ala__L_c: 1.0
      - gln__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP12
      - sbo: SBO:0000176
  - !!omap
    - id: AMPEP13
    - name: Aminopeptidase
    - metabolites: !!omap
      - ala_L_asp__L_c: -1.0
      - ala__L_c: 1.0
      - asp__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: AMPEP13
      - rhea: RHEA:37267
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP14
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__met_L_ala__L_c: -1.0
      - ala__L_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - met__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP14
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP15
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__prohisglu_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - his__L_c: 1.0
      - pro__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP15
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP16
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__lysglugly_c: -1.0
      - glu__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - lys__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP16
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP17
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glyglygln_c: -1.0
      - gln__L_c: 1.0
      - gly_c: 2.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP17
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP18
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__serglugly_c: -1.0
      - glu__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - ser__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP18
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP2
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_L_thr__L_c: -1.0
      - ala__L_c: 1.0
      - h2o_c: -1.0
      - thr__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP3
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_gln_c: -1.0
      - gln__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP4
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__alagly_c: -1.0
      - ala__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP4
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP5
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_L_glu__L_c: -1.0
      - ala__L_c: 1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP5
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP6
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_leu_c: -1.0
      - ala__L_c: 1.0
      - h2o_c: -1.0
      - leu__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP6
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP7
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_his_c: -1.0
      - ala__L_c: 1.0
      - h2o_c: -1.0
      - his__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP7
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP8
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_glu__L_c: -1.0
      - glu__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP8
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__AMPEP9
    - name: Aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_met_c: -1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - met__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__AMPEP9
      - sbo: SBO:0000176
  - !!omap
    - id: AMPTASECG
    - name: alanyl aminopeptidase (cys-gly)
    - metabolites: !!omap
      - cgly_c: -1.0
      - cys__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11975 or CLOINNGCF_022845735_15380
        or CLOINNGCF_022845735_15510 or (CLOINNGCF_022845735_04095 and 
        CLOINNGCF_022845735_23470)
    - annotation: !!omap
      - biggr: AMPTASECG
      - rhea: RHEA:28783
      - sbo: SBO:0000176
  - !!omap
    - id: AMPTASEPG
    - name: aminopeptidase (pro-gly)
    - metabolites: !!omap
      - gly_c: 1.0
      - h2o_c: -1.0
      - pro__L_c: 1.0
      - progly_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15510
    - annotation: !!omap
      - biggr: AMPTASEPG
      - rhea: RHEA:28799
      - sbo: SBO:0000176
  - !!omap
    - id: ANHGMtex
    - name: GlcNAc-anhMurNAc transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - anhgm_e: -1.0
      - anhgm_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ANHGMtex
      - sbo: SBO:0000655
  - !!omap
    - id: ANPRT
    - name: anthranilate phosphoribosyltransferase
    - metabolites: !!omap
      - anth_c: -1.0
      - ppi_c: 1.0
      - pran_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21160 or CLOINNGCF_022845735_21165
    - annotation: !!omap
      - biggr: ANPRT
      - rhea: RHEA:11768
      - sbo: SBO:0000176
  - !!omap
    - id: ANS
    - name: anthranilate synthase
    - metabolites: !!omap
      - anth_c: 1.0
      - chor_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21160 or 
        (CLOINNGCF_022845735_21155 and CLOINNGCF_022845735_21160)
    - annotation: !!omap
      - biggr: ANS
      - rhea: RHEA:21732
      - sbo: SBO:0000176
  - !!omap
    - id: ANS2
    - name: Anthranilate synthase
    - metabolites: !!omap
      - anth_c: 1.0
      - chor_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - nh4_c:1: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21155 and 
        CLOINNGCF_022845735_21160
    - annotation: !!omap
      - biggr: ANS2
      - sbo: SBO:0000176
  - !!omap
    - id: ANS2:2
    - name: Anthranilate synthase
    - metabolites: !!omap
      - anth_c: 1.0
      - chor_c: -1.0
      - h2o_c: 1.0
      - nh4_c:0: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21160
    - annotation: !!omap
      - biggr: ANS2:2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ANTDR
    - name: ''
    - metabolites: !!omap
      - atp_c: -1.0
      - datp_c: 1.0
      - fmn_c: 1.0
      - fmnh2_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00170
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ANTDR
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__APDH
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2amac_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__APDH
      - sbo: SBO:0000176
  - !!omap
    - id: PTPATi
    - name: pantetheine-phosphate adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - dpcoa_c: 1.0
      - h_c: -1.0
      - pan4p_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11560
    - annotation: !!omap
      - biggr: PTPATi
      - rhea: RHEA:19801
      - sbo: SBO:0000176
  - !!omap
    - id: APRAUR
    - name: 5-amino-6-(5-phosphoribosylamino)uracil reductase
    - metabolites: !!omap
      - 5aprbu_c: 1.0
      - 5apru_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05210 or CLOINNGCF_022845735_09220
    - annotation: !!omap
      - biggr: APRAUR
      - rhea: RHEA:17845
      - sbo: SBO:0000176
  - !!omap
    - id: ARAB_Lt
    - name: R_L_arabinoase_extracellular_transport
    - metabolites: !!omap
      - arab__L_c: 1.0
      - arab__L_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ARAB_Lt
      - sbo: SBO:0000655
  - !!omap
    - id: ARBTpts
    - name: R_arbutin_transport_via_PEPPyr_PTS
    - metabolites: !!omap
      - arbt6p_c: 1.0
      - arbt_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22865 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_04190 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: ARBTpts
      - sbo: SBO:0000655
  - !!omap
    - id: ARBabc
    - name: L-arabinose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - arab__L_c: 1.0
      - arab__L_e: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18305 and 
        CLOINNGCF_022845735_18310
    - annotation: !!omap
      - biggr: ARBabc
      - sbo: SBO:0000655
  - !!omap
    - id: ARBt2r
    - name: L-arabinose transport via proton symport
    - metabolites: !!omap
      - arab__L_c: 1.0
      - arab__L_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: ARBt2r
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__ARGSL
    - name: Argininosuccinate lyase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__argsuc_c: -1.0
      - arg__L_c: 1.0
      - fum_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13755
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ARGSL
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ARGSS
    - name: Argininosuccinate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__argsuc_c: 1.0
      - amp_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - citr__L_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13760
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ARGSS
      - sbo: SBO:0000176
  - !!omap
    - id: ARGabc
    - name: L-arginine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - arg__L_c: 1.0
      - arg__L_e: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_14700 and 
        CLOINNGCF_022845735_14705 and CLOINNGCF_022845735_14710)
    - annotation: !!omap
      - biggr: ARGabc
      - sbo: SBO:0000655
  - !!omap
    - id: CHDLDH
    - name: ''
    - metabolites: !!omap
      - Largn_c: -1.0
      - co2_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - tyr__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00560
    - annotation: !!omap
      - biggr: CHDLDH:2
      - rhea: RHEA:12256
      - sbo: SBO:0000176
  - !!omap
    - id: AROH
    - name: R_L_Arogenate_hydro_lyase
    - metabolites: !!omap
      - Largn_c: -1.0
      - co2_c: 1.0
      - h2o_c: 1.0
      - phe__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00585
    - annotation: !!omap
      - biggr: AROH:2
      - rhea: RHEA:12536
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ARSR
    - name: ''
    - metabolites: !!omap
      - actn__R_c: -1.0
      - actn__S_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ARSR
      - rhea: RHEA:12092
      - sbo: SBO:0000176
  - !!omap
    - id: ASAD
    - name: aspartate-semialdehyde dehydrogenase
    - metabolites: !!omap
      - 4pasp_c: 1.0
      - aspsa_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19780
    - annotation: !!omap
      - biggr: ASAD
      - rhea: RHEA:24284
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ASCBPL
    - name: L-ascorbate 6-phosphate lactonase
    - metabolites: !!omap
      - 3dhgulnp_c: 1.0
      - __iPKB_Clostridiaceae__ascb6p_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02930
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ASCBPL
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ASCBpts
    - name: L-ascorbate transport via PEP:Pyr PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ascb6p_c: 1.0
      - ascb__L_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01790 and 
        CLOINNGCF_022845735_01795 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ASCBpts
      - sbo: SBO:0000655
  - !!omap
    - id: ASNN
    - name: L-asparaginase
    - metabolites: !!omap
      - asn__L_c: -1.0
      - asp__L_c: 1.0
      - h2o_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08475 or CLOINNGCF_022845735_12535
    - annotation: !!omap
      - biggr: ASNN
      - rhea: RHEA:21016
      - sbo: SBO:0000176
  - !!omap
    - id: ASNS1
    - name: asparagine synthase (glutamine-hydrolysing)
    - metabolites: !!omap
      - amp_c: 1.0
      - asn__L_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06040 or CLOINNGCF_022845735_11745
        or CLOINNGCF_022845735_12535
    - annotation: !!omap
      - biggr: ASNS1
      - rhea: RHEA:12228
      - sbo: SBO:0000176
  - !!omap
    - id: ASNS2
    - name: asparagine synthetase
    - metabolites: !!omap
      - amp_c: 1.0
      - asn__L_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - nh4_c:1: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10320
    - annotation: !!omap
      - biggr: ASNS2
      - rhea: RHEA:11372
      - sbo: SBO:0000176
  - !!omap
    - id: ASNabc
    - name: L-asparagine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - asn__L_c: 1.0
      - asn__L_e: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: ASNabc
      - sbo: SBO:0000655
  - !!omap
    - id: ASO3t4pp
    - name: arsenite transporter via sodium antiport (periplasm)
    - metabolites: !!omap
      - aso3_c: -1.0
      - aso3_p: 1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17410
    - annotation: !!omap
      - biggr: ASO3t4pp:3
      - sbo: SBO:0000655
  - !!omap
    - id: ASO3tex
    - name: arsenite transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - aso3_e: -1.0
      - aso3_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ASO3tex:3
      - sbo: SBO:0000655
  - !!omap
    - id: ASO4rt2rpp
    - name: arsenate reversible transport via symport (periplasm)
    - metabolites: !!omap
      - arsna_c: 1.0
      - arsna_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ASO4rt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: ASO4t4pp
    - name: arsenate transporter via sodium antiport (periplasm)
    - metabolites: !!omap
      - arsna_c: -1.0
      - arsna_p: 1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17410
    - annotation: !!omap
      - biggr: ASO4t4pp
      - sbo: SBO:0000655
  - !!omap
    - id: ASO4tex
    - name: Arsenate transporter (extracellular to periplasm)
    - metabolites: !!omap
      - arsna_e: -1.0
      - arsna_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ASO4tex
      - sbo: SBO:0000655
  - !!omap
    - id: ASPCT_1
    - name: aspartate carbamoyltransferase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - cbasp_c: 1.0
      - cbp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13765 or CLOINNGCF_022845735_14605
    - annotation: !!omap
      - biggr: ASPCT_1
      - rhea: RHEA:20013
      - sbo: SBO:0000176
  - !!omap
    - id: ASPDTDe
    - name: D-aspartate transport, extracellular
    - metabolites: !!omap
      - asp__D_c: -1.0
      - asp__D_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ASPDTDe
      - sbo: SBO:0000655
  - !!omap
    - id: ASPK
    - name: aspartate kinase
    - metabolites: !!omap
      - 4pasp_c: 1.0
      - adp_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02195 or CLOINNGCF_022845735_06105
        or CLOINNGCF_022845735_07610 or CLOINNGCF_022845735_19775
    - annotation: !!omap
      - biggr: ASPK
      - rhea: RHEA:23776
      - sbo: SBO:0000176
  - !!omap
    - id: ASPO2
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - h_c: 2.0
      - iasp_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01105
    - annotation: !!omap
      - biggr: ASPO2:2
      - rhea: RHEA:42440
      - sbo: SBO:0000176
  - !!omap
    - id: ASPO2y
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - h_c: 2.0
      - iasp_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01105
    - annotation: !!omap
      - biggr: ASPO2y:2
      - rhea: RHEA:42444
      - sbo: SBO:0000176
  - !!omap
    - id: ASPO5
    - name: L-aspartate oxidase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - fum_c: -1.0
      - h_c: 1.0
      - iasp_c: 1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01105
    - annotation: !!omap
      - biggr: ASPO5:2
      - rhea: RHEA:30043
      - sbo: SBO:0000176
  - !!omap
    - id: ASPR
    - name: aspartase racemase
    - metabolites: !!omap
      - asp__D_c: -1.0
      - asp__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04255
    - annotation: !!omap
      - biggr: ASPR
      - rhea: RHEA:14973
      - sbo: SBO:0000176
  - !!omap
    - id: ASPT
    - name: L-aspartase
    - metabolites: !!omap
      - asp__L_c: -1.0
      - fum_c: 1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11685
    - annotation: !!omap
      - biggr: ASPT
      - rhea: RHEA:16601
      - sbo: SBO:0000176
  - !!omap
    - id: ASPTA
    - name: aspartate transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - asp__L_c: -1.0
      - glu__L_c: 1.0
      - oaa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00590 or CLOINNGCF_022845735_11340
    - annotation: !!omap
      - biggr: ASPTA
      - rhea: RHEA:21824
      - sbo: SBO:0000176
  - !!omap
    - id: ASPTA6
    - name: E L-alanine-alpha-keto acid aminotransferase
    - metabolites: !!omap
      - ala__L_c: -1.0
      - asp__L_c: 1.0
      - oaa_c: -1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09050
    - annotation: !!omap
      - biggr: ASPTA6
      - rhea: RHEA:77347
      - sbo: SBO:0000176
  - !!omap
    - id: ASPabc
    - name: L-aspartate transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - asp__L_c: 1.0
      - asp__L_e: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_14705 and 
        CLOINNGCF_022845735_15445)
    - annotation: !!omap
      - biggr: ASPabc
      - sbo: SBO:0000655
  - !!omap
    - id: ASPabcpp
    - name: L-aspartate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21245
    - annotation: !!omap
      - biggr: ASPabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__ASR2
    - name: Arsenate reductase (thioredoxin)
    - metabolites: !!omap
      - arsna_c: -1.0
      - aso3_c: 1.0
      - h2o_c: 1.0
      - h_c: -2.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17405
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ASR2
      - sbo: SBO:0000176
  - !!omap
    - id: ATPHs
    - name: ATP amine hydrolysis (spontaneous)
    - metabolites: !!omap
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - itp_c: 1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: ATPHs
      - rhea: RHEA:13037
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ATPPRT
    - name: ATP phosphoribosyltransferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__prbatp_c: 1.0
      - atp_c: -1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06885
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ATPPRT
      - sbo: SBO:0000176
  - !!omap
    - id: ATPS4rpp
    - name: ATP synthase (four protons for one ATP) (periplasm)
    - metabolites: !!omap
      - adp_c: -1.0
      - atp_c: 1.0
      - h2o_c: 1.0
      - h_c: 3.0
      - h_p: -4.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01580 or 
        (CLOINNGCF_022845735_01575 and CLOINNGCF_022845735_01580)
    - annotation: !!omap
      - biggr: ATPS4rpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALAALAabcpp
    - name: Beta alanyl L alanine transport via ABC system  periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaala_c: 1.0
      - __iPKB_Clostridiaceae__balaala_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALAALAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALAALAtex
    - name: Beta alanyl L alanine transport via diffusion  extracellular to 
        periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaala_e: -1.0
      - __iPKB_Clostridiaceae__balaala_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALAALAtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALABALAabcpp
    - name: Beta alanyl beta alanine transport via ABC system  periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balabala_c: 1.0
      - __iPKB_Clostridiaceae__balabala_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALABALAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALABALAtex
    - name: Beta alanyl beta alanine transport via diffusion  extracellular to 
        periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balabala_e: -1.0
      - __iPKB_Clostridiaceae__balabala_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALABALAtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALAGLYabcpp
    - name: Beta alanyl L glycine transport via ABC system  periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balagly_c: 1.0
      - __iPKB_Clostridiaceae__balagly_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALAGLYabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALAGLYtex
    - name: Beta alanyl L glycine transport via diffusion  extracellular to 
        periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balagly_e: -1.0
      - __iPKB_Clostridiaceae__balagly_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALAGLYtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALALEUabcpp
    - name: Beta alanyl L leucine transport via ABC system  periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaleu_c: 1.0
      - __iPKB_Clostridiaceae__balaleu_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALALEUabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALALEUtex
    - name: L Histidinylglycine transport via diffusion  extracellular to 
        periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaleu_e: -1.0
      - __iPKB_Clostridiaceae__balaleu_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALALEUtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BALAMDAH
    - name: Beta Alaninamide amidohydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balamd_c: -1.0
      - ala_B_c: 1.0
      - h2o_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22935
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BALAMDAH
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__BCOALIG
    - name: Benzoate CoA ligase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__benzcoa_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - bz_c: -1.0
      - coa_c: -1.0
      - h_c: -4.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BCOALIG
      - sbo: SBO:0000176
  - !!omap
    - id: BGLA
    - name: Beta-glucosidase
    - metabolites: !!omap
      - cellb_c: -1.0
      - glc__D_c: 2.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02340
    - annotation: !!omap
      - biggr: BGLA
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__BGLA1
    - name: 6-phospho-beta-glucosidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__6pgg_c: -1.0
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02350 or CLOINNGCF_022845735_09615
        or CLOINNGCF_022845735_10950 or CLOINNGCF_022845735_19895
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BGLA1
      - sbo: SBO:0000176
  - !!omap
    - id: BGLApp
    - name: R_beta_glucosidase__periplasmic__
    - metabolites: !!omap
      - cellb_p: -1.0
      - glc__D_p: 2.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: BGLApp
      - sbo: SBO:0000176
  - !!omap
    - id: BGLK
    - name: Beta-glucoside kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cellb_c: -1.0
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23130
    - annotation: !!omap
      - biggr: BGLK
      - sbo: SBO:0000176
  - !!omap
    - id: BG_CELLB
    - name: R_beta_glucosidase__cellobiose_
    - metabolites: !!omap
      - cellb_e: -1.0
      - glc__D_e: 2.0
      - h2o_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01145 or CLOINNGCF_022845735_03680
    - annotation: !!omap
      - biggr: BG_CELLB
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__BG_MADG
    - name: Beta glucosidase  methyl alpha D glucoside
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__madg_e: -1.0
      - glc__D_e: 1.0
      - h2o_e: -1.0
      - meoh_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BG_MADG
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__BG_MBDG
    - name: Beta glucosidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__mbdg_e: -1.0
      - glc__D_e: 1.0
      - h2o_e: -1.0
      - meoh_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BG_MBDG
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__BLAMDabcpp
    - name: Beta alanyl L alanine transport via ABC system  periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balamd_c: 1.0
      - __iPKB_Clostridiaceae__balamd_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BLAMDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BLAMDtex
    - name: Beta Alaninamide transport via diffusion  extracellular to periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balamd_e: -1.0
      - __iPKB_Clostridiaceae__balamd_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BLAMDtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__BSCT
    - name: Benzoylsuccinyl-CoA thiolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__benzcoa_c: 1.0
      - __iPKB_Clostridiaceae__sbzcoa_c: -1.0
      - coa_c: -1.0
      - h_c: -4.0
      - succoa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__BSCT
      - sbo: SBO:0000176
  - !!omap
    - id: BTDD_RR
    - name: R__R_R__butanediol_dehydrogenase
    - metabolites: !!omap
      - actn__R_c: 1.0
      - btd_RR_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24735 or CLOINNGCF_022845735_24955
    - annotation: !!omap
      - biggr: BTDD_RR
      - rhea: RHEA:24340
      - sbo: SBO:0000176
  - !!omap
    - id: BTNTe
    - name: Release of biotin across the basolatral membrane
    - metabolites: !!omap
      - btn_c: -1.0
      - btn_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: BTNTe
      - sbo: SBO:0000655
  - !!omap
    - id: BTNt
    - name: Biotin ABC transporter
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - btn_c: 1.0
      - btn_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04215 and 
        CLOINNGCF_022845735_04220 and CLOINNGCF_022845735_04225 and 
        CLOINNGCF_022845735_21090
    - annotation: !!omap
      - biggr: BTNt
      - sbo: SBO:0000655
  - !!omap
    - id: BTNt2i
    - name: Biotin uptake
    - metabolites: !!omap
      - btn_c: 1.0
      - btn_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06080
    - annotation: !!omap
      - biggr: BTNt2i
      - sbo: SBO:0000655
  - !!omap
    - id: BZt
    - name: benzoate transport (diffusion)
    - metabolites: !!omap
      - bz_c: 1.0
      - bz_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: BZt
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__C4HP
    - name: ''
    - metabolites: !!omap
      - 34hpp_c: -1.0
      - 4hoxpacd_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__C4HP
      - rhea: RHEA:18697
      - sbo: SBO:0000176
  - !!omap
    - id: CA2abc
    - name: Calcium transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ca2_c: 1.0
      - ca2_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08045 or CLOINNGCF_022845735_09570
    - annotation: !!omap
      - biggr: CA2abc
      - sbo: SBO:0000655
  - !!omap
    - id: CA2abc1
    - name: calcium transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ca2_c: -1.0
      - ca2_e: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09570
    - annotation: !!omap
      - biggr: CA2abc1
      - sbo: SBO:0000655
  - !!omap
    - id: CA2abcpp
    - name: calcium transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ca2_c: 1.0
      - ca2_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09570
    - annotation: !!omap
      - biggr: CA2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CARNabcpp
    - name: R_Carnosine_transport_via_ABC_system__periplasm_
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - carn_c: 1.0
      - carn_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or 
        (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: CARNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CARNtex
    - name: R_L_Carnosine_transport_via_diffusion__extracellular_to_periplasm_
    - metabolites: !!omap
      - carn_e: -1.0
      - carn_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: CARNtex
      - sbo: SBO:0000655
  - !!omap
    - id: CAT
    - name: catalase
    - metabolites: !!omap
      - h2o2_c: -2.0
      - h2o_c: 2.0
      - o2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14935
    - annotation: !!omap
      - biggr: CAT
      - rhea: RHEA:20309
      - sbo: SBO:0000176
  - !!omap
    - id: CAt6pp
    - name: calcium / sodium antiporter (1:1)
    - metabolites: !!omap
      - ca2_c: -1.0
      - ca2_p: 1.0
      - na1_c: 1.0
      - na1_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15820
    - annotation: !!omap
      - biggr: CAt6pp
      - sbo: SBO:0000655
  - !!omap
    - id: CBPS
    - name: carbamoyl-phosphate synthase (glutamine-hydrolysing)
    - metabolites: !!omap
      - adp_c: 2.0
      - atp_c: -2.0
      - cbp_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2co3_c:-1: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13765 or 
        (CLOINNGCF_022845735_14560 and CLOINNGCF_022845735_14565)
    - annotation: !!omap
      - biggr: CBPS
      - rhea: RHEA:18633
      - sbo: SBO:0000176
  - !!omap
    - id: CBPS:2
    - name: carbamoyl-phosphate synthase (glutamine-hydrolysing)
    - metabolites: !!omap
      - adp_c: 2.0
      - atp_c: -2.0
      - cbp_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2co3_c:-1: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14560 and 
        CLOINNGCF_022845735_14565
    - annotation: !!omap
      - biggr: CBPS
      - rhea: RHEA:18633
      - sbo: SBO:0000176
  - !!omap
    - id: CD2abc1
    - name: Cadmium transport out via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cd2_c: -1.0
      - cd2_e: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06990
    - annotation: !!omap
      - biggr: CD2abc1
      - sbo: SBO:0000655
  - !!omap
    - id: CD2tex
    - name: cadmium (Cd+2) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - cd2_e: -1.0
      - cd2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: CD2tex
      - sbo: SBO:0000655
  - !!omap
    - id: CD2tpp
    - name: cadmium (+2) transport in via permease (no H+)
    - metabolites: !!omap
      - cd2_c: 1.0
      - cd2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08540
    - annotation: !!omap
      - biggr: CD2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CD6P
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: 1.0
      - cdp_c: 1.0
      - ctp_c: -1.0
      - f6p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CD6P
      - sbo: SBO:0000176
  - !!omap
    - id: CDDTPP
    - name: DTTP:cytidine 5'-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dtdp_c: 1.0
      - dttp_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: CDDTPP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CDGUNPD
    - name: 3,5-cyclic-nucleotide phosphodiesterase
    - metabolites: !!omap
      - 5pg35pg_c: 1.0
      - __iPKB_Clostridiaceae__cdigmp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04290 or CLOINNGCF_022845735_04520
        or CLOINNGCF_022845735_05765 or CLOINNGCF_022845735_07030 or 
        CLOINNGCF_022845735_07590 or CLOINNGCF_022845735_09185 or 
        CLOINNGCF_022845735_09995 or CLOINNGCF_022845735_10150 or 
        CLOINNGCF_022845735_10225 or CLOINNGCF_022845735_16590 or 
        CLOINNGCF_022845735_16595
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CDGUNPD
      - sbo: SBO:0000176
  - !!omap
    - id: CDPMEK
    - name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
    - metabolites: !!omap
      - 2p4c2me_c: 1.0
      - 4c2me_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00840
    - annotation: !!omap
      - biggr: CDPMEK
      - rhea: RHEA:18437
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CELASEpp
    - name: Endo 1 4 D glucanase cellolose
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cell4_p: -1.0
      - cellb_p: 2.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CELASEpp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CELBpts
    - name: Cellobiose transport via PEPPyr PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__6pgg_c: 1.0
      - cellb_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19035 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_19500 and CLOINNGCF_022845735_19510) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_19095 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_01045 and 
        CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21305 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_19095 and CLOINNGCF_022845735_19100 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_19095 and CLOINNGCF_022845735_19500 and 
        CLOINNGCF_022845735_21945 and CLOINNGCF_022845735_24790)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CELBpts
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CELBt2
    - name: ''
    - metabolites: !!omap
      - cellb_c: 1.0
      - cellb_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CELBt2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CELLBpts_2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cellb6p_c: 1.0
      - cellb_e: -1.0
      - h_c: -2.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01040 or CLOINNGCF_022845735_02335
        or (CLOINNGCF_022845735_02230 and CLOINNGCF_022845735_02270 and 
        CLOINNGCF_022845735_23585) or (CLOINNGCF_022845735_02335 and 
        CLOINNGCF_022845735_21295 and CLOINNGCF_022845735_25015) or 
        (CLOINNGCF_022845735_19505 and CLOINNGCF_022845735_19510 and 
        CLOINNGCF_022845735_23585)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CELLBpts_2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CELLS
    - name: Cellulose synthase  UDP forming
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cell4_p: 1.0
      - h2o_c: -1.0
      - h_c: 4.0
      - udp_c: 4.0
      - udpg_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CELLS
      - sbo: SBO:0000655
  - !!omap
    - id: CHLabc
    - name: choline transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - chol_c: 1.0
      - chol_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07625 or CLOINNGCF_022845735_10760
        or CLOINNGCF_022845735_24265 or (CLOINNGCF_022845735_13670 and 
        CLOINNGCF_022845735_13675 and CLOINNGCF_022845735_24265)
    - annotation: !!omap
      - biggr: CHLabc
      - sbo: SBO:0000655
  - !!omap
    - id: CHLabc_rev
    - name: T00114b
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - chol_c: -1.0
      - chol_e: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: CHLabc_rev
      - sbo: SBO:0000655
  - !!omap
    - id: CHOLSH
    - name: R_choline_sulphatase
    - metabolites: !!omap
      - chol_c: 1.0
      - chols_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - so4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18730
    - annotation: !!omap
      - biggr: CHOLSH
      - rhea: RHEA:20820
      - sbo: SBO:0000176
  - !!omap
    - id: CHOLSabc_1
    - name: R_choline_sulfate_transport_in_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - chols_c: 1.0
      - chols_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10760 or CLOINNGCF_022845735_24265
    - annotation: !!omap
      - biggr: CHOLSabc_1
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CHORM
    - name: Chorismate mutase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pphn_c: 1.0
      - chor_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00585 or CLOINNGCF_022845735_12480
        or CLOINNGCF_022845735_19755
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CHORM
      - sbo: SBO:0000176
  - !!omap
    - id: CHORS
    - name: chorismate synthase
    - metabolites: !!omap
      - 3psme_c: -1.0
      - chor_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00575
    - annotation: !!omap
      - biggr: CHORS
      - rhea: RHEA:21020
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CLPNH160pp
    - name: Cardiolipin hydrolase (periplasm, n-C16:0)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pg160_p: 1.0
      - clpn160_p: -1.0
      - h2o_p: -1.0
      - h_p: 1.0
      - pa160_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CLPNH160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CLPNS160
    - name: Cardiolipin synthase (n-C16:0)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pg160_c: -2.0
      - clpn160_c: 1.0
      - glyc_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19455
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CLPNS160
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CLPNS160pp
    - name: Cardiolipin synthase (periplasmic, n-C16:0)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pg160_p: -2.0
      - clpn160_p: 1.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CLPNS160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CLS
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pg160_c: -1.0
      - cdpdhdecg_c: -1.0
      - clpn160_c: 1.0
      - cmp_c: 1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CLS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CMCBTFL
    - name: CMCBTFL
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cmcbtt_c: -1.0
      - __iPKB_Clostridiaceae__fcmcbtt_c: 1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04725
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CMCBTFL
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CMCBTFU
    - name: CMCBTFU
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cmcbtt_c: 1.0
      - __iPKB_Clostridiaceae__fcmcbtt_c: -1.0
      - fe3_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04725
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CMCBTFU
      - sbo: SBO:0000176
  - !!omap
    - id: CMPDAi
    - name: CMP deaminase
    - metabolites: !!omap
      - cmp_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06715
    - annotation: !!omap
      - biggr: CMPDAi
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CO2FO
    - name: ''
    - metabolites: !!omap
      - co2_c: -1.0
      - co_c: 1.0
      - fdxox_c: 1.0
      - fdxrd_c: -1.0
      - h2o_c: 1.0
      - h_c: -2.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_17610
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CO2FO
      - sbo: SBO:0000176
  - !!omap
    - id: CO2t
    - name: CO2 transporter via diffusion
    - metabolites: !!omap
      - co2_c: 1.0
      - co2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: CO2t
      - sbo: SBO:0000655
  - !!omap
    - id: CO2tex
    - name: CO2 transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - co2_e: -1.0
      - co2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: CO2tex
      - sbo: SBO:0000655
  - !!omap
    - id: CO2tpp
    - name: CO2 transporter via diffusion (periplasm)
    - metabolites: !!omap
      - co2_c: 1.0
      - co2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: CO2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: COBALT2abcpp
    - name: Cobalt (Co+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cobalt2_c: -1.0
      - cobalt2_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00815
    - annotation: !!omap
      - biggr: COBALT2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: COBALT2tpp
    - name: cobalt transport in via permease (no H+)
    - metabolites: !!omap
      - cobalt2_c: 1.0
      - cobalt2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08540
    - annotation: !!omap
      - biggr: COBALT2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: COBALTt5
    - name: cobalttransportin/outviapermease(noH+)
    - metabolites: !!omap
      - cobalt2_c: -1.0
      - cobalt2_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06955 or CLOINNGCF_022845735_10070
        or CLOINNGCF_022845735_15205
    - annotation: !!omap
      - biggr: COBALTt5
      - sbo: SBO:0000655
  - !!omap
    - id: COabc
    - name: Cobalt transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cobalt2_c: 1.0
      - cobalt2_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_06200 and 
        CLOINNGCF_022845735_19180) or (CLOINNGCF_022845735_17720 and 
        CLOINNGCF_022845735_20525) or (CLOINNGCF_022845735_04215 and 
        CLOINNGCF_022845735_04220 and CLOINNGCF_022845735_04225)
    - annotation: !!omap
      - biggr: COabc
      - sbo: SBO:0000655
  - !!omap
    - id: COt_1
    - name: co transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - co_e: -1.0
      - co_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: COt_1:2
      - sbo: SBO:0000655
  - !!omap
    - id: CPPPGO
    - name: coproporphyrinogen oxidase (O2 required)
    - metabolites: !!omap
      - co2_c: 2.0
      - cpppg3_c: -1.0
      - h2o_c: 2.0
      - h_c: -2.0
      - o2_c: -1.0
      - pppg9_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12260
    - annotation: !!omap
      - biggr: CPPPGO
      - rhea: RHEA:18257
      - sbo: SBO:0000176
  - !!omap
    - id: CPPPGO2
    - name: Oxygen Independent coproporphyrinogen-III oxidase
    - metabolites: !!omap
      - amet_c: -2.0
      - co2_c: 2.0
      - cpppg3_c: -1.0
      - dad_5_c: 2.0
      - met__L_c: 2.0
      - pppg9_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12260
    - annotation: !!omap
      - biggr: CPPPGO2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CRO4abcpp
    - name: Chromate transport via ABC system (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cro4_c: 1.0
      - __iPKB_Clostridiaceae__cro4_p: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04260 or CLOINNGCF_022845735_23885
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CRO4abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__CRO4t3pp
    - name: Chromate transport out via proton antiport (cytoplasm to periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cro4_c: -1.0
      - __iPKB_Clostridiaceae__cro4_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15045
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CRO4t3pp
      - sbo: SBO:0000655
  - !!omap
    - id: CS
    - name: citrate synthase
    - metabolites: !!omap
      - accoa_c: -1.0
      - cit_c: 1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - oaa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16520 or CLOINNGCF_022845735_24120
    - annotation: !!omap
      - biggr: CS
      - rhea: RHEA:16845
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__CT6PT
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: -1.0
      - __iPKB_Clostridiaceae__tagdp__D_c: 1.0
      - cdp_c: 1.0
      - ctp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__CT6PT
      - sbo: SBO:0000176
  - !!omap
    - id: CTPS1_2
    - name: CTP synthase (NH3)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ctp_c: 1.0
      - h_c: 2.0
      - nh4_c:1: -1.0
      - pi_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12740
    - annotation: !!omap
      - biggr: CTPS1_2
      - rhea: RHEA:16597
      - sbo: SBO:0000176
  - !!omap
    - id: CTPS1_2:2
    - name: CTP synthase (NH3)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ctp_c: 1.0
      - h_c: 1.0
      - nh4_c:0: -1.0
      - pi_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12740
    - annotation: !!omap
      - biggr: CTPS1_2:2
      - rhea: RHEA:16597
      - sbo: SBO:0000176
  - !!omap
    - id: CTPS2
    - name: CTP synthase (glutamine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - ctp_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12740
    - annotation: !!omap
      - biggr: CTPS2
      - rhea: RHEA:26426
      - sbo: SBO:0000176
  - !!omap
    - id: CU2abcpp
    - name: Copper (Cu+2) ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cu2_c: -1.0
      - cu2_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14785
    - annotation: !!omap
      - biggr: CU2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CU2tpp
    - name: copper transport in via permease (no H+)
    - metabolites: !!omap
      - cu2_c: 1.0
      - cu2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08540
    - annotation: !!omap
      - biggr: CU2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: CUabcpp
    - name: Copper transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cu2_c: 1.0
      - cu2_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19180
    - annotation: !!omap
      - biggr: CUabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYSDS
    - name: Cysteine Desulfhydrase
    - metabolites: !!omap
      - cys__L_c: -1.0
      - h2o_c: -1.0
      - h2s_c: 1.0
      - nh4_c:1: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02585 or CLOINNGCF_022845735_15375
        or CLOINNGCF_022845735_15825 or CLOINNGCF_022845735_24815
    - annotation: !!omap
      - biggr: CYSDS:2
      - rhea: RHEA:24931
      - sbo: SBO:0000176
  - !!omap
    - id: CYSDSF
    - name: cysteine desulfurase
    - metabolites: !!omap
      - ala__L_c: 1.0
      - cys__L_c: -1.0
      - s_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11975
    - annotation: !!omap
      - biggr: CYSDSF
      - sbo: SBO:0000176
  - !!omap
    - id: CYSS_2
    - name: cysteine synthase
    - metabolites: !!omap
      - ac_c: 1.0
      - acser_c: -1.0
      - cys__L_c: 1.0
      - h2s_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14800 or CLOINNGCF_022845735_14925
        or CLOINNGCF_022845735_19610
    - annotation: !!omap
      - biggr: CYSS_2:2
      - rhea: RHEA:14829
      - sbo: SBO:0000176
  - !!omap
    - id: CYSTL
    - name: cystathionine b-lyase
    - metabolites: !!omap
      - cyst__L_c: -1.0
      - h2o_c: -1.0
      - hcys__L_c: 1.0
      - nh4_c:1: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02585 or CLOINNGCF_022845735_11340
        or CLOINNGCF_022845735_15375 or CLOINNGCF_022845735_15825 or 
        CLOINNGCF_022845735_24815
    - annotation: !!omap
      - biggr: CYSTL
      - rhea: RHEA:13965
      - sbo: SBO:0000176
  - !!omap
    - id: CYSabc
    - name: L-cysteine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: 1.0
      - cys__L_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10885 or CLOINNGCF_022845735_15440
        or CLOINNGCF_022845735_21125 or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: CYSabc
      - sbo: SBO:0000655
  - !!omap
    - id: CYSabc2pp
    - name: L-cysteine export via ABC system (cytoplasm to periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: -1.0
      - cys__L_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01330
    - annotation: !!omap
      - biggr: CYSabc2pp
      - sbo: SBO:0000655
  - !!omap
    - id: CYSabcpp
    - name: L-cysteine uptake via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: 1.0
      - cys__L_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09405 or CLOINNGCF_022845735_21125
    - annotation: !!omap
      - biggr: CYSabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYStpp
    - name: L-cysteine export via facilitated transport
    - metabolites: !!omap
      - cys__L_c: -1.0
      - cys__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13705 or CLOINNGCF_022845735_23120
    - annotation: !!omap
      - biggr: CYStpp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTBD2pp
    - name: 'cytochrome oxidase bd (menaquinol-8: 2 protons) (periplasm)'
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - h_p: 2.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - o2_c: -0.5
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01330
    - annotation: !!omap
      - biggr: CYTBD2pp
      - sbo: SBO:0000655
  - !!omap
    - id: CYTD
    - name: cytidine deaminase
    - metabolites: !!omap
      - cytd_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
      - uri_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12970 or CLOINNGCF_022845735_18425
    - annotation: !!omap
      - biggr: CYTD
      - rhea: RHEA:16069
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDH
    - name: Cytidine hydrolase
    - metabolites: !!omap
      - csn_c: 1.0
      - cytd_c: -1.0
      - h2o_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21765
    - annotation: !!omap
      - biggr: CYTDH
      - rhea: RHEA:27958
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDK1
    - name: cytidine kinase (ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515 or CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: CYTDK1
      - rhea: RHEA:24674
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDK1:2
    - name: cytidine kinase (ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: CYTDK1
      - rhea: RHEA:24674
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDK2_1
    - name: cytidine kinase (GTP)
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515 or CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: CYTDK2_1
      - rhea: RHEA:28162
      - sbo: SBO:0000176
  - !!omap
    - id: CYTDK2_1:2
    - name: cytidine kinase (GTP)
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: CYTDK2_1
      - rhea: RHEA:28162
      - sbo: SBO:0000176
  - !!omap
    - id: CYTK1
    - name: cytidylate kinase (CMP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cdp_c: 1.0
      - cmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12830
    - annotation: !!omap
      - biggr: CYTK1
      - rhea: RHEA:11600
      - sbo: SBO:0000176
  - !!omap
    - id: DGTCY
    - name: DGTP:cytidine 5'-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dgdp_c: 1.0
      - dgtp_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DGTCY
      - sbo: SBO:0000176
  - !!omap
    - id: CYTK2
    - name: cytidylate kinase (dCMP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dcdp_c: 1.0
      - dcmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12830
    - annotation: !!omap
      - biggr: CYTK2
      - rhea: RHEA:25094
      - sbo: SBO:0000176
  - !!omap
    - id: CYTOM
    - name: R_cytosine_5_methyltransferase
    - metabolites: !!omap
      - 5mcsn_c: 1.0
      - ahcys_c: 1.0
      - amet_c: -1.0
      - csn_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13980 or CLOINNGCF_022845735_16130
    - annotation: !!omap
      - biggr: CYTOM
      - sbo: SBO:0000176
  - !!omap
    - id: Clt
    - name: Major Facilitator(MFS) TCDB:2.A.1.14.6
    - metabolites: !!omap
      - cl_c: 1.0
      - cl_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: Clt:2
      - sbo: SBO:0000655
  - !!omap
    - id: Cobalt2abcppI
    - name: Cobalt transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cobalt2_c: 1.0
      - cobalt2_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00815
    - annotation: !!omap
      - biggr: Cobalt2abcppI
      - sbo: SBO:0000655
  - !!omap
    - id: Cotpp
    - name: co transport via diffusion (periplasm to cytosol)
    - metabolites: !!omap
      - co_c: 1.0
      - co_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: Cotpp:2
      - sbo: SBO:0000655
  - !!omap
    - id: Cuabc
    - name: Copper transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cu2_c: 1.0
      - cu2_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14785 or CLOINNGCF_022845735_18570
    - annotation: !!omap
      - biggr: Cuabc
      - sbo: SBO:0000655
  - !!omap
    - id: Cut1
    - name: Copper export via ATPase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cu2_c: -1.0
      - cu2_e: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09140 or CLOINNGCF_022845735_14785
    - annotation: !!omap
      - biggr: Cut1
      - sbo: SBO:0000655
  - !!omap
    - id: DAAOP
    - name: R_D_alanyl_aminopeptidase
    - metabolites: !!omap
      - ala__D_e: 2.0
      - alaala_e: -1.0
      - h2o_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01910
    - annotation: !!omap
      - biggr: DAAOP
      - rhea: RHEA:20661
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DACHpts
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dachi_e: -1.0
      - chtbs6p_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15385 and 
        CLOINNGCF_022845735_15390 and CLOINNGCF_022845735_15395
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DACHpts
      - sbo: SBO:0000655
  - !!omap
    - id: DATCY
    - name: dATP:cytidine 5"-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dadp_c: 1.0
      - datp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DATCY
      - sbo: SBO:0000176
  - !!omap
    - id: DADK
    - name: deoxyadenylate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dadp_c: 1.0
      - damp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04090
    - annotation: !!omap
      - biggr: DADK
      - rhea: RHEA:23100
      - sbo: SBO:0000176
  - !!omap
    - id: DAGK160
    - name: diacylglycerol kinase (n-C16:0)
    - metabolites: !!omap
      - 12dgr160_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pa160_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12975
    - annotation: !!omap
      - biggr: DAGK160
      - rhea: RHEA:63324
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DALAALAD
    - name: Beta alanine L alanine dipeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaala_c: -1.0
      - ala__D_c: 1.0
      - ala__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22935
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DALAALAD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DALADALAD
    - name: Beta alanine beta alanine dipeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balabala_c: -1.0
      - ala__D_c: 2.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22935
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DALADALAD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DALAGLYD
    - name: Beta alanine L glycine dipeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balagly_c: -1.0
      - ala__D_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22935
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DALAGLYD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DALALEUD
    - name: Beta alanine L leucine dipeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__balaleu_c: -1.0
      - ala__D_c: 1.0
      - h2o_c: -1.0
      - leu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22935
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DALALEUD
      - sbo: SBO:0000176
  - !!omap
    - id: DALAabcpp
    - name: D-alanine transport via ABC peptide transporter
    - metabolites: !!omap
      - adp_c: 1.0
      - ala__D_c: 1.0
      - ala__D_p: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03600
    - annotation: !!omap
      - biggr: DALAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: DALAt2r
    - name: D-alanine transport via proton symport
    - metabolites: !!omap
      - ala__D_c: 1.0
      - ala__D_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06970 or CLOINNGCF_022845735_21275
    - annotation: !!omap
      - biggr: DALAt2r
      - sbo: SBO:0000655
  - !!omap
    - id: ADPDA
    - name: R_N6_acetyl_LL_2_6_diaminoheptanedioate_amidohydrolase
    - metabolites: !!omap
      - 26dap_LL_c: 1.0
      - 26dapime_c: -1.0
      - ac_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02205
    - annotation: !!omap
      - biggr: ADPDA
      - rhea: RHEA:20405
      - sbo: SBO:0000176
  - !!omap
    - id: DAPDC
    - name: diaminopimelate decarboxylase
    - metabolites: !!omap
      - 26dap__M_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - lys__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02200
    - annotation: !!omap
      - biggr: DAPDC
      - rhea: RHEA:15101
      - sbo: SBO:0000176
  - !!omap
    - id: DAPE
    - name: diaminopimelate epimerase
    - metabolites: !!omap
      - 26dap_LL_c: -1.0
      - 26dap__M_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02190
    - annotation: !!omap
      - biggr: DAPE
      - rhea: RHEA:15393
      - sbo: SBO:0000176
  - !!omap
    - id: DASYN160
    - name: CDP-diacylglycerol synthetase (n-C16:0)
    - metabolites: !!omap
      - cdpdhdecg_c: 1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - pa160_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03095 or CLOINNGCF_022845735_12190
    - annotation: !!omap
      - biggr: DASYN160
      - sbo: SBO:0000176
  - !!omap
    - id: DATCY:2
    - name: dATP:cytidine 5"-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dadp_c: 1.0
      - datp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DATCY
      - sbo: SBO:0000176
  - !!omap
    - id: DATPHs
    - name: dATP amine hydrolysis (spontaneous)
    - metabolites: !!omap
      - datp_c: -1.0
      - ditp_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: DATPHs
      - sbo: SBO:0000176
  - !!omap
    - id: DAUPP
    - name: dATP:uridine 5"-phosphotransferase
    - metabolites: !!omap
      - dadp_c: 1.0
      - datp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DAUPP
      - sbo: SBO:0000176
  - !!omap
    - id: DAUPP:2
    - name: dATP:uridine 5"-phosphotransferase
    - metabolites: !!omap
      - dadp_c: 1.0
      - datp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DAUPP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DB4PS
    - name: 3,4-Dihydroxy-2-butanone-4-phosphate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__db4p_c: 1.0
      - for_c: 1.0
      - ru5p__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05220
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DB4PS
      - sbo: SBO:0000176
  - !!omap
    - id: DC6PH
    - name: diacetylchitobiose-6-phosphate hydrolase
    - metabolites: !!omap
      - acgam6p_c: 1.0
      - acgam_c: 1.0
      - chtbs6p_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00985
    - annotation: !!omap
      - biggr: DC6PH
      - sbo: SBO:0000176
  - !!omap
    - id: DCMPDA_1
    - name: dCMP deaminase
    - metabolites: !!omap
      - dcmp_c: -1.0
      - dump_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06715 or CLOINNGCF_022845735_11315
    - annotation: !!omap
      - biggr: DCMPDA_1
      - rhea: RHEA:22924
      - sbo: SBO:0000176
  - !!omap
    - id: DCTCP
    - name: dCTP:cytidine 5"-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dcdp_c: 1.0
      - dctp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DCTCP
      - sbo: SBO:0000176
  - !!omap
    - id: DCTCP:2
    - name: dCTP:cytidine 5"-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dcdp_c: 1.0
      - dctp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DCTCP
      - sbo: SBO:0000176
  - !!omap
    - id: DCTPD
    - name: dCTP deaminase
    - metabolites: !!omap
      - dctp_c: -1.0
      - dutp_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06715
    - annotation: !!omap
      - biggr: DCTPD
      - rhea: RHEA:22680
      - sbo: SBO:0000176
  - !!omap
    - id: DCTUP
    - name: DCTP:uridine 5'-phosphotransferase
    - metabolites: !!omap
      - dcdp_c: 1.0
      - dctp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DCTUP
      - sbo: SBO:0000176
  - !!omap
    - id: DCYTD
    - name: deoxycytidine deaminase
    - metabolites: !!omap
      - dcyt_c: -1.0
      - duri_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06715 or CLOINNGCF_022845735_12970
    - annotation: !!omap
      - biggr: DCYTD
      - rhea: RHEA:13433
      - sbo: SBO:0000176
  - !!omap
    - id: DCYTt2
    - name: deoxycytidine transport in via proton symport
    - metabolites: !!omap
      - dcyt_c: 1.0
      - dcyt_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DCYTt2
      - sbo: SBO:0000655
  - !!omap
    - id: DDPA
    - name: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase
    - metabolites: !!omap
      - 2dda7p_c: 1.0
      - e4p_c: -1.0
      - h2o_c: -1.0
      - pep_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00570 or CLOINNGCF_022845735_12480
    - annotation: !!omap
      - biggr: DDPA
      - rhea: RHEA:14717
      - sbo: SBO:0000176
  - !!omap
    - id: DGK1
    - name: deoxyguanylate kinase (dGMP:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dgdp_c: 1.0
      - dgmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10385
    - annotation: !!omap
      - biggr: DGK1
      - rhea: RHEA:12697
      - sbo: SBO:0000176
  - !!omap
    - id: DGTCY:2
    - name: DGTP:cytidine 5'-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dgdp_c: 1.0
      - dgtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DGTCY
      - sbo: SBO:0000176
  - !!omap
    - id: DGTUP
    - name: DGTP:uridine 5'-phosphotransferase
    - metabolites: !!omap
      - dgdp_c: 1.0
      - dgtp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DGTUP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DGUNC
    - name: Diguanylate cyclase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__cdigmp_c: 1.0
      - gtp_c: -2.0
      - ppi_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03485 or CLOINNGCF_022845735_04520
        or CLOINNGCF_022845735_07030 or CLOINNGCF_022845735_08040 or 
        CLOINNGCF_022845735_09185 or CLOINNGCF_022845735_09760 or 
        CLOINNGCF_022845735_09800 or CLOINNGCF_022845735_10145 or 
        CLOINNGCF_022845735_10150 or CLOINNGCF_022845735_10895 or 
        CLOINNGCF_022845735_11250 or CLOINNGCF_022845735_13040 or 
        CLOINNGCF_022845735_14960 or CLOINNGCF_022845735_15265 or 
        CLOINNGCF_022845735_15365 or CLOINNGCF_022845735_16590 or 
        CLOINNGCF_022845735_25045
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DGUNC
      - sbo: SBO:0000176
  - !!omap
    - id: DGTUP:2
    - name: DGTP:uridine 5'-phosphotransferase
    - metabolites: !!omap
      - dgdp_c: 1.0
      - dgtp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DGTUP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DH23t
    - name: ''
    - metabolites: !!omap
      - 23dhb_c: -1.0
      - __iPKB_Clostridiaceae__d23hb_e: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DH23t
      - sbo: SBO:0000655
  - !!omap
    - id: DHAD1
    - name: dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
    - metabolites: !!omap
      - 23dhmb_c: -1.0
      - 3mob_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10930
    - annotation: !!omap
      - biggr: DHAD1
      - rhea: RHEA:24809
      - sbo: SBO:0000176
  - !!omap
    - id: DHAD2
    - name: Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)
    - metabolites: !!omap
      - 23dhmp_c: -1.0
      - 3mop_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10930
    - annotation: !!omap
      - biggr: DHAD2
      - rhea: RHEA:27694
      - sbo: SBO:0000176
  - !!omap
    - id: DHAK
    - name: dihydroxyacetone kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dha_c: -1.0
      - dhap_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02860
    - annotation: !!omap
      - biggr: DHAK
      - rhea: RHEA:15773
      - sbo: SBO:0000176
  - !!omap
    - id: DHAPT
    - name: Dihydroxyacetone phosphotransferase
    - metabolites: !!omap
      - dha_c: -1.0
      - dhap_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01620 or 
        (CLOINNGCF_022845735_01625 and CLOINNGCF_022845735_02075) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945 and 
        CLOINNGCF_022845735_23900)
    - annotation: !!omap
      - biggr: DHAPT
      - rhea: RHEA:18381
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DHBD
    - name: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
    - metabolites: !!omap
      - 23dhb_c: 1.0
      - __iPKB_Clostridiaceae__23ddhb_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16825
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DHBD
      - sbo: SBO:0000176
  - !!omap
    - id: DHDPRx_r
    - name: Dihydrodipicolinate reductase (NADH) reversible
    - metabolites: !!omap
      - 23dhdp_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - thdp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02180
    - annotation: !!omap
      - biggr: DHDPRx_r
      - sbo: SBO:0000176
  - !!omap
    - id: DHDPRy
    - name: dihydrodipicolinate reductase (NADPH)
    - metabolites: !!omap
      - 23dhdp_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - thdp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02180
    - annotation: !!omap
      - biggr: DHDPRy
      - sbo: SBO:0000176
  - !!omap
    - id: DHDPS
    - name: dihydrodipicolinate synthase
    - metabolites: !!omap
      - 23dhdp_c: 1.0
      - aspsa_c: -1.0
      - h2o_c: 2.0
      - h_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02185 or CLOINNGCF_022845735_12335
        or CLOINNGCF_022845735_21015
    - annotation: !!omap
      - biggr: DHDPS
      - rhea: RHEA:14845
      - sbo: SBO:0000176
  - !!omap
    - id: DHFR
    - name: dihydrofolate reductase
    - metabolites: !!omap
      - dhf_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - thf_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12385 or CLOINNGCF_022845735_20425
        or CLOINNGCF_022845735_24715
    - annotation: !!omap
      - biggr: DHFR
      - rhea: RHEA:15009
      - sbo: SBO:0000176
  - !!omap
    - id: DHFS
    - name: dihydrofolate synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dhf_c: 1.0
      - dhpt_c: -1.0
      - glu__L_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02560
    - annotation: !!omap
      - biggr: DHFS
      - rhea: RHEA:23584
      - sbo: SBO:0000176
  - !!omap
    - id: DHNAOT_1
    - name: 1 4 dihydroxy 2 naphthoate octaprenyltransferase
    - metabolites: !!omap
      - 2dmmq8_c: 1.0
      - co2_c: 1.0
      - dhna_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - octdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DHNAOT_1
      - sbo: SBO:0000176
  - !!omap
    - id: DHNPA2r
    - name: dihydroneopterin aldolase reversible
    - metabolites: !!omap
      - 2ahhmp_c: 1.0
      - dhnpt_c: -1.0
      - gcald_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DHNPA2r
      - sbo: SBO:0000176
  - !!omap
    - id: DHORD5
    - name: dihydroorotic acid (menaquinone-8)
    - metabolites: !!omap
      - dhor__S_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - orot_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23005
    - annotation: !!omap
      - biggr: DHORD5
      - rhea: RHEA:29199
      - sbo: SBO:0000176
  - !!omap
    - id: DHORD_NAD
    - name: dihydoorotic acid dehydrogenase NAD
    - metabolites: !!omap
      - dhor__S_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - orot_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14580 and 
        CLOINNGCF_022845735_14585
    - annotation: !!omap
      - biggr: DHORD_NAD
      - rhea: RHEA:13513
      - sbo: SBO:0000176
  - !!omap
    - id: DHORDi
    - name: R_dihydoorotic_acid_dehydrogenase__irreversible_
    - metabolites: !!omap
      - dhor__S_c: -1.0
      - h2o2_c: 1.0
      - o2_c: -1.0
      - orot_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14580 and 
        CLOINNGCF_022845735_14585
    - annotation: !!omap
      - biggr: DHORDi
      - sbo: SBO:0000176
  - !!omap
    - id: DHORTS
    - name: dihydroorotase
    - metabolites: !!omap
      - cbasp_c: 1.0
      - dhor__S_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13765 or CLOINNGCF_022845735_14600
        or CLOINNGCF_022845735_15065
    - annotation: !!omap
      - biggr: DHORTS
      - rhea: RHEA:24296
      - sbo: SBO:0000176
  - !!omap
    - id: DHPM1
    - name: dihydropyrimidinase (5,6-dihydrouracil)
    - metabolites: !!omap
      - 56dura_c: -1.0
      - cala_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08860
    - annotation: !!omap
      - biggr: DHPM1
      - rhea: RHEA:16121
      - sbo: SBO:0000176
  - !!omap
    - id: DHPPDA2
    - name: diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)
    - metabolites: !!omap
      - 25drapp_c:-2: -1.0
      - 5apru_c: 1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05210
    - annotation: !!omap
      - biggr: DHPPDA2
      - rhea: RHEA:21868
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DHPPDA2
    - name: Diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)
    - metabolites: !!omap
      - 5apru_c: 1.0
      - __iPKB_Clostridiaceae__25drapp_DUP1_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09220
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DHPPDA2
      - sbo: SBO:0000176
  - !!omap
    - id: DHPS
    - name: R_dihydropteroate_synthase
    - metabolites: !!omap
      - 2ahhmp_c: -1.0
      - 4abz_c: -1.0
      - dhpt_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DHPS
      - sbo: SBO:0000176
  - !!omap
    - id: DHPTDCs2
    - name: 4,5-dihydroxy-2,3-pentanedione cyclization (spontaneous)
    - metabolites: !!omap
      - dhptd_c: -1.0
      - mdhdhf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: DHPTDCs2
      - rhea: RHEA:35155
      - sbo: SBO:0000176
  - !!omap
    - id: DHQS
    - name: 3-dehydroquinate synthase
    - metabolites: !!omap
      - 2dda7p_c: -1.0
      - 3dhq_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00580
    - annotation: !!omap
      - biggr: DHQS
      - rhea: RHEA:21968
      - sbo: SBO:0000176
  - !!omap
    - id: DHQTi
    - name: 3-dehydroquinate dehydratase, irreversible
    - metabolites: !!omap
      - 3dhq_c: -1.0
      - 3dhsk_c: 1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12525 or CLOINNGCF_022845735_15010
        or CLOINNGCF_022845735_23255
    - annotation: !!omap
      - biggr: DHQTi
      - rhea: RHEA:21096
      - sbo: SBO:0000176
  - !!omap
    - id: DIPEPabc1
    - name: R_Dipeptide_transport_via_ABC_system__ala_asp_
    - metabolites: !!omap
      - adp_c: 1.0
      - ala_L_asp__L_c: 1.0
      - ala_L_asp__L_e: -1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: DIPEPabc1
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DIPEPabc10
    - name: Dipeptide transport via ABC system  gly glu
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_glu__L_c: 1.0
      - __iPKB_Clostridiaceae__gly_glu__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DIPEPabc10
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DIPEPabc12
    - name: Dipeptide transport via ABC system  met ala
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__met_L_ala__L_c: 1.0
      - __iPKB_Clostridiaceae__met_L_ala__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DIPEPabc12
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DIPEPabc13
    - name: Dipeptide transport via ABC system  gly asp
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_asp__L_c: 1.0
      - __iPKB_Clostridiaceae__gly_asp__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DIPEPabc13
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DIPEPabc14
    - name: Dipeptide transport via ABC system  gly pro L
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_pro__L_c: 1.0
      - __iPKB_Clostridiaceae__gly_pro__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DIPEPabc14
      - sbo: SBO:0000655
  - !!omap
    - id: DIPEPabc15
    - name: R_Dipeptide_transport_via_ABC_system__cgly_
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cgly_c: 1.0
      - cgly_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: DIPEPabc15
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DIPEPabc3
    - name: Dipeptide transport via ABC system  ala glu
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ala_L_glu__L_c: 1.0
      - __iPKB_Clostridiaceae__ala_L_glu__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DIPEPabc3
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DIPEPabc8
    - name: Dipeptide transport via ABC system  gly asn
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_asn__L_c: 1.0
      - __iPKB_Clostridiaceae__gly_asn__L_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03610 and 
        CLOINNGCF_022845735_03615 and CLOINNGCF_022845735_03620 and 
        CLOINNGCF_022845735_03685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DIPEPabc8
      - sbo: SBO:0000655
  - !!omap
    - id: DMATT
    - name: dimethylallyltranstransferase
    - metabolites: !!omap
      - dmpp_c: -1.0
      - grdp_c: 1.0
      - ipdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12670
    - annotation: !!omap
      - biggr: DMATT
      - rhea: RHEA:22408
      - sbo: SBO:0000176
  - !!omap
    - id: DMPPS
    - name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)
    - metabolites: !!omap
      - dmpp_c: 1.0
      - h2mb4p_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12275 or CLOINNGCF_022845735_12930
    - annotation: !!omap
      - biggr: DMPPS
      - sbo: SBO:0000176
  - !!omap
    - id: DNADDP
    - name: Deaminido NAD diphosphatase
    - metabolites: !!omap
      - amp_c: 1.0
      - dnad_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nicrnt_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02150
    - annotation: !!omap
      - biggr: DNADDP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DNMPPA
    - name: Dihydroneopterin monophosphate dephosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dhpmp_c: -1.0
      - dhnpt_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02615 or CLOINNGCF_022845735_05570
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DNMPPA
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DNTPPA
    - name: Dihydroneopterin triphosphate pyrophosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dhpmp_c: 1.0
      - ahdt_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02615 or CLOINNGCF_022845735_05570
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DNTPPA
      - sbo: SBO:0000176
  - !!omap
    - id: DPCOAK
    - name: dephospho-CoA kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - coa_c: 1.0
      - dpcoa_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10600
    - annotation: !!omap
      - biggr: DPCOAK
      - rhea: RHEA:18245
      - sbo: SBO:0000176
  - !!omap
    - id: DPR
    - name: 2-dehydropantoate 2-reductase
    - metabolites: !!omap
      - 2dhp_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pant__R_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10925 or CLOINNGCF_022845735_23265
    - annotation: !!omap
      - biggr: DPR
      - rhea: RHEA:16233
      - sbo: SBO:0000176
  - !!omap
    - id: DRBK
    - name: Deoxyribokinase
    - metabolites: !!omap
      - 2dr5p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - drib_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14680
    - annotation: !!omap
      - biggr: DRBK
      - rhea: RHEA:30871
      - sbo: SBO:0000176
  - !!omap
    - id: DRBK:2
    - name: Deoxyribokinase
    - metabolites: !!omap
      - 2dr5p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - drib_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02620
    - annotation: !!omap
      - biggr: DRBK
      - rhea: RHEA:30871
      - sbo: SBO:0000176
  - !!omap
    - id: DRIBabc
    - name: R_Deoxyribose_transport_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - drib_c: 1.0
      - drib_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05600 and 
        CLOINNGCF_022845735_11935
    - annotation: !!omap
      - biggr: DRIBabc
      - sbo: SBO:0000655
  - !!omap
    - id: DRIBtex_1
    - name: 5-Deoxy-D-ribose transport by diffusion
    - metabolites: !!omap
      - 5drib_c: -1.0
      - 5drib_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DRIBtex_1
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__DRPA
    - name: Deoxyribose-phosphate aldolase
    - metabolites: !!omap
      - 2dr5p_c: -1.0
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - acald_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_20090 or CLOINNGCF_022845735_20225
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DRPA
      - sbo: SBO:0000176
  - !!omap
    - id: DRU1Ptex
    - name: S-methyl-5-thio-D-ribose 1-phosphate transport via diffusion
    - metabolites: !!omap
      - 5mdru1p_c: -1.0
      - 5mdru1p_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DRU1Ptex
      - sbo: SBO:0000655
  - !!omap
    - id: DSERDHr
    - name: D-serine dehydrogenase
    - metabolites: !!omap
      - 2amsa_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ser__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02840
    - annotation: !!omap
      - biggr: DSERDHr
      - rhea: RHEA:30107
      - sbo: SBO:0000176
  - !!omap
    - id: DSERt2
    - name: D-serine transport via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - ser__D_c: 1.0
      - ser__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06970
    - annotation: !!omap
      - biggr: DSERt2
      - sbo: SBO:0000655
  - !!omap
    - id: DTMPK
    - name: dTMP kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dtdp_c: 1.0
      - dtmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00135
    - annotation: !!omap
      - biggr: DTMPK
      - rhea: RHEA:13517
      - sbo: SBO:0000176
  - !!omap
    - id: CDDTPP:2
    - name: DTTP:cytidine 5'-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dtdp_c: 1.0
      - dttp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: CDDTPP
      - sbo: SBO:0000176
  - !!omap
    - id: DTTUP
    - name: DTTP:uridine 5'-phosphotransferase
    - metabolites: !!omap
      - dtdp_c: 1.0
      - dttp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DTTUP
      - sbo: SBO:0000176
  - !!omap
    - id: DTTUP:2
    - name: DTTP:uridine 5'-phosphotransferase
    - metabolites: !!omap
      - dtdp_c: 1.0
      - dttp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DTTUP
      - sbo: SBO:0000176
  - !!omap
    - id: DUTCP
    - name: DUTP:cytidine 5'-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dudp_c: 1.0
      - dutp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DUTCP
      - sbo: SBO:0000176
  - !!omap
    - id: DURADx
    - name: dihydrouracil dehydrogenase (NAD)
    - metabolites: !!omap
      - 56dura_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - ura_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: DURADx
      - rhea: RHEA:20189
      - sbo: SBO:0000176
  - !!omap
    - id: DURIK1
    - name: deoxyuridine kinase (ATP:Deoxyuridine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dump_c: 1.0
      - duri_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02025
    - annotation: !!omap
      - biggr: DURIK1
      - rhea: RHEA:28206
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DURIPP
    - name: Deoxyuridine phosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - duri_c: -1.0
      - pi_c: -1.0
      - ura_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_12390
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DURIPP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DURIPP:2
    - name: Deoxyuridine phosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - duri_c: -1.0
      - pi_c: -1.0
      - ura_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12390 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DURIPP
      - sbo: SBO:0000176
  - !!omap
    - id: DUTCP:2
    - name: DUTP:cytidine 5'-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - dudp_c: 1.0
      - dutp_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DUTCP
      - sbo: SBO:0000176
  - !!omap
    - id: DUTPDP
    - name: dUTP diphosphatase
    - metabolites: !!omap
      - dump_c: 1.0
      - dutp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11240
    - annotation: !!omap
      - biggr: DUTPDP
      - rhea: RHEA:10248
      - sbo: SBO:0000176
  - !!omap
    - id: DUUPP
    - name: dUTP:uridine 5"-phosphotransferase
    - metabolites: !!omap
      - dudp_c: 1.0
      - dutp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: DUUPP
      - sbo: SBO:0000176
  - !!omap
    - id: DUUPP:2
    - name: dUTP:uridine 5"-phosphotransferase
    - metabolites: !!omap
      - dudp_c: 1.0
      - dutp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DUUPP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DXPRIi
    - name: 1-deoxy-D-xylulose reductoisomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2me4p_c: 1.0
      - dxyl5p_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DXPRIi
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__DXPS
    - name: 1-deoxy-D-xylulose 5-phosphate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: -1.0
      - co2_c: 1.0
      - dxyl5p_c: 1.0
      - h_c: -1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12675
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__DXPS
      - sbo: SBO:0000176
  - !!omap
    - id: E4PD
    - name: Erythrose 4-phosphate dehydrogenase
    - metabolites: !!omap
      - 4per_c: 1.0
      - e4p_c: -1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: E4PD
      - rhea: RHEA:12056
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH7
    - name: 3-hydroxyacyl-CoA dehydratase (3-hydroxyhexadecanoyl-CoA)
    - metabolites: !!omap
      - 3hhdcoa_c: -1.0
      - h2o_c: 1.0
      - hdd2coa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ECOAH7
      - rhea: RHEA:31163
      - sbo: SBO:0000176
  - !!omap
    - id: ECOAH9ir
    - name: R_2_Methylprop_2_enoyl_CoA__2_Methylbut_2_enoyl_CoA_
    - metabolites: !!omap
      - 2mb2coa_c: -1.0
      - 3hmbcoa_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13855
    - annotation: !!omap
      - biggr: ECOAH9ir
      - rhea: RHEA:31119
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__EDA
    - name: 2-dehydro-3-deoxy-phosphogluconate aldolase
    - metabolites: !!omap
      - 2ddg6p_c: -1.0
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01155 or CLOINNGCF_022845735_03300
        or CLOINNGCF_022845735_03390 or CLOINNGCF_022845735_18995 or 
        CLOINNGCF_022845735_22770
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__EDA
      - sbo: SBO:0000176
  - !!omap
    - id: EDD
    - name: 6-phosphogluconate dehydratase
    - metabolites: !!omap
      - 2ddg6p_c: 1.0
      - 6pgc_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10930
    - annotation: !!omap
      - biggr: EDD
      - rhea: RHEA:17277
      - sbo: SBO:0000176
  - !!omap
    - id: ENO
    - name: enolase
    - metabolites: !!omap
      - 2pg_c: -1.0
      - h2o_c: 1.0
      - pep_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21575
    - annotation: !!omap
      - biggr: ENO
      - rhea: RHEA:10164
      - sbo: SBO:0000176
  - !!omap
    - id: F1PP
    - name: D-fructose 1-phosphate phosphatase
    - metabolites: !!omap
      - f1p_c: -1.0
      - fru_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430 or CLOINNGCF_022845735_04510
        or CLOINNGCF_022845735_07735 or CLOINNGCF_022845735_10750
    - annotation: !!omap
      - biggr: F1PP
      - sbo: SBO:0000176
  - !!omap
    - id: F6PP
    - name: D-fructose 6-phosphate phosphatase
    - metabolites: !!omap
      - f6p_c: -1.0
      - fru_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430 or CLOINNGCF_022845735_04510
        or CLOINNGCF_022845735_05880 or CLOINNGCF_022845735_07735 or 
        CLOINNGCF_022845735_10750
    - annotation: !!omap
      - biggr: F6PP
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAE160
    - name: fatty-acid-CoA thioesterase (hexadecanoate)
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - hdca_c: 1.0
      - pmtcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FACOAE160
      - rhea: RHEA:16645
      - sbo: SBO:0000176
  - !!omap
    - id: FACOAL140
    - name: R_fatty_acid__CoA_ligase__tetradecanoate_
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -1.0
      - ppi_c: 1.0
      - tdcoa_c: 1.0
      - ttdca_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FACOAL140
      - rhea: RHEA:33619
      - sbo: SBO:0000176
  - !!omap
    - id: FADMQOR
    - name: Menaquinone:FAD oxidoreductase
    - metabolites: !!omap
      - fad_c: 1.0
      - fadh2_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13865
    - annotation: !!omap
      - biggr: FADMQOR:3
      - sbo: SBO:0000176
  - !!omap
    - id: FADt
    - name: FAD transporter, periplasm
    - metabolites: !!omap
      - fad_c: -1.0
      - fad_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06690
    - annotation: !!omap
      - biggr: FADt:3
      - sbo: SBO:0000655
  - !!omap
    - id: FADtex
    - name: FAD transport, outer membrane
    - metabolites: !!omap
      - fad_e: 1.0
      - fad_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FADtex:3
      - sbo: SBO:0000655
  - !!omap
    - id: FALDM
    - name: R_formaldehyde_dismutase
    - metabolites: !!omap
      - fald_c: -2.0
      - for_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - meoh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FALDM
      - rhea: RHEA:19221
      - sbo: SBO:0000176
  - !!omap
    - id: FALDtpp
    - name: formaldehyde transport via diffusion (periplasm)
    - metabolites: !!omap
      - fald_c: 1.0
      - fald_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: FALDtpp
      - sbo: SBO:0000655
  - !!omap
    - id: FALDtpp2
    - name: R_formaldehyde_extrusion__pp_
    - metabolites: !!omap
      - fald_c: -1.0
      - fald_p: 1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14530
    - annotation: !!omap
      - biggr: FALDtpp2
      - sbo: SBO:0000655
  - !!omap
    - id: FAO2
    - name: Fatty acid oxidation (n-C16:0)
    - metabolites: !!omap
      - accoa_c: 8.0
      - amp_c: 1.0
      - atp_c: -1.0
      - coa_c: -8.0
      - fad_c: -7.0
      - fadh2_c: 7.0
      - h2o_c: -7.0
      - h_c: 7.0
      - hdca_c: -1.0
      - nad_c: -7.0
      - nadh_c: 7.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FAO2:3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FBA
    - name: Fructose-bisphosphate aldolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: -1.0
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - dhap_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01760 or CLOINNGCF_022845735_03350
        or CLOINNGCF_022845735_03710 or CLOINNGCF_022845735_03765 or 
        CLOINNGCF_022845735_14505 or CLOINNGCF_022845735_24140 or 
        CLOINNGCF_022845735_24740 or CLOINNGCF_022845735_24910
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FBA
      - sbo: SBO:0000176
  - !!omap
    - id: FBA2
    - name: R_D_Fructose_1_phosphate_D_glyceraldehyde_3_phosphate_lyase
    - metabolites: !!omap
      - dhap_c: 1.0
      - f1p_c: -1.0
      - glyald_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01760 or CLOINNGCF_022845735_03350
        or CLOINNGCF_022845735_03710 or CLOINNGCF_022845735_03765 or 
        CLOINNGCF_022845735_14505 or CLOINNGCF_022845735_24140 or 
        CLOINNGCF_022845735_24740
    - annotation: !!omap
      - biggr: FBA2
      - rhea: RHEA:30851
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FBA3
    - name: Sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__s17bp_c: -1.0
      - dhap_c: 1.0
      - e4p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03350 or CLOINNGCF_022845735_03710
        or CLOINNGCF_022845735_03765 or CLOINNGCF_022845735_14505 or 
        CLOINNGCF_022845735_24140
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FBA3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FBP
    - name: Fructose-bisphosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: -1.0
      - f6p_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07735
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FBP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FCLPA
    - name: L-fuculose 1-phosphate aldolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fc1p_c: -1.0
      - dhap_c: 1.0
      - lald__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02065 or CLOINNGCF_022845735_18615
        or CLOINNGCF_022845735_22035
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FCLPA
      - sbo: SBO:0000176
  - !!omap
    - id: FCLT
    - name: Ferrochelatase
    - metabolites: !!omap
      - fe2_c: -1.0
      - h_c: 2.0
      - pheme_c: 1.0
      - ppp9_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FCLT
      - rhea: RHEA:22584
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FDMO6_1
    - name: FMN dependent monooxygenase  isethionate
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fmnRD_c: -1.0
      - fmn_c: 1.0
      - gcald_c: 1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - isetac_c: -1.0
      - o2_c: -1.0
      - so3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FDMO6_1
      - sbo: SBO:0000176
  - !!omap
    - id: FE2Gabcpp
    - name: iron (II) transport via ABC system (GTP) (periplasm)
    - metabolites: !!omap
      - fe2_c: 1.0
      - fe2_p: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01680 or CLOINNGCF_022845735_12825
    - annotation: !!omap
      - biggr: FE2Gabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: FE2abc
    - name: iron (II) transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fe2_c: 1.0
      - fe2_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00940 or CLOINNGCF_022845735_10405
        or CLOINNGCF_022845735_12365 or CLOINNGCF_022845735_14760 or 
        (CLOINNGCF_022845735_10400 and CLOINNGCF_022845735_10405)
    - annotation: !!omap
      - biggr: FE2abc
      - sbo: SBO:0000655
  - !!omap
    - id: FE2abcpp
    - name: iron (II) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fe2_c: 1.0
      - fe2_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01680 or CLOINNGCF_022845735_10405
    - annotation: !!omap
      - biggr: FE2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: FE2t
    - name: iron (II) transport
    - metabolites: !!omap
      - fe2_c: 1.0
      - fe2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06955 or CLOINNGCF_022845735_10405
        or CLOINNGCF_022845735_11000 or CLOINNGCF_022845735_13890 or 
        CLOINNGCF_022845735_13895 or CLOINNGCF_022845735_14760 or 
        CLOINNGCF_022845735_14765 or CLOINNGCF_022845735_14770 or 
        CLOINNGCF_022845735_15205
    - annotation: !!omap
      - biggr: FE2t
      - sbo: SBO:0000655
  - !!omap
    - id: FE2tex
    - name: iron (II) transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fe2_e: -1.0
      - fe2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01680
    - annotation: !!omap
      - biggr: FE2tex
      - sbo: SBO:0000655
  - !!omap
    - id: FE2tpp
    - name: iron (+2) transport in via permease (no H+)
    - metabolites: !!omap
      - fe2_c: 1.0
      - fe2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08540
    - annotation: !!omap
      - biggr: FE2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: FE3Gabcpp
    - name: iron (III) transport via ABC system (GTP) (periplasm)
    - metabolites: !!omap
      - fe3_c: 1.0
      - fe3_p: -1.0
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12825
    - annotation: !!omap
      - biggr: FE3Gabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__FE3PYOVDL2
    - name: Ferripyoverdine complex formation  P putida KT2440 specific
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fe3pyovd_kt_e: 1.0
      - __iPKB_Clostridiaceae__pyovd_kt_e: -1.0
      - fe3_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FE3PYOVDL2
      - sbo: SBO:0000176
  - !!omap
    - id: FE3abc
    - name: ferrichrome transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fe3_c: 1.0
      - fe3_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02520 or CLOINNGCF_022845735_02525
        or CLOINNGCF_022845735_02530 or CLOINNGCF_022845735_04260 or 
        (CLOINNGCF_022845735_02520 and CLOINNGCF_022845735_02525) or 
        (CLOINNGCF_022845735_02520 and CLOINNGCF_022845735_02530) or 
        (CLOINNGCF_022845735_02525 and CLOINNGCF_022845735_02530) or 
        (CLOINNGCF_022845735_02520 and CLOINNGCF_022845735_02525 and 
        CLOINNGCF_022845735_02530)
    - annotation: !!omap
      - biggr: FE3abc
      - sbo: SBO:0000655
  - !!omap
    - id: FE3abcpp
    - name: iron (III) transport via ABC system (periplasm to cytoplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - fe3_c: 1.0
      - fe3_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09070
    - annotation: !!omap
      - biggr: FE3abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: FEDCabc
    - name: Iron  III  dicitrate transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cit_c: 2.0
      - cit_e: -2.0
      - fe3_c: 1.0
      - fe3_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02530 or CLOINNGCF_022845735_03215
        or (CLOINNGCF_022845735_02520 and CLOINNGCF_022845735_02530) or 
        (CLOINNGCF_022845735_02520 and CLOINNGCF_022845735_03215)
    - annotation: !!omap
      - biggr: FEDCabc
      - sbo: SBO:0000655
  - !!omap
    - id: FEROpp
    - name: ferroxidase
    - metabolites: !!omap
      - fe2_p: -4.0
      - fe3_p: 4.0
      - h2o_p: 2.0
      - h_p: -4.0
      - o2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FEROpp
      - rhea: RHEA:11148
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FFSD
    - name: Beta-fructofuranosidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__suc6p_c: -1.0
      - fru_c: 1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19050
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FFSD
      - sbo: SBO:0000176
  - !!omap
    - id: FFSD1r
    - name: Beta-fructofuranosidase
    - metabolites: !!omap
      - fru_c: 1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
      - tre6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01975
    - annotation: !!omap
      - biggr: FFSD1r
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FFSD_2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fru_B_c: 1.0
      - __iPKB_Clostridiaceae__suc6p_c: -1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19050
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FFSD_2
      - sbo: SBO:0000176
  - !!omap
    - id: FMNAT
    - name: FMN adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - fad_c: 1.0
      - fmn_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12630
    - annotation: !!omap
      - biggr: FMNAT:4
      - rhea: RHEA:17237
      - sbo: SBO:0000176
  - !!omap
    - id: FMNRx2
    - name: FMN reductase
    - metabolites: !!omap
      - fmn_c: -1.0
      - fmnh2_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01955 or CLOINNGCF_022845735_06775
    - annotation: !!omap
      - biggr: FMNRx2:3
      - rhea: RHEA:21624
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FMNRy
    - name: FMN reductase  NADPH dependent
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fmnRD_c: 1.0
      - fmn_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00110
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FMNRy
      - sbo: SBO:0000176
  - !!omap
    - id: FMNt
    - name: FMN transporter, periplasm
    - metabolites: !!omap
      - fmn_c: -1.0
      - fmn_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06690
    - annotation: !!omap
      - biggr: FMNt:3
      - sbo: SBO:0000655
  - !!omap
    - id: FMNtex
    - name: FMN transport, outer membrane
    - metabolites: !!omap
      - fmn_e: 1.0
      - fmn_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FMNtex:3
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__FNRR3
    - name: ''
    - metabolites: !!omap
      - fdxox_c: -1.0
      - fdxrd_c: 1.0
      - h2_c: -1.0
      - h_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09200 or CLOINNGCF_022845735_19115
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FNRR3
      - sbo: SBO:0000176
  - !!omap
    - id: FOLR2_1
    - name: Folate reductase
    - metabolites: !!omap
      - dhf_c: 1.0
      - fol_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12385
    - annotation: !!omap
      - biggr: FOLR2_1
      - rhea: RHEA:31103
      - sbo: SBO:0000176
  - !!omap
    - id: FRD2rpp
    - name: Fumarate reductase / succinate dehydrogenase (irreversible) 
        (periplasmic, membrane potential dissipating)
    - metabolites: !!omap
      - fum_c: 1.0
      - h_c: 2.0
      - h_p: -2.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - succ_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00720
    - annotation: !!omap
      - biggr: FRD2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: FRTT
    - name: R_farnesyltranstransferase
    - metabolites: !!omap
      - frdp_c: -1.0
      - ggdp_c: 1.0
      - ipdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12670
    - annotation: !!omap
      - biggr: FRTT
      - rhea: RHEA:17653
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FRUK
    - name: Fructose-1-phosphate kinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - f1p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19130 or CLOINNGCF_022845735_19970
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FRUK
      - sbo: SBO:0000176
  - !!omap
    - id: FRUpts
    - name: D-fructose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - f1p_c: 1.0
      - fru_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00205 or CLOINNGCF_022845735_02980
        or (CLOINNGCF_022845735_01820 and CLOINNGCF_022845735_21055) or 
        (CLOINNGCF_022845735_05520 and CLOINNGCF_022845735_05525) or 
        (CLOINNGCF_022845735_23760 and CLOINNGCF_022845735_23765) or 
        (CLOINNGCF_022845735_23960 and CLOINNGCF_022845735_23965) or 
        (CLOINNGCF_022845735_00200 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_02980 and 
        CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14740 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_14745 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14750 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_19545 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_10365 and CLOINNGCF_022845735_22660 and 
        CLOINNGCF_022845735_22665) or (CLOINNGCF_022845735_03280 and 
        CLOINNGCF_022845735_18985 and CLOINNGCF_022845735_23500 and 
        CLOINNGCF_022845735_23510) or (CLOINNGCF_022845735_04420 and 
        CLOINNGCF_022845735_08825 and CLOINNGCF_022845735_22145 and 
        CLOINNGCF_022845735_23400) or (CLOINNGCF_022845735_14630 and 
        CLOINNGCF_022845735_14635 and CLOINNGCF_022845735_14640 and 
        CLOINNGCF_022845735_14650) or (CLOINNGCF_022845735_04525 and 
        CLOINNGCF_022845735_04535 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945 and CLOINNGCF_022845735_23515)
    - annotation: !!omap
      - biggr: FRUpts
      - sbo: SBO:0000655
  - !!omap
    - id: FRUpts2
    - name: Fructose transport via PEP:Pyr PTS (f6p generating)
    - metabolites: !!omap
      - f6p_c: 1.0
      - fru_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00205 or 
        (CLOINNGCF_022845735_05520 and CLOINNGCF_022845735_05525) or 
        (CLOINNGCF_022845735_23760 and CLOINNGCF_022845735_23765) or 
        (CLOINNGCF_022845735_01820 and CLOINNGCF_022845735_02980 and 
        CLOINNGCF_022845735_21055) or (CLOINNGCF_022845735_10365 and 
        CLOINNGCF_022845735_22660 and CLOINNGCF_022845735_22665) or 
        (CLOINNGCF_022845735_03280 and CLOINNGCF_022845735_18985 and 
        CLOINNGCF_022845735_23500 and CLOINNGCF_022845735_23510) or 
        (CLOINNGCF_022845735_04420 and CLOINNGCF_022845735_08825 and 
        CLOINNGCF_022845735_22145 and CLOINNGCF_022845735_23400) or 
        (CLOINNGCF_022845735_14630 and CLOINNGCF_022845735_14635 and 
        CLOINNGCF_022845735_14640 and CLOINNGCF_022845735_14650)
    - annotation: !!omap
      - biggr: FRUpts2
      - sbo: SBO:0000655
  - !!omap
    - id: FRUpts2pp
    - name: Fructose transport via PEP:Pyr PTS (f6p generating) (periplasm)
    - metabolites: !!omap
      - f6p_c: 1.0
      - fru_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_01280 and 
        CLOINNGCF_022845735_22130) or (CLOINNGCF_022845735_04535 and 
        CLOINNGCF_022845735_22130) or (CLOINNGCF_022845735_04535 and 
        CLOINNGCF_022845735_23395)
    - annotation: !!omap
      - biggr: FRUpts2pp
      - sbo: SBO:0000655
  - !!omap
    - id: FRUptspp
    - name: D-fructose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - f1p_c: 1.0
      - fru_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03705
    - annotation: !!omap
      - biggr: FRUptspp
      - sbo: SBO:0000655
  - !!omap
    - id: FRUtex
    - name: D-fructose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - fru_e: -1.0
      - fru_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: FRUtex
      - sbo: SBO:0000655
  - !!omap
    - id: FTHFLi
    - name: formate-tetrahydrofolate ligase
    - metabolites: !!omap
      - 10fthf_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - for_c: -1.0
      - pi_c: 1.0
      - thf_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01655 or CLOINNGCF_022845735_23530
    - annotation: !!omap
      - biggr: FTHFLi
      - rhea: RHEA:20221
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__FUCpts
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fc1p_c: 1.0
      - fcl__L_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__FUCpts
      - sbo: SBO:0000655
  - !!omap
    - id: FUM
    - name: fumarase
    - metabolites: !!omap
      - fum_c: -1.0
      - h2o_c: -1.0
      - mal__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08500
    - annotation: !!omap
      - biggr: FUM
      - rhea: RHEA:12460
      - sbo: SBO:0000176
  - !!omap
    - id: FUMt2_3pp
    - name: Fumarate transport via proton symport (3 H) (periplasm)
    - metabolites: !!omap
      - fum_c: 1.0
      - fum_p: -1.0
      - h_c: 3.0
      - h_p: -3.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21770
    - annotation: !!omap
      - biggr: FUMt2_3pp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__G1PACT
    - name: Glucosamine-1-phosphate N-acetyltransferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acgam1p_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - gam1p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00865 or CLOINNGCF_022845735_09080
        or CLOINNGCF_022845735_22460 or CLOINNGCF_022845735_22615
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__G1PACT
      - sbo: SBO:0000176
  - !!omap
    - id: G1PP
    - name: Glucose-1-phosphatase
    - metabolites: !!omap
      - g1p_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04510 or CLOINNGCF_022845735_07735
        or CLOINNGCF_022845735_16435
    - annotation: !!omap
      - biggr: G1PP
      - sbo: SBO:0000176
  - !!omap
    - id: G1SAT
    - name: glutamate-1-semialdehyde aminotransferase
    - metabolites: !!omap
      - 5aop_c: 1.0
      - glu1sa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11675
    - annotation: !!omap
      - biggr: G1SAT
      - rhea: RHEA:14265
      - sbo: SBO:0000176
  - !!omap
    - id: G3PD1ir
    - name: glycerol-3-phosphate dehydrogenase (NAD)
    - metabolites: !!omap
      - dhap_c: -1.0
      - glyc3p_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02820 or CLOINNGCF_022845735_12820
        or CLOINNGCF_022845735_21930
    - annotation: !!omap
      - biggr: G3PD1ir
      - rhea: RHEA:11092
      - sbo: SBO:0000176
  - !!omap
    - id: G3PD2
    - name: glycerol-3-phosphate dehydrogenase (NADP)
    - metabolites: !!omap
      - dhap_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12820 or CLOINNGCF_022845735_21930
    - annotation: !!omap
      - biggr: G3PD2
      - rhea: RHEA:11096
      - sbo: SBO:0000176
  - !!omap
    - id: G3PT
    - name: glycerol-3-phosphatase
    - metabolites: !!omap
      - glyc3p_c: -1.0
      - glyc_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10750
    - annotation: !!omap
      - biggr: G3PT
      - rhea: RHEA:66372
      - sbo: SBO:0000176
  - !!omap
    - id: G5SADs
    - name: L-glutamate 5-semialdehyde dehydratase (spontaneous)
    - metabolites: !!omap
      - glusemald_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - pyr5carb_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: G5SADs
      - rhea: RHEA:28234
      - sbo: SBO:0000176
  - !!omap
    - id: G5SD
    - name: glutamate-5-semialdehyde dehydrogenase
    - metabolites: !!omap
      - glu5p_c: -1.0
      - glusemald_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16490
    - annotation: !!omap
      - biggr: G5SD
      - rhea: RHEA:19541
      - sbo: SBO:0000176
  - !!omap
    - id: G6PBDH
    - name: beta-D-Glucose-6-phosphate_NADP+ 1-oxoreductase
    - metabolites: !!omap
      - 6pgl_c: 1.0
      - g6p_B_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17110
    - annotation: !!omap
      - biggr: G6PBDH
      - sbo: SBO:0000176
  - !!omap
    - id: G6PDA
    - name: glucosamine-6-phosphate deaminase
    - metabolites: !!omap
      - f6p_c: 1.0
      - gam6p_c: -1.0
      - h2o_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01310 or CLOINNGCF_022845735_07720
        or CLOINNGCF_022845735_21705
    - annotation: !!omap
      - biggr: G6PDA
      - rhea: RHEA:12172
      - sbo: SBO:0000176
  - !!omap
    - id: G6PDH2r
    - name: glucose 6-phosphate dehydrogenase
    - metabolites: !!omap
      - 6pgl_c: 1.0
      - g6p_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17110
    - annotation: !!omap
      - biggr: G6PDH2r
      - rhea: RHEA:15841
      - sbo: SBO:0000176
  - !!omap
    - id: G6PI
    - name: R_Glucose_6_phosphate_isomerase
    - metabolites: !!omap
      - g6p_B_c: 1.0
      - g6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09715
    - annotation: !!omap
      - biggr: G6PI
      - sbo: SBO:0000176
  - !!omap
    - id: G6PI3
    - name: R_Glucose_6_phosphate_isomerase
    - metabolites: !!omap
      - f6p_c: 1.0
      - g6p_B_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09715
    - annotation: !!omap
      - biggr: G6PI3
      - sbo: SBO:0000176
  - !!omap
    - id: G6PP
    - name: glucose-6-phosphate phosphatase
    - metabolites: !!omap
      - g6p_c: -1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04510 or CLOINNGCF_022845735_05880
        or CLOINNGCF_022845735_10750
    - annotation: !!omap
      - biggr: G6PP
      - rhea: RHEA:16689
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GAL6PI
    - name: Galactose-6-phosphate isomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dgal6p_c: -1.0
      - __iPKB_Clostridiaceae__tag6p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01445
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GAL6PI
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GALAM6PISO
    - name: N Acetyl D Galactosamine 6 phosphate isomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: 1.0
      - galam6p_c: -1.0
      - h2o_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03260
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GALAM6PISO
      - sbo: SBO:0000176
  - !!omap
    - id: GALAMPTSpp
    - name: D Galactosamine transport via PEPPyr  periplasm
    - metabolites: !!omap
      - galam6p_c: 1.0
      - galam_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03250 and 
        CLOINNGCF_022845735_03255 and CLOINNGCF_022845735_21700
    - annotation: !!omap
      - biggr: GALAMPTSpp
      - sbo: SBO:0000655
  - !!omap
    - id: GALAMtex
    - name: 
        R_D_Galactosamine_transport_transport_via_diffusion_extracellular_to_periplasm_
    - metabolites: !!omap
      - galam_e: -1.0
      - galam_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GALAMtex
      - sbo: SBO:0000655
  - !!omap
    - id: GALBDtex
    - name: beta D-galactose transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - gal_bD_e: -1.0
      - gal_bD_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GALBDtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GALK2
    - name: Galactokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__a_gal__D_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - gal1p_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19860
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GALK2
      - sbo: SBO:0000176
  - !!omap
    - id: GALKr
    - name: galactokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gal1p_c: 1.0
      - gal_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19860
    - annotation: !!omap
      - biggr: GALKr
      - rhea: RHEA:13553
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GALM
    - name: Aldose 1 epimerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__a_gal__D_c: 1.0
      - gal_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GALM
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GALM1
    - name: Aldose 1-epimerase (glucose)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glc_bD_c: -1.0
      - glc__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19855
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GALM1
      - sbo: SBO:0000176
  - !!omap
    - id: GALM2
    - name: Aldose 1-epimerase (galactose)
    - metabolites: !!omap
      - gal_bD_c: -1.0
      - gal_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07710 or CLOINNGCF_022845735_19855
    - annotation: !!omap
      - biggr: GALM2
      - rhea: RHEA:28675
      - sbo: SBO:0000176
  - !!omap
    - id: GALM2pp
    - name: aldose-1-epimerase
    - metabolites: !!omap
      - gal_bD_p: -1.0
      - gal_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19855
    - annotation: !!omap
      - biggr: GALM2pp
      - rhea: RHEA:28675
      - sbo: SBO:0000176
  - !!omap
    - id: DGGH
    - name: a-galactosidase (melibiose)
    - metabolites: !!omap
      - gal_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - melib_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18320
    - annotation: !!omap
      - biggr: DGGH
      - sbo: SBO:0000176
  - !!omap
    - id: GALTpts
    - name: Galactitol transport via PEP:Pyr PTS
    - metabolites: !!omap
      - galt1p_c: 1.0
      - galt_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_01605 and 
        CLOINNGCF_022845735_02045 and CLOINNGCF_022845735_05705) or 
        (CLOINNGCF_022845735_02030 and CLOINNGCF_022845735_19360 and 
        CLOINNGCF_022845735_23650) or (CLOINNGCF_022845735_05705 and 
        CLOINNGCF_022845735_05715 and CLOINNGCF_022845735_19360) or 
        (CLOINNGCF_022845735_05705 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_19360 and CLOINNGCF_022845735_21945 and 
        CLOINNGCF_022845735_23650)
    - annotation: !!omap
      - biggr: GALTpts
      - sbo: SBO:0000655
  - !!omap
    - id: GALUi
    - name: UTP-glucose-1-phosphate uridylyltransferase (irreversible)
    - metabolites: !!omap
      - g1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - udpg_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09080 or CLOINNGCF_022845735_22615
    - annotation: !!omap
      - biggr: GALUi
      - sbo: SBO:0000176
  - !!omap
    - id: GALabcpp
    - name: D-galactose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gal_c: 1.0
      - gal_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11935 or CLOINNGCF_022845735_11940
        or (CLOINNGCF_022845735_11935 and CLOINNGCF_022845735_11940) or 
        (CLOINNGCF_022845735_11940 and CLOINNGCF_022845735_16800)
    - annotation: !!omap
      - biggr: GALabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GALpts
    - name: Galactose transport via PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dgal6p_c: 1.0
      - gal_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01035 and 
        CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GALpts
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GALt2_3
    - name: ''
    - metabolites: !!omap
      - gal_bD_c: 1.0
      - gal_bD_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GALt2_3
      - sbo: SBO:0000655
  - !!omap
    - id: GAMpts
    - name: D-glucosamine transport via PEP:Pyr PTS
    - metabolites: !!omap
      - gam6p_c: 1.0
      - gam_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04190 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_19025 and 
        CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: GAMpts
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GAPD
    - name: Glyceraldehyde-3-phosphate dehydrogenase
    - metabolites: !!omap
      - 13dpg_c: 1.0
      - __iPKB_Clostridiaceae__g3p_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21635
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GAPD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GAPD:2
    - name: Glyceraldehyde-3-phosphate dehydrogenase
    - metabolites: !!omap
      - 13dpg_c: 1.0
      - __iPKB_Clostridiaceae__g3p_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21635
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GAPD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GAPDi_nadp
    - name: Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating)
    - metabolites: !!omap
      - 13dpg_c: -1.0
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21635
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GAPDi_nadp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GAPP
    - name: Glyceraldehyde-3-phosphate phosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: -1.0
      - glyald_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GAPP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GARFT
    - name: Phosphoribosylglycinamide formyltransferase
    - metabolites: !!omap
      - 10fthf_c: -1.0
      - __iPKB_Clostridiaceae__fgam_c: 1.0
      - gar_c: -1.0
      - h_c: 1.0
      - thf_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00625
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GARFT
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GART
    - name: GAR transformylase-T
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fgam_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - for_c: -1.0
      - gar_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13765
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GART
      - sbo: SBO:0000176
  - !!omap
    - id: GCALDD
    - name: Glycolaldehyde dehydrogenase
    - metabolites: !!omap
      - gcald_c: -1.0
      - glyclt_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: GCALDD
      - rhea: RHEA:20001
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GCVHADPr
    - name: GcvH-L complex ADP ribosylation
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gcvHL_ADPr_c: 1.0
      - __iPKB_Clostridiaceae__gcvHL_nhLA_c: -1.0
      - nad_c: -1.0
      - ncam_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GCVHADPr
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GCVHRADPr
    - name: GcvH-L complex reverse ADP ribosylation
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gcvHL_ADPr_c: -1.0
      - __iPKB_Clostridiaceae__gcvHL_nhLA_c: 1.0
      - adprib_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00910
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GCVHRADPr
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GDPDPK
    - name: GDP diphosphokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ppgpp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - gdp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13375
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GDPDPK
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GDPDPKE
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pppgpp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - gtp_c: -1.0
      - h_c: -6.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13375
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GDPDPKE
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GDPTPDP
    - name: Guanosine 3'-diphosphate 5'-triphosphate 3'-diphosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gdptp_c: -1.0
      - gtp_c: 1.0
      - h2o_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GDPTPDP
      - sbo: SBO:0000176
  - !!omap
    - id: GF6PTA
    - name: glutamine-fructose-6-phosphate transaminase
    - metabolites: !!omap
      - f6p_c: -1.0
      - gam6p_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03540 or CLOINNGCF_022845735_04350
        or CLOINNGCF_022845735_20475
    - annotation: !!omap
      - biggr: GF6PTA
      - sbo: SBO:0000176
  - !!omap
    - id: GHMT2r
    - name: glycine hydroxymethyltransferase, reversible
    - metabolites: !!omap
      - gly_c: 1.0
      - h2o_c: 1.0
      - mlthf_c: 1.0
      - ser__L_c: -1.0
      - thf_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01465
    - annotation: !!omap
      - biggr: GHMT2r
      - rhea: RHEA:15481
      - sbo: SBO:0000176
  - !!omap
    - id: GK1
    - name: guanylate kinase (GMP:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gdp_c: 1.0
      - gmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10385
    - annotation: !!omap
      - biggr: GK1
      - rhea: RHEA:20780
      - sbo: SBO:0000176
  - !!omap
    - id: GK2
    - name: R_guanylate_kinase__GMPdATP_
    - metabolites: !!omap
      - dadp_c: 1.0
      - datp_c: -1.0
      - gdp_c: 1.0
      - gmp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10385
    - annotation: !!omap
      - biggr: GK2
      - sbo: SBO:0000176
  - !!omap
    - id: GLDBRAN2
    - name: 1,4-alpha-glucan branching enzyme (glycogen -> bglycogen)
    - metabolites: !!omap
      - bglycogen_c: 1.0
      - glycogen_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21935
    - annotation: !!omap
      - biggr: GLDBRAN2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLCADpts
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g6p_A_c: 1.0
      - __iPKB_Clostridiaceae__glc_aD_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01970 or CLOINNGCF_022845735_22850
        or CLOINNGCF_022845735_22865 or CLOINNGCF_022845735_24830 or 
        (CLOINNGCF_022845735_22865 and CLOINNGCF_022845735_24820)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLCADpts
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLCAt2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glc_aD_c: 1.0
      - __iPKB_Clostridiaceae__glc_aD_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLCAt2
      - sbo: SBO:0000655
  - !!omap
    - id: GLCabc
    - name: D-glucose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glc__D_c: 1.0
      - glc__D_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18830 or 
        (CLOINNGCF_022845735_05615 and CLOINNGCF_022845735_18305 and 
        CLOINNGCF_022845735_18310)
    - annotation: !!omap
      - biggr: GLCabc
      - sbo: SBO:0000655
  - !!omap
    - id: GLCabcpp
    - name: D-glucose transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glc__D_c: 1.0
      - glc__D_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09070 or CLOINNGCF_022845735_11935
        or (CLOINNGCF_022845735_11935 and CLOINNGCF_022845735_11940) or 
        (CLOINNGCF_022845735_11940 and CLOINNGCF_022845735_16800)
    - annotation: !!omap
      - biggr: GLCabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GLCpts
    - name: D-glucose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - g6p_c: 1.0
      - glc__D_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04190 or CLOINNGCF_022845735_10945
        or CLOINNGCF_022845735_14670 or CLOINNGCF_022845735_19035 or 
        (CLOINNGCF_022845735_22865 and CLOINNGCF_022845735_24820) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14740 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_14745 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14750 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945 and CLOINNGCF_022845735_23940) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14730 and 
        CLOINNGCF_022845735_21945 and CLOINNGCF_022845735_23940)
    - annotation: !!omap
      - biggr: GLCpts
      - sbo: SBO:0000655
  - !!omap
    - id: GLCptspp
    - name: D-glucose transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - g6p_c: 1.0
      - glc__D_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19025 or 
        (CLOINNGCF_022845735_01280 and CLOINNGCF_022845735_22130) or 
        (CLOINNGCF_022845735_04535 and CLOINNGCF_022845735_22130) or 
        (CLOINNGCF_022845735_04535 and CLOINNGCF_022845735_23395)
    - annotation: !!omap
      - biggr: GLCptspp
      - sbo: SBO:0000655
  - !!omap
    - id: GLDBRAN2:2
    - name: 1,4-alpha-glucan branching enzyme (glycogen -> bglycogen)
    - metabolites: !!omap
      - bglycogen_c: -1.0
      - glycogen_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GLDBRAN2
      - sbo: SBO:0000176
  - !!omap
    - id: GLGC
    - name: glucose-1-phosphate adenylyltransferase
    - metabolites: !!omap
      - adpglc_c: 1.0
      - atp_c: -1.0
      - g1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03220 or CLOINNGCF_022845735_03225
        or CLOINNGCF_022845735_09080 or (CLOINNGCF_022845735_03220 and 
        CLOINNGCF_022845735_03225)
    - annotation: !!omap
      - biggr: GLGC
      - sbo: SBO:0000176
  - !!omap
    - id: GLNS
    - name: glutamine synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: 1.0
      - glu__L_c: -1.0
      - h_c: 1.0
      - nh4_c:1: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11705 or CLOINNGCF_022845735_12730
    - annotation: !!omap
      - biggr: GLNS
      - rhea: RHEA:16169
      - sbo: SBO:0000176
  - !!omap
    - id: GLNS:2
    - name: glutamine synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: 1.0
      - glu__L_c: -1.0
      - nh4_c:0: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11730
    - annotation: !!omap
      - biggr: GLNS:2
      - rhea: RHEA:16169
      - sbo: SBO:0000176
  - !!omap
    - id: GLNabc
    - name: L-glutamine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: 1.0
      - gln__L_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10885 or CLOINNGCF_022845735_15440
        or CLOINNGCF_022845735_21125 or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: GLNabc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLTPD
    - name: Galactitol-1-phosphate dehydrogenase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: 1.0
      - galt1p_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03345 or CLOINNGCF_022845735_23490
        or CLOINNGCF_022845735_24735
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLTPD
      - sbo: SBO:0000176
  - !!omap
    - id: GLU5K
    - name: glutamate 5-kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glu5p_c: 1.0
      - glu__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16485
    - annotation: !!omap
      - biggr: GLU5K
      - rhea: RHEA:14877
      - sbo: SBO:0000176
  - !!omap
    - id: GLUABUTt7
    - name: _4-aminobutyrate/glutamate antiport
    - metabolites: !!omap
      - 4abut_c: -1.0
      - 4abut_e: 1.0
      - glu__L_c: 1.0
      - glu__L_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01380
    - annotation: !!omap
      - biggr: GLUABUTt7
      - sbo: SBO:0000655
  - !!omap
    - id: GLUDy_1
    - name: glutamate dehydrogenase (NADP)
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - nh4_c:1: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10395 or CLOINNGCF_022845735_11725
    - annotation: !!omap
      - biggr: GLUDy_1
      - rhea: RHEA:11612
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLUKA_1
    - name: Glucokinase/hexokinase (glc-A)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g6p_A_c: 1.0
      - __iPKB_Clostridiaceae__glc_aD_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05965
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLUKA_1
      - sbo: SBO:0000176
  - !!omap
    - id: GLUN_1
    - name: glutaminase
    - metabolites: !!omap
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12535 or CLOINNGCF_022845735_13765
    - annotation: !!omap
      - biggr: GLUN_1
      - rhea: RHEA:15889
      - sbo: SBO:0000176
  - !!omap
    - id: GLUPRT
    - name: glutamine phosphoribosyldiphosphate amidotransferase
    - metabolites: !!omap
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - ppi_c: 1.0
      - pram_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07460 or CLOINNGCF_022845735_11750
    - annotation: !!omap
      - biggr: GLUPRT
      - rhea: RHEA:14905
      - sbo: SBO:0000176
  - !!omap
    - id: GLUR
    - name: glutamate racemase
    - metabolites: !!omap
      - glu__D_c: -1.0
      - glu__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19070
    - annotation: !!omap
      - biggr: GLUR
      - rhea: RHEA:12813
      - sbo: SBO:0000176
  - !!omap
    - id: GLUSx
    - name: glutamate synthase (NADH2)
    - metabolites: !!omap
      - akg_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 2.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12535 or 
        (CLOINNGCF_022845735_11710 and CLOINNGCF_022845735_11715 and 
        CLOINNGCF_022845735_11720 and CLOINNGCF_022845735_11910)
    - annotation: !!omap
      - biggr: GLUSx
      - rhea: RHEA:13753
      - sbo: SBO:0000176
  - !!omap
    - id: GLUSy
    - name: glutamate synthase (NADPH)
    - metabolites: !!omap
      - akg_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 2.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11715 or CLOINNGCF_022845735_12535
        or (CLOINNGCF_022845735_11715 and CLOINNGCF_022845735_21395)
    - annotation: !!omap
      - biggr: GLUSy
      - rhea: RHEA:15501
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLUTRR
    - name: Glutamyl-tRNA reductase
    - metabolites: !!omap
      - glu1sa_c: 1.0
      - glutrna_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - trnaglu_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11655
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLUTRR
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLUTRS
    - name: Glutamyl-tRNA synthetase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - glu__L_c: -1.0
      - glutrna_c: 1.0
      - ppi_c: 1.0
      - trnaglu_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19015
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLUTRS
      - sbo: SBO:0000176
  - !!omap
    - id: GLUabc
    - name: L-glutamate transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glu__L_c: 1.0
      - glu__L_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_14705 and 
        CLOINNGCF_022845735_15445)
    - annotation: !!omap
      - biggr: GLUabc
      - sbo: SBO:0000655
  - !!omap
    - id: GLUt4
    - name: Na+/glutamate symport
    - metabolites: !!omap
      - glu__L_c: 1.0
      - glu__L_e: -1.0
      - na1_c: 1.0
      - na1_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04235
    - annotation: !!omap
      - biggr: GLUt4
      - sbo: SBO:0000655
  - !!omap
    - id: GLXCL
    - name: glyoxalate carboligase
    - metabolites: !!omap
      - 2h3opp_c: 1.0
      - co2_c: 1.0
      - glx_c: -2.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GLXCL
      - rhea: RHEA:10136
      - sbo: SBO:0000176
  - !!omap
    - id: GLYALDDr
    - name: D-Glyceraldehyde dehydrogenase
    - metabolites: !!omap
      - glyald_c: -1.0
      - glyc__R_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: GLYALDDr
      - rhea: RHEA:30783
      - sbo: SBO:0000176
  - !!omap
    - id: GLYBabc
    - name: Glycine betaine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyb_c: 1.0
      - glyb_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07625 or CLOINNGCF_022845735_10760
        or CLOINNGCF_022845735_24265 or (CLOINNGCF_022845735_13670 and 
        CLOINNGCF_022845735_13675 and CLOINNGCF_022845735_24265)
    - annotation: !!omap
      - biggr: GLYBabc
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCDx
    - name: Glycerol dehydrogenase
    - metabolites: !!omap
      - dha_c: 1.0
      - glyc_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_20430
    - annotation: !!omap
      - biggr: GLYCDx
      - rhea: RHEA:13769
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCK
    - name: glycerate kinase
    - metabolites: !!omap
      - 3pg_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc__R_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06975 or CLOINNGCF_022845735_24125
    - annotation: !!omap
      - biggr: GLYCK
      - rhea: RHEA:23516
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCK2
    - name: glycerate kinase
    - metabolites: !!omap
      - 2pg_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc__R_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06975
    - annotation: !!omap
      - biggr: GLYCK2
      - rhea: RHEA:27377
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCK:2
    - name: glycerate kinase
    - metabolites: !!omap
      - 3pg_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc__R_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06975
    - annotation: !!omap
      - biggr: GLYCK
      - rhea: RHEA:23516
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCLTDx
    - name: Glycolate dehydrogenase (NAD)
    - metabolites: !!omap
      - glx_c: -1.0
      - glyclt_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03375
    - annotation: !!omap
      - biggr: GLYCLTDx
      - rhea: RHEA:18229
      - sbo: SBO:0000176
  - !!omap
    - id: GLYCLTt
    - name: Glycolate permease
    - metabolites: !!omap
      - glyclt_c: 1.0
      - glyclt_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GLYCLTt
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYCYSAP
    - name: Gly-Cys aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_cys_c: -1.0
      - cys__L_c: 1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYCYSAP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYCYSabc
    - name: Gly-Cys ABC transporters
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_cys_c: 1.0
      - __iPKB_Clostridiaceae__gly_cys_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYCYSabc
      - sbo: SBO:0000655
  - !!omap
    - id: GLYCtpp
    - name: glycerol transport via channel (periplasm)
    - metabolites: !!omap
      - glyc_c: -1.0
      - glyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: GLYCtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYGLNtr
    - name: Dipeptide transport via ABC system gly-gln
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_gln_c: 1.0
      - __iPKB_Clostridiaceae__gly_gln_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYGLNtr
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYGLYGLNtr
    - name: Tripeptide transport
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glyglygln_c: 1.0
      - __iPKB_Clostridiaceae__glyglygln_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYGLYGLNtr
      - sbo: SBO:0000655
  - !!omap
    - id: GLYK
    - name: glycerol kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc3p_c: 1.0
      - glyc_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11190
    - annotation: !!omap
      - biggr: GLYK
      - rhea: RHEA:21644
      - sbo: SBO:0000176
  - !!omap
    - id: GLYK:2
    - name: glycerol kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glyc3p_c: 1.0
      - glyc_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11190
    - annotation: !!omap
      - biggr: GLYK
      - rhea: RHEA:21644
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYLEUAP
    - name: Gly-Leu aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_leu_c: -1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - leu__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYLEUAP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYLEUtr
    - name: Gly-Leu ABC transporters
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_leu_c: 1.0
      - __iPKB_Clostridiaceae__gly_leu_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYLEUtr
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYMETtr
    - name: Dipeptide transport via ABC system gly-met
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_met_c: 1.0
      - __iPKB_Clostridiaceae__gly_met_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYMETtr
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYPHEAP
    - name: Gly-Phe aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_phe_c: -1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - phe__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYPHEAP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYPHEtr
    - name: Gly-Phe ABC transporters
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_phe_c: 1.0
      - __iPKB_Clostridiaceae__gly_phe_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYPHEtr
      - sbo: SBO:0000655
  - !!omap
    - id: GLYTA
    - name: glycine transaminase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - glx_c: -1.0
      - gly_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09050
    - annotation: !!omap
      - biggr: GLYTA
      - rhea: RHEA:14089
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYTYRAP
    - name: Gly-Try aminopeptidase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_tyr_c: -1.0
      - gly_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - tyr__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15380
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYTYRAP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GLYTYRabc
    - name: Gly-Try ABC transporters
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gly_tyr_c: 1.0
      - __iPKB_Clostridiaceae__gly_tyr_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GLYTYRabc
      - sbo: SBO:0000655
  - !!omap
    - id: GLYabc
    - name: glycine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gly_c: 1.0
      - gly_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: GLYabc
      - sbo: SBO:0000655
  - !!omap
    - id: GLYt2r
    - name: glycine reversible transport via proton symport
    - metabolites: !!omap
      - gly_c: 1.0
      - gly_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06970
    - annotation: !!omap
      - biggr: GLYt2r
      - sbo: SBO:0000655
  - !!omap
    - id: GMPS2
    - name: GMP synthase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - gmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - ppi_c: 1.0
      - xmp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07065 or CLOINNGCF_022845735_11010
    - annotation: !!omap
      - biggr: GMPS2
      - rhea: RHEA:11680
      - sbo: SBO:0000176
  - !!omap
    - id: GND
    - name: phosphogluconate dehydrogenase
    - metabolites: !!omap
      - 6pgc_c: -1.0
      - co2_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ru5p__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_17115 or CLOINNGCF_022845735_22800
    - annotation: !!omap
      - biggr: GND
      - rhea: RHEA:10116
      - sbo: SBO:0000176
  - !!omap
    - id: GNP
    - name: Phosphogluconate phosphatase
    - metabolites: !!omap
      - 6pgc_c: -1.0
      - glcn_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430
    - annotation: !!omap
      - biggr: GNP
      - sbo: SBO:0000176
  - !!omap
    - id: GRTT
    - name: geranyltranstransferase
    - metabolites: !!omap
      - frdp_c: 1.0
      - grdp_c: -1.0
      - ipdp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12670
    - annotation: !!omap
      - biggr: GRTT
      - rhea: RHEA:19361
      - sbo: SBO:0000176
  - !!omap
    - id: GTHRDH_syn
    - name: glutathione hydralase (periplasmic)
    - metabolites: !!omap
      - cgly_c: 1.0
      - glu__L_c: 1.0
      - gthrd_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23690
    - annotation: !!omap
      - biggr: GTHRDH_syn
      - rhea: RHEA:28807
      - sbo: SBO:0000176
  - !!omap
    - id: GTHRDabc2pp
    - name: glutathione export via ABC system (cytoplasm to periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gthrd_c: -1.0
      - gthrd_p: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01330 or CLOINNGCF_022845735_10135
    - annotation: !!omap
      - biggr: GTHRDabc2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GTHRDabcpp
    - name: Reduced glutathione via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gthrd_c: 1.0
      - gthrd_p: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205
    - annotation: !!omap
      - biggr: GTHRDabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: GTHRDt2_1
    - name: Glutathione transport
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gthrd_c: 1.0
      - gthrd_e: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06205 or CLOINNGCF_022845735_10885
        or CLOINNGCF_022845735_14705
    - annotation: !!omap
      - biggr: GTHRDt2_1
      - sbo: SBO:0000655
  - !!omap
    - id: GTPCI
    - name: GTP cyclohydrolase I
    - metabolites: !!omap
      - ahdt_c: 1.0
      - for_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GTPCI
      - rhea: RHEA:17473
      - sbo: SBO:0000176
  - !!omap
    - id: GTPCII2
    - name: GTP cyclohydrolase II (25drapp)
    - metabolites: !!omap
      - 25drapp_c:-2: 1.0
      - for_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -3.0
      - h_c: 2.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05220
    - annotation: !!omap
      - biggr: GTPCII2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GTPCII2
    - name: GTP cyclohydrolase II (25drapp)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__25drapp_DUP1_c: 1.0
      - for_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -3.0
      - h_c: 2.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05220
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GTPCII2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GTPDPK
    - name: GTP diphosphokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gdptp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - gtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12635 or CLOINNGCF_022845735_13375
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GTPDPK
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GTPDPK:2
    - name: GTP diphosphokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__gdptp_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - gtp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13375
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GTPDPK
      - sbo: SBO:0000176
  - !!omap
    - id: GTPHs
    - name: GTP amine hydrolysis (spontaneous)
    - metabolites: !!omap
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
      - xtp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: GTPHs
      - sbo: SBO:0000176
  - !!omap
    - id: GUAC
    - name: guanylate cyclase
    - metabolites: !!omap
      - 35cgmp_c: 1.0
      - gtp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03485 or CLOINNGCF_022845735_09630
        or CLOINNGCF_022845735_11245 or CLOINNGCF_022845735_15265 or 
        CLOINNGCF_022845735_15855 or CLOINNGCF_022845735_20380
    - annotation: !!omap
      - biggr: GUAC
      - rhea: RHEA:13665
      - sbo: SBO:0000176
  - !!omap
    - id: GUAD_1
    - name: guanine deaminase
    - metabolites: !!omap
      - gua_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
      - xan_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21140
    - annotation: !!omap
      - biggr: GUAD_1
      - sbo: SBO:0000176
  - !!omap
    - id: GUAPRT
    - name: guanine phosphoribosyltransferase
    - metabolites: !!omap
      - gmp_c: 1.0
      - gua_c: -1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23165
    - annotation: !!omap
      - biggr: GUAPRT
      - rhea: RHEA:25424
      - sbo: SBO:0000176
  - !!omap
    - id: GUAt
    - name: Guanine transport
    - metabolites: !!omap
      - gua_c: 1.0
      - gua_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16480
    - annotation: !!omap
      - biggr: GUAt
      - sbo: SBO:0000655
  - !!omap
    - id: GUAt2pp
    - name: guanine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - gua_c: 1.0
      - gua_p: -1.0
      - h_c: 1.0
      - h_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21510
    - annotation: !!omap
      - biggr: GUAt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: GUAt2r
    - name: guanine transport in via proton symport
    - metabolites: !!omap
      - gua_c: 1.0
      - gua_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07060
    - annotation: !!omap
      - biggr: GUAt2r
      - sbo: SBO:0000655
  - !!omap
    - id: GUAtex
    - name: Guanine transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - gua_e: -1.0
      - gua_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: GUAtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__GalMr
    - name: Aldose 1-epimerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glc_aD_c: -1.0
      - __iPKB_Clostridiaceae__glc_bD_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19855
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GalMr
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__GalMr_2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__glc_aD_c: -1.0
      - glc__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07710
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__GalMr_2
      - sbo: SBO:0000176
  - !!omap
    - id: H2CO3D2
    - name: carboxylic acid dissociation
    - metabolites: !!omap
      - h2co3_c:-1: -1.0
      - h2co3_c:0: 1.0
      - h_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2CO3D2:2
      - sbo: SBO:0000176
  - !!omap
    - id: H2Ot
    - name: H2O transport via diffusion
    - metabolites: !!omap
      - h2o_c: 1.0
      - h2o_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2Ot
      - sbo: SBO:0000655
  - !!omap
    - id: H2Otex
    - name: H2O transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - h2o_e: -1.0
      - h2o_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2Otex
      - sbo: SBO:0000655
  - !!omap
    - id: H2Otpp
    - name: H2O transport via diffusion (periplasm)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h2o_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2Otpp
      - sbo: SBO:0000655
  - !!omap
    - id: H2SO
    - name: Hydrogen sulfide oxidation
    - metabolites: !!omap
      - h2s_c: -1.0
      - h_c: 2.0
      - o2_c: -2.0
      - so4_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2SO:2
      - sbo: SBO:0000176
  - !!omap
    - id: H2St1
    - name: h2s transport via diffusion
    - metabolites: !!omap
      - h2s_c: -1.0
      - h2s_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2St1:2
      - sbo: SBO:0000655
  - !!omap
    - id: H2td
    - name: H2td
    - metabolites: !!omap
      - h2_c: -1.0
      - h2_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: H2td
      - sbo: SBO:0000655
  - !!omap
    - id: H2tpp
    - name: hydrogen transport diffusion (periplasm)
    - metabolites: !!omap
      - h2_c: 1.0
      - h2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: H2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: HACD1i
    - name: 3-hydroxyacyl-CoA dehydrogenase (acetoacetyl-CoA)
    - metabolites: !!omap
      - 3hbcoa_c: -1.0
      - aacoa_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13860
    - annotation: !!omap
      - biggr: HACD1i
      - rhea: RHEA:30799
      - sbo: SBO:0000176
  - !!omap
    - id: HACD7
    - name: 3-hydroxyacyl-CoA dehydrogenase (3-oxohexadecanoyl-CoA)
    - metabolites: !!omap
      - 3hhdcoa_c: 1.0
      - 3ohdcoa_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: HACD7
      - rhea: RHEA:31159
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__HACD9
    - name: 3 hydroxyacyl CoA dehydrogenase  2 Methylacetoacetyl CoA
    - metabolites: !!omap
      - 3hmbcoa_c: -1.0
      - __iPKB_Clostridiaceae__2maacoa_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16825
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__HACD9
      - sbo: SBO:0000176
  - !!omap
    - id: HAMR
    - name: Hydroxylamine reductase
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - ham_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - nh4_c:1: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01925
    - annotation: !!omap
      - biggr: HAMR
      - rhea: RHEA:20581
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__HAMt
    - name: ''
    - metabolites: !!omap
      - ham_c: 1.0
      - ham_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__HAMt
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__HBCHLR
    - name: (3R)-3-Hydroxybutanoyl-CoA hydro-lyase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__3hbcoa__R_c: -1.0
      - b2coa_c: 1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13855
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__HBCHLR
      - sbo: SBO:0000176
  - !!omap
    - id: HBCO_nadp
    - name: 3-Hydroxybutanoyl-CoA:NADP+ oxidoreductase
    - metabolites: !!omap
      - 3hbcoa_c: 1.0
      - aacoa_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13860
    - annotation: !!omap
      - biggr: HBCO_nadp
      - rhea: RHEA:16197
      - sbo: SBO:0000176
  - !!omap
    - id: H2CO3D
    - name: HCO3 equilibration reaction
    - metabolites: !!omap
      - co2_c: -1.0
      - h2co3_c:-1: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14685 or spontaneous
    - annotation: !!omap
      - biggr: H2CO3D
      - rhea: RHEA:10748
      - sbo: SBO:0000176
  - !!omap
    - id: HCYSMT
    - name: homocysteine S-methyltransferase
    - metabolites: !!omap
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: 1.0
      - hcys__L_c: -1.0
      - met__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15770 or CLOINNGCF_022845735_19415
    - annotation: !!omap
      - biggr: HCYSMT
      - sbo: SBO:0000176
  - !!omap
    - id: HETZK_1
    - name: hydroxyethylthiazole kinase
    - metabolites: !!omap
      - 4mhetz_c: -1.0
      - 4mpetz_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00675 or CLOINNGCF_022845735_24985
    - annotation: !!omap
      - biggr: HETZK_1
      - rhea: RHEA:24212
      - sbo: SBO:0000176
  - !!omap
    - id: HEX1
    - name: hexokinase (D-glucose:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - g6p_c: 1.0
      - glc__D_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05965 or CLOINNGCF_022845735_10685
    - annotation: !!omap
      - biggr: HEX1
      - rhea: RHEA:17825
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__HEX4
    - name: Hexokinase (D-mannose:ATP)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man6p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - man_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05965
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__HEX4
      - sbo: SBO:0000176
  - !!omap
    - id: HEX7
    - name: hexokinase (D-fructose:ATP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - f6p_c: 1.0
      - fru_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19055
    - annotation: !!omap
      - biggr: HEX7
      - sbo: SBO:0000176
  - !!omap
    - id: HISTD
    - name: histidinol dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 3.0
      - his__L_c: 1.0
      - histd_c: -1.0
      - nad_c: -2.0
      - nadh_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06890
    - annotation: !!omap
      - biggr: HISTD
      - rhea: RHEA:20641
      - sbo: SBO:0000176
  - !!omap
    - id: HISTP_1
    - name: histidinol-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - hisp_c: -1.0
      - histd_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06900 or CLOINNGCF_022845735_09110
        or CLOINNGCF_022845735_15435 or CLOINNGCF_022845735_21255
    - annotation: !!omap
      - biggr: HISTP_1
      - rhea: RHEA:14465
      - sbo: SBO:0000176
  - !!omap
    - id: HISabc
    - name: L-histidine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - his__L_c: 1.0
      - his__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: HISabc
      - sbo: SBO:0000655
  - !!omap
    - id: HKtpp
    - name: H+/K+ gastric/non-gastric P-ATPase and ABC ATPase (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_p: 1.0
      - k_c: 1.0
      - k_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10005 and 
        CLOINNGCF_022845735_10010
    - annotation: !!omap
      - biggr: HKtpp
      - sbo: SBO:0000655
  - !!omap
    - id: HMBS
    - name: hydroxymethylbilane synthase
    - metabolites: !!omap
      - h2o_c: -1.0
      - hmbil_c: 1.0
      - nh4_c:1: 4.0
      - ppbng_c: -4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: HMBS
      - rhea: RHEA:13185
      - sbo: SBO:0000176
  - !!omap
    - id: HMPK1
    - name: hydroxymethylpyrimidine kinase (ATP)
    - metabolites: !!omap
      - 4ahmmp_c: -1.0
      - 4ampm_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04515
    - annotation: !!omap
      - biggr: HMPK1
      - rhea: RHEA:23096
      - sbo: SBO:0000176
  - !!omap
    - id: HMR_9638
    - name: HMR 9638
    - metabolites: !!omap
      - 4abutn_c: -1.0
      - 4abutn_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: HMR_9638
      - sbo: SBO:0000655
  - !!omap
    - id: HOXPRx
    - name: tartronate semialdehyde reductase
    - metabolites: !!omap
      - 2h3opp_c: 1.0
      - glyc__R_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15215
    - annotation: !!omap
      - biggr: HOXPRx
      - rhea: RHEA:18845
      - sbo: SBO:0000176
  - !!omap
    - id: HPROb
    - name: R_L_hydroxyproline_reductase__NADP_
    - metabolites: !!omap
      - 1p3h5c_c: -1.0
      - 4hpro_LT_c: 1.0
      - h_c: -2.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19200
    - annotation: !!omap
      - biggr: HPROb
      - sbo: SBO:0000176
  - !!omap
    - id: HPROa
    - name: R_L_hydroxyproline_reductase__NAD_
    - metabolites: !!omap
      - 1p3h5c_c: 1.0
      - 4hpro_LT_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19200
    - annotation: !!omap
      - biggr: HPROa
      - sbo: SBO:0000176
  - !!omap
    - id: HPYRRx
    - name: Hydroxypyruvate reductase (NADH)
    - metabolites: !!omap
      - glyc__R_c: 1.0
      - h_c: -1.0
      - hpyr_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03375 or CLOINNGCF_022845735_03385
    - annotation: !!omap
      - biggr: HPYRRx
      - rhea: RHEA:17905
      - sbo: SBO:0000176
  - !!omap
    - id: HQNt6
    - name: R_hydroquinone_transport_inout_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - hqn_c: 1.0
      - hqn_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: HQNt6
      - sbo: SBO:0000655
  - !!omap
    - id: HSDxi
    - name: R_homoserine_dehydrogenase__NADH___irreversible
    - metabolites: !!omap
      - aspsa_c: -1.0
      - h_c: -1.0
      - hom__L_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19770
    - annotation: !!omap
      - biggr: HSDxi
      - rhea: RHEA:15757
      - sbo: SBO:0000176
  - !!omap
    - id: HSDy
    - name: homoserine dehydrogenase (NADPH)
    - metabolites: !!omap
      - aspsa_c: 1.0
      - h_c: 1.0
      - hom__L_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19770
    - annotation: !!omap
      - biggr: HSDy
      - rhea: RHEA:15761
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__HSERTA
    - name: Homoserine O trans acetylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__achms_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - hom__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13905 or CLOINNGCF_022845735_14800
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__HSERTA
      - sbo: SBO:0000176
  - !!omap
    - id: HSK
    - name: homoserine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - hom__L_c: -1.0
      - phom_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19760
    - annotation: !!omap
      - biggr: HSK
      - rhea: RHEA:13985
      - sbo: SBO:0000176
  - !!omap
    - id: HSST
    - name: homoserine O-succinyltransferase
    - metabolites: !!omap
      - coa_c: 1.0
      - hom__L_c: -1.0
      - succoa_c: -1.0
      - suchms_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13905
    - annotation: !!omap
      - biggr: HSST
      - rhea: RHEA:22008
      - sbo: SBO:0000176
  - !!omap
    - id: HSTPT
    - name: histidinol-phosphate transaminase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - hisp_c: 1.0
      - imacp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06895
    - annotation: !!omap
      - biggr: HSTPT
      - rhea: RHEA:23744
      - sbo: SBO:0000176
  - !!omap
    - id: HSTPT:2
    - name: histidinol-phosphate transaminase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - hisp_c: 1.0
      - imacp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06905
    - annotation: !!omap
      - biggr: HSTPT
      - rhea: RHEA:23744
      - sbo: SBO:0000176
  - !!omap
    - id: HXAND
    - name: hypoxanthine dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - hxan_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - xan_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_02535 and 
        CLOINNGCF_022845735_02540) or (CLOINNGCF_022845735_02535 and 
        CLOINNGCF_022845735_02540 and CLOINNGCF_022845735_02545)
    - annotation: !!omap
      - biggr: HXAND
      - sbo: SBO:0000176
  - !!omap
    - id: HXANt2pp
    - name: hypoxanthine transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - hxan_c: 1.0
      - hxan_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21510
    - annotation: !!omap
      - biggr: HXANt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: HXANt2r
    - name: R_hypoxanthine_reversible_transport_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - hxan_c: 1.0
      - hxan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07060
    - annotation: !!omap
      - biggr: HXANt2r
      - sbo: SBO:0000655
  - !!omap
    - id: HXPRT
    - name: hypoxanthine phosphoribosyltransferase (Hypoxanthine)
    - metabolites: !!omap
      - hxan_c: -1.0
      - imp_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23165
    - annotation: !!omap
      - biggr: HXPRT
      - rhea: RHEA:17973
      - sbo: SBO:0000176
  - !!omap
    - id: HYXNtpp
    - name: Hypoxanthine transport (periplasm)
    - metabolites: !!omap
      - hxan_c: 1.0
      - hxan_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: HYXNtpp
      - sbo: SBO:0000655
  - !!omap
    - id: ICDHx
    - name: Isocitrate dehydrogenase (NAD)
    - metabolites: !!omap
      - akg_c: 1.0
      - co2_c: 1.0
      - icit_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16515
    - annotation: !!omap
      - biggr: ICDHx
      - sbo: SBO:0000176
  - !!omap
    - id: ICDHyr
    - name: isocitrate dehydrogenase (NADP)
    - metabolites: !!omap
      - akg_c: 1.0
      - co2_c: 1.0
      - icit_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16515
    - annotation: !!omap
      - biggr: ICDHyr
      - sbo: SBO:0000176
  - !!omap
    - id: ICHORS
    - name: isochorismate synthase
    - metabolites: !!omap
      - chor_c: -1.0
      - ichor_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: ICHORS
      - rhea: RHEA:18985
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ICHORT
    - name: Isochorismatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__23ddhb_c: 1.0
      - h2o_c: -1.0
      - ichor_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07645 or CLOINNGCF_022845735_09895
        or CLOINNGCF_022845735_10415
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ICHORT
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ID6P
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: 1.0
      - f6p_c: -1.0
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ID6P
      - sbo: SBO:0000176
  - !!omap
    - id: IG3PS
    - name: Imidazole-glycerol-3-phosphate synthase
    - metabolites: !!omap
      - aicar_c: 1.0
      - eig3p_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h_c: 1.0
      - prlp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06905 or CLOINNGCF_022845735_06915
        or (CLOINNGCF_022845735_06905 and CLOINNGCF_022845735_06915)
    - annotation: !!omap
      - biggr: IG3PS
      - rhea: RHEA:24793
      - sbo: SBO:0000176
  - !!omap
    - id: IG3PS:2
    - name: Imidazole-glycerol-3-phosphate synthase
    - metabolites: !!omap
      - aicar_c: 1.0
      - eig3p_c: 1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h_c: 1.0
      - prlp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06915
    - annotation: !!omap
      - biggr: IG3PS
      - rhea: RHEA:24793
      - sbo: SBO:0000176
  - !!omap
    - id: IGPDH
    - name: imidazoleglycerol-phosphate dehydratase
    - metabolites: !!omap
      - eig3p_c: -1.0
      - h2o_c: 1.0
      - imacp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06900
    - annotation: !!omap
      - biggr: IGPDH
      - rhea: RHEA:11040
      - sbo: SBO:0000176
  - !!omap
    - id: IGPDH:2
    - name: imidazoleglycerol-phosphate dehydratase
    - metabolites: !!omap
      - eig3p_c: -1.0
      - h2o_c: 1.0
      - imacp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06900
    - annotation: !!omap
      - biggr: IGPDH
      - rhea: RHEA:11040
      - sbo: SBO:0000176
  - !!omap
    - id: IGPS
    - name: indole-3-glycerol-phosphate synthase
    - metabolites: !!omap
      - 2cpr5p_c: -1.0
      - 3ig3p_c: 1.0
      - co2_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21170
    - annotation: !!omap
      - biggr: IGPS
      - rhea: RHEA:23476
      - sbo: SBO:0000176
  - !!omap
    - id: ILETA
    - name: isoleucine transaminase
    - metabolites: !!omap
      - 3mop_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - ile__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10230
    - annotation: !!omap
      - biggr: ILETA
      - rhea: RHEA:24801
      - sbo: SBO:0000176
  - !!omap
    - id: ILEabc
    - name: L-isoleucine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ile__L_c: 1.0
      - ile__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_03580 and 
        CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03590 and 
        CLOINNGCF_022845735_03595 and CLOINNGCF_022845735_03600)
    - annotation: !!omap
      - biggr: ILEabc
      - sbo: SBO:0000655
  - !!omap
    - id: ILEt2r
    - name: L-isoleucine reversible transport via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - ile__L_c: 1.0
      - ile__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03910 or CLOINNGCF_022845735_18815
        or (CLOINNGCF_022845735_18810 and CLOINNGCF_022845735_18815)
    - annotation: !!omap
      - biggr: ILEt2r
      - sbo: SBO:0000655
  - !!omap
    - id: IMPC
    - name: IMP cyclohydrolase
    - metabolites: !!omap
      - fprica_c: 1.0
      - h2o_c: -1.0
      - imp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00630
    - annotation: !!omap
      - biggr: IMPC
      - rhea: RHEA:18445
      - sbo: SBO:0000176
  - !!omap
    - id: IMPD
    - name: IMP dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - imp_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - xmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03465 or CLOINNGCF_022845735_10820
    - annotation: !!omap
      - biggr: IMPD
      - rhea: RHEA:11708
      - sbo: SBO:0000176
  - !!omap
    - id: INOSR
    - name: Ketoinositol reductase
    - metabolites: !!omap
      - 2ins_c: 1.0
      - h_c: 1.0
      - inost_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_05945
    - annotation: !!omap
      - biggr: INOSR:2
      - sbo: SBO:0000176
  - !!omap
    - id: INS2D
    - name: R_inositol_2_dehydrogenase
    - metabolites: !!omap
      - 2ins_c: 1.0
      - h_c: 1.0
      - inost_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05945
    - annotation: !!omap
      - biggr: INS2D:2
      - sbo: SBO:0000176
  - !!omap
    - id: INSCR
    - name: R_inositol_catabolic_reactions__lumped_
    - metabolites: !!omap
      - 2ins_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - dhap_c: 1.0
      - h_c: 2.0
      - msa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24740
    - annotation: !!omap
      - biggr: INSCR:2
      - sbo: SBO:0000176
  - !!omap
    - id: INSH
    - name: Inosine hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - hxan_c: 1.0
      - ins_c: -1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21765
    - annotation: !!omap
      - biggr: INSH
      - rhea: RHEA:16657
      - sbo: SBO:0000176
  - !!omap
    - id: INSTabc
    - name: Inositol transport in via ABC transport
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - inost_c: 1.0
      - inost_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18830
    - annotation: !!omap
      - biggr: INSTabc
      - sbo: SBO:0000655
  - !!omap
    - id: IPDDI
    - name: isopentenyl-diphosphate D-isomerase
    - metabolites: !!omap
      - dmpp_c: 1.0
      - ipdp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12935
    - annotation: !!omap
      - biggr: IPDDI
      - rhea: RHEA:23284
      - sbo: SBO:0000176
  - !!omap
    - id: IPDPS
    - name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp)
    - metabolites: !!omap
      - h2mb4p_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - ipdp_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12275 or CLOINNGCF_022845735_12930
    - annotation: !!omap
      - biggr: IPDPS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__IPDPUDCT
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__udcpdp_c: 1.0
      - ggdp_c: -1.0
      - h_c: -1.0
      - ipdp_c: -7.0
      - ppi_c: 7.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__IPDPUDCT
      - sbo: SBO:0000176
  - !!omap
    - id: IPMD
    - name: 3-isopropylmalate dehydrogenase
    - metabolites: !!omap
      - 3c2hmp_c: -1.0
      - 3c4mop_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15070 or CLOINNGCF_022845735_16515
    - annotation: !!omap
      - biggr: IPMD
      - rhea: RHEA:10892
      - sbo: SBO:0000176
  - !!omap
    - id: IPPMIa
    - name: 3-isopropylmalate dehydratase
    - metabolites: !!omap
      - 2ippm_c: 1.0
      - 3c2hmp_c: -1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15075 and 
        CLOINNGCF_022845735_15080
    - annotation: !!omap
      - biggr: IPPMIa
      - rhea: RHEA:10676
      - sbo: SBO:0000176
  - !!omap
    - id: IPPMIb
    - name: 2-isopropylmalate hydratase
    - metabolites: !!omap
      - 2ippm_c: -1.0
      - 3c3hmp_c: 1.0
      - h2o_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15075 and 
        CLOINNGCF_022845735_15080
    - annotation: !!omap
      - biggr: IPPMIb
      - rhea: RHEA:16293
      - sbo: SBO:0000176
  - !!omap
    - id: IPPS
    - name: 2-isopropylmalate synthase
    - metabolites: !!omap
      - 3c3hmp_c: 1.0
      - 3mob_c: -1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15085
    - annotation: !!omap
      - biggr: IPPS
      - rhea: RHEA:21524
      - sbo: SBO:0000176
  - !!omap
    - id: ISTNTabc
    - name: R_Isethionate_transport_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - isetac_c: 1.0
      - isetac_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14540
    - annotation: !!omap
      - biggr: ISTNTabc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__IT6PT
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: -1.0
      - __iPKB_Clostridiaceae__tagdp__D_c: 1.0
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19130
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__IT6PT
      - sbo: SBO:0000176
  - !!omap
    - id: ITCY
    - name: R_cytidine_kinase__ITP_
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515 or CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: ITCY
      - sbo: SBO:0000176
  - !!omap
    - id: KARA1
    - name: ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate)
    - metabolites: !!omap
      - 23dhmb_c: -1.0
      - alac__S_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10925
    - annotation: !!omap
      - biggr: KARA1
      - rhea: RHEA:22068
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__KARA2
    - name: Ketol-acid reductoisomerase (2-Acetolactate)
    - metabolites: !!omap
      - 23dhmp_c: 1.0
      - __iPKB_Clostridiaceae__2ahbut_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10925
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__KARA2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__KARI_1
    - name: Ketol-acid reductoisomerase
    - metabolites: !!omap
      - 3hmop_c: 1.0
      - __iPKB_Clostridiaceae__2ahbut_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10925
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__KARI_1
      - sbo: SBO:0000176
  - !!omap
    - id: KARI_23dhmp_1
    - name: Ketol-acid reductoisomerase, (R)-2,3-Dihydroxy-3-methylpentanoate 
        forming
    - metabolites: !!omap
      - 23dhmp_c: 1.0
      - 3hmop_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10925
    - annotation: !!omap
      - biggr: KARI_23dhmp_1
      - sbo: SBO:0000176
  - !!omap
    - id: KAS2
    - name: b-ketoacyl synthetase (n-C14:0)
    - metabolites: !!omap
      - accoa_c: -1.0
      - co2_c: 6.0
      - coa_c: 7.0
      - h2o_c: 5.0
      - h_c: -17.0
      - malcoa_c: -6.0
      - nadp_c: 12.0
      - nadph_c: -12.0
      - ttdca_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_16820 and 
        CLOINNGCF_022845735_16825 and CLOINNGCF_022845735_16830) or 
        (CLOINNGCF_022845735_16815 and CLOINNGCF_022845735_16820 and 
        CLOINNGCF_022845735_16825 and CLOINNGCF_022845735_16830)
    - annotation: !!omap
      - biggr: KAS2
      - sbo: SBO:0000176
  - !!omap
    - id: KAS8
    - name: b-ketoacyl synthetase (palmitate, n-C16:0)
    - metabolites: !!omap
      - accoa_c: -1.0
      - co2_c: 7.0
      - coa_c: 8.0
      - h2o_c: 6.0
      - h_c: -20.0
      - hdca_c: 1.0
      - malcoa_c: -7.0
      - nadp_c: 14.0
      - nadph_c: -14.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_16820 and 
        CLOINNGCF_022845735_16825 and CLOINNGCF_022845735_16830) or 
        (CLOINNGCF_022845735_16815 and CLOINNGCF_022845735_16820 and 
        CLOINNGCF_022845735_16825 and CLOINNGCF_022845735_16830)
    - annotation: !!omap
      - biggr: KAS8
      - sbo: SBO:0000176
  - !!omap
    - id: KG6PDC
    - name: 3-keto-L-gulonate 6-phosphate decarboxylase
    - metabolites: !!omap
      - 3dhgulnp_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - xu5p__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: KG6PDC
      - rhea: RHEA:14353
      - sbo: SBO:0000176
  - !!omap
    - id: Kabc
    - name: Potassium ABC transporter
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - k_c: 1.0
      - k_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10015 or 
        (CLOINNGCF_022845735_10005 and CLOINNGCF_022845735_10010)
    - annotation: !!omap
      - biggr: Kabc
      - sbo: SBO:0000655
  - !!omap
    - id: Kabcpp
    - name: Potassium ABC transporter (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - k_c: 1.0
      - k_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09960 or CLOINNGCF_022845735_10005
        or (CLOINNGCF_022845735_10005 and CLOINNGCF_022845735_10010)
    - annotation: !!omap
      - biggr: Kabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: Kt1
    - name: R_potassium_transport_via_voltage_gated_ion_channel
    - metabolites: !!omap
      - k_c: 1.0
      - k_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09000 or CLOINNGCF_022845735_09980
        or (CLOINNGCF_022845735_09985 and CLOINNGCF_022845735_09990)
    - annotation: !!omap
      - biggr: Kt1
      - sbo: SBO:0000655
  - !!omap
    - id: Kt2r
    - name: potassium reversible transport  via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - k_c: 1.0
      - k_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08995
    - annotation: !!omap
      - biggr: Kt2r
      - sbo: SBO:0000655
  - !!omap
    - id: Ktex
    - name: potassium transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - k_e: -1.0
      - k_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: Ktex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__LACpts
    - name: Lactose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__lac6p_c: 1.0
      - lcts_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01035
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__LACpts
      - sbo: SBO:0000655
  - !!omap
    - id: LALALGLUtex
    - name: L-alanyl-L-glutamate transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - LalaLglu_e: -1.0
      - LalaLglu_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: LALALGLUtex
      - sbo: SBO:0000655
  - !!omap
    - id: LALGP
    - name: L-alanyl-gamma-L-glutamate peptidase
    - metabolites: !!omap
      - LalaLglu_c: -1.0
      - ala__L_c: 1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15510
    - annotation: !!omap
      - biggr: LALGP
      - rhea: RHEA:29335
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__LASP2OA
    - name: L-Aspartate 2-oxoglutarate aminotransferase
    - metabolites: !!omap
      - Largn_c: -1.0
      - __iPKB_Clostridiaceae__pphn_c: 1.0
      - asp__L_c: 1.0
      - h_c: 1.0
      - oaa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__LASP2OA
      - sbo: SBO:0000176
  - !!omap
    - id: LCADi
    - name: lactaldehyde dehydrogenase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - lac__L_c: 1.0
      - lald__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: LCADi
      - rhea: RHEA:14277
      - sbo: SBO:0000176
  - !!omap
    - id: LCARS
    - name: lacaldehyde reductase (S-propane-1,2-diol forming)
    - metabolites: !!omap
      - 12ppd__S_c: 1.0
      - h_c: -1.0
      - lald__L_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04380
    - annotation: !!omap
      - biggr: LCARS
      - rhea: RHEA:15933
      - sbo: SBO:0000176
  - !!omap
    - id: LDGUNPD
    - name: linear diguanylate phosphodiesterase
    - metabolites: !!omap
      - 5pg35pg_c: -1.0
      - gmp_c: 2.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10150
    - annotation: !!omap
      - biggr: LDGUNPD
      - sbo: SBO:0000176
  - !!omap
    - id: LDH_D
    - name: D-lactate dehydrogenase
    - metabolites: !!omap
      - h_c: 1.0
      - lac__D_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03385 or CLOINNGCF_022845735_12045
    - annotation: !!omap
      - biggr: LDH_D
      - rhea: RHEA:16369
      - sbo: SBO:0000176
  - !!omap
    - id: LDH_L
    - name: L-lactate dehydrogenase
    - metabolites: !!omap
      - h_c: 1.0
      - lac__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18540
    - annotation: !!omap
      - biggr: LDH_L
      - rhea: RHEA:23444
      - sbo: SBO:0000176
  - !!omap
    - id: LEUTAi
    - name: leucine transaminase (irreversible)
    - metabolites: !!omap
      - 4mop_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - leu__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10230
    - annotation: !!omap
      - biggr: LEUTAi
      - rhea: RHEA:18321
      - sbo: SBO:0000176
  - !!omap
    - id: LEUabc
    - name: L-leucine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - leu__L_c: 1.0
      - leu__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_03580 and 
        CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03590 and 
        CLOINNGCF_022845735_03595 and CLOINNGCF_022845735_03600)
    - annotation: !!omap
      - biggr: LEUabc
      - sbo: SBO:0000655
  - !!omap
    - id: LEUt2r
    - name: L-leucine reversible transport via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - leu__L_c: 1.0
      - leu__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03910 or CLOINNGCF_022845735_18815
        or (CLOINNGCF_022845735_18810 and CLOINNGCF_022845735_18815)
    - annotation: !!omap
      - biggr: LEUt2r
      - sbo: SBO:0000655
  - !!omap
    - id: LSERDHr
    - name: L-serine dehydrogenase
    - metabolites: !!omap
      - 2amsa_c: 1.0
      - h_c: 1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02840
    - annotation: !!omap
      - biggr: LSERDHr
      - rhea: RHEA:21596
      - sbo: SBO:0000176
  - !!omap
    - id: LTHRK
    - name: L threonine kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - thr__L_c: -1.0
      - thrp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09495 or CLOINNGCF_022845735_09635
    - annotation: !!omap
      - biggr: LTHRK
      - rhea: RHEA:33707
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__LYSGLUGLYtr
    - name: Tripeptide transport
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__lysglugly_c: 1.0
      - __iPKB_Clostridiaceae__lysglugly_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__LYSGLUGLYtr
      - sbo: SBO:0000655
  - !!omap
    - id: LYSabc
    - name: L-lysine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - lys__L_c: 1.0
      - lys__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: LYSabc
      - sbo: SBO:0000655
  - !!omap
    - id: LacR
    - name: lactate racemase
    - metabolites: !!omap
      - lac__D_c: 1.0
      - lac__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18540
    - annotation: !!omap
      - biggr: LacR
      - rhea: RHEA:10960
      - sbo: SBO:0000176
  - !!omap
    - id: M1PD
    - name: mannitol-1-phosphate 5-dehydrogenase
    - metabolites: !!omap
      - f6p_c: 1.0
      - h_c: 1.0
      - mnl1p_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03305 or CLOINNGCF_022845735_03430
        or CLOINNGCF_022845735_03435 or CLOINNGCF_022845735_23970
    - annotation: !!omap
      - biggr: M1PD
      - rhea: RHEA:19661
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MACCOAT
    - name: 2-Methylacetyl-CoA thiolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2maacoa_c: -1.0
      - accoa_c: 1.0
      - coa_c: -1.0
      - ppcoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13880
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MACCOAT
      - sbo: SBO:0000176
  - !!omap
    - id: MAL6PG
    - name: R_maltose_6__phosphate_glucosidase
    - metabolites: !!omap
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - malt6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01055 or CLOINNGCF_022845735_01975
    - annotation: !!omap
      - biggr: MAL6PG
      - rhea: RHEA:20421
      - sbo: SBO:0000176
  - !!omap
    - id: MALT
    - name: alpha-glucosidase
    - metabolites: !!omap
      - glc__D_c: 2.0
      - h2o_c: -1.0
      - malt_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08565
    - annotation: !!omap
      - biggr: MALT
      - sbo: SBO:0000176
  - !!omap
    - id: MALTHPabc
    - name: MALTHPabc
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - malthp_c: 1.0
      - malthp_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18830
    - annotation: !!omap
      - biggr: MALTHPabc
      - sbo: SBO:0000655
  - !!omap
    - id: MALTHXabc
    - name: maltohexaose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - malthx_c: 1.0
      - malthx_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18695
    - annotation: !!omap
      - biggr: MALTHXabc
      - sbo: SBO:0000655
  - !!omap
    - id: MALTTRabc
    - name: Maltotriose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - malttr_c: 1.0
      - malttr_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18695
    - annotation: !!omap
      - biggr: MALTTRabc
      - sbo: SBO:0000655
  - !!omap
    - id: MALTabc
    - name: maltose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - malt_c: 1.0
      - malt_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18695 or CLOINNGCF_022845735_18710
        or CLOINNGCF_022845735_18830 or (CLOINNGCF_022845735_05615 and 
        CLOINNGCF_022845735_18305 and CLOINNGCF_022845735_18310)
    - annotation: !!omap
      - biggr: MALTabc
      - sbo: SBO:0000655
  - !!omap
    - id: MALTpts
    - name: maltose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - malt6p_c: 1.0
      - malt_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_22865 and 
        CLOINNGCF_022845735_24820) or (CLOINNGCF_022845735_01970 and 
        CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14730 and 
        CLOINNGCF_022845735_21945 and CLOINNGCF_022845735_23940)
    - annotation: !!omap
      - biggr: MALTpts
      - sbo: SBO:0000655
  - !!omap
    - id: MALTt2
    - name: R_maltose_transport_in_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - malt_c: 1.0
      - malt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: MALTt2
      - sbo: SBO:0000655
  - !!omap
    - id: MALt10
    - name: Malate HNa lactate antiporter
    - metabolites: !!omap
      - h_c: 2.0
      - h_e: -2.0
      - lac__L_c: -1.0
      - lac__L_e: 1.0
      - mal__L_c: 1.0
      - mal__L_e: -1.0
      - na1_c: -1.0
      - na1_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04330
    - annotation: !!omap
      - biggr: MALt10
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MALt3r
    - name: ''
    - metabolites: !!omap
      - h_c: -1.0
      - h_e: 1.0
      - mal__L_c: 1.0
      - mal__L_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_01240 or CLOINNGCF_022845735_01305
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MALt3r
      - sbo: SBO:0000655
  - !!omap
    - id: MALt5
    - name: Na+/malate symporter
    - metabolites: !!omap
      - mal__L_e: -1.0
      - mal__L_p: 1.0
      - na1_e: -1.0
      - na1_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MALt5
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MAN6PI
    - name: Mannose-6-phosphate isomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man6p_c: -1.0
      - f6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15100 or CLOINNGCF_022845735_19980
        or CLOINNGCF_022845735_20130 or CLOINNGCF_022845735_23950
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MAN6PI
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MANGLYCptspp
    - name: 2-O-alpha-mannosyl-D-glycerate transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man6pglyc_c: 1.0
      - manglyc_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03695
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MANGLYCptspp
      - sbo: SBO:0000655
  - !!omap
    - id: MANGLYCtex
    - name: 2-O-alpha-mannosyl-D-glycerate transport via diffusion 
        (extracellular to periplasm)
    - metabolites: !!omap
      - manglyc_e: -1.0
      - manglyc_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MANGLYCtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MANPGH
    - name: 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man6p_c: 1.0
      - __iPKB_Clostridiaceae__man6pglyc_c: -1.0
      - glyc__R_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23145
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MANPGH
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MANpts
    - name: D-mannose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man6p_c: 1.0
      - man_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_01820 and 
        CLOINNGCF_022845735_21055) or (CLOINNGCF_022845735_03730 and 
        CLOINNGCF_022845735_23960) or (CLOINNGCF_022845735_05520 and 
        CLOINNGCF_022845735_23960) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_14740 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_14745 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_14750 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945 and 
        CLOINNGCF_022845735_23155) or (CLOINNGCF_022845735_10365 and 
        CLOINNGCF_022845735_22660 and CLOINNGCF_022845735_22665) or 
        (CLOINNGCF_022845735_03280 and CLOINNGCF_022845735_18985 and 
        CLOINNGCF_022845735_23500 and CLOINNGCF_022845735_23510) or 
        (CLOINNGCF_022845735_04420 and CLOINNGCF_022845735_08825 and 
        CLOINNGCF_022845735_22145 and CLOINNGCF_022845735_23400) or 
        (CLOINNGCF_022845735_05525 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945 and CLOINNGCF_022845735_23940) or 
        (CLOINNGCF_022845735_14630 and CLOINNGCF_022845735_14635 and 
        CLOINNGCF_022845735_14640 and CLOINNGCF_022845735_14650)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MANpts
      - sbo: SBO:0000655
  - !!omap
    - id: MANt2
    - name: R_D_mannose_transport_in_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - man_c: 1.0
      - man_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: MANt2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MB2CFO
    - name: ''
    - metabolites: !!omap
      - 2mb2coa_c: 1.0
      - __iPKB_Clostridiaceae__m2bcoa_c: -1.0
      - fad_c: -1.0
      - fadh2_c: 1.0
      - h_c: 4.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13875
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MB2CFO
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MCBTFUexs
    - name: Mycobactin Fe loading reaction  spontaneous
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fe3mcbtt_e: 1.0
      - __iPKB_Clostridiaceae__mcbtt_e: -1.0
      - fe3_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MCBTFUexs
      - sbo: SBO:0000176
  - !!omap
    - id: MCSNAH
    - name: 5-Methylcytosine aminohydrolase
    - metabolites: !!omap
      - 5mcsn_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nh4_c:1: 1.0
      - thym_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00045
    - annotation: !!omap
      - biggr: MCSNAH
      - rhea: RHEA:30759
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MCTP1App
    - name: Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein5px4p_p: 1.0
      - ala__D_p: 1.0
      - murein5p5p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01740 or CLOINNGCF_022845735_13685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MCTP1App
      - sbo: SBO:0000176
  - !!omap
    - id: MCTP1Bpp
    - name: murein crosslinking transpeptidase 1B:(A2pm->A2pm) (periplasm)
    - metabolites: !!omap
      - alaala_p: 1.0
      - murein5p5p_p: -1.0
      - murein5px3p_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01740 or CLOINNGCF_022845735_13685
    - annotation: !!omap
      - biggr: MCTP1Bpp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MCTP2App
    - name: Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein5px4px4p_p: 1.0
      - ala__D_p: 2.0
      - murein5p5p5p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01740 or CLOINNGCF_022845735_13685
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MCTP2App
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MDDCP1pp
    - name: Murein D,D-carboxypeptidase (murein5px4p) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein4px4p_p: 1.0
      - __iPKB_Clostridiaceae__murein5px4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13120
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MDDCP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MDDCP2pp
    - name: Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein5px4px4p_p: -1.0
      - ala__D_p: 1.0
      - h2o_p: -1.0
      - murein4px4px4p_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13120
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MDDCP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: MDDCP3pp
    - name: murein D,D-carboxypeptidase (murein5p5p) (periplasm)
    - metabolites: !!omap
      - ala__D_p: 1.0
      - h2o_p: -1.0
      - murein5p4p_p: 1.0
      - murein5p5p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13120
    - annotation: !!omap
      - biggr: MDDCP3pp
      - sbo: SBO:0000176
  - !!omap
    - id: MDDCP4pp
    - name: murein D,D-carboxypeptidase (murein5p4p) (periplasm)
    - metabolites: !!omap
      - ala__D_p: 1.0
      - h2o_p: -1.0
      - murein4p4p_p: 1.0
      - murein5p4p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13120
    - annotation: !!omap
      - biggr: MDDCP4pp
      - sbo: SBO:0000176
  - !!omap
    - id: MDDCP5pp
    - name: murein D,D-carboxypeptidase (murein5p3p) (periplasm)
    - metabolites: !!omap
      - ala__D_p: 1.0
      - h2o_p: -1.0
      - murein4p3p_p: 1.0
      - murein5p3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13120
    - annotation: !!omap
      - biggr: MDDCP5pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MDDEP1pp
    - name: Murein D,D-endopeptidase (murein4px4p) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein4px4p_p: -1.0
      - h2o_p: -1.0
      - murein4p4p_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14050 or CLOINNGCF_022845735_17285
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MDDEP1pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MDDEP3pp
    - name: Murein D,D-endopeptidase (murein5px4p) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein5px4p_p: -1.0
      - h2o_p: -1.0
      - murein5p4p_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14050 or CLOINNGCF_022845735_17285
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MDDEP3pp
      - sbo: SBO:0000176
  - !!omap
    - id: MDDEP4pp
    - name: murein D,D-endopeptidase (murein4px4px4p) (periplasm)
    - metabolites: !!omap
      - h2o_p: -1.0
      - murein4px4p4p_p: 1.0
      - murein4px4px4p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14050 or CLOINNGCF_022845735_17285
    - annotation: !!omap
      - biggr: MDDEP4pp
      - sbo: SBO:0000176
  - !!omap
    - id: MDHi2
    - name: malate dehydrogenase
    - metabolites: !!omap
      - h_c: 1.0
      - mal__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - oaa_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22950
    - annotation: !!omap
      - biggr: MDHi2
      - rhea: RHEA:21432
      - sbo: SBO:0000176
  - !!omap
    - id: ME1
    - name: malic enzyme (NAD)
    - metabolites: !!omap
      - co2_c: 1.0
      - mal__L_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08495
    - annotation: !!omap
      - biggr: ME1
      - rhea: RHEA:12653
      - sbo: SBO:0000176
  - !!omap
    - id: ME2
    - name: malic enzyme (NADP)
    - metabolites: !!omap
      - co2_c: 1.0
      - mal__L_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08495
    - annotation: !!omap
      - biggr: ME2
      - rhea: RHEA:18253
      - sbo: SBO:0000176
  - !!omap
    - id: MECDPDH2
    - name: _2C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase
    - metabolites: !!omap
      - 2mecdp_c: -1.0
      - h2mb4p_c: 1.0
      - h2o_c: 1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12910
    - annotation: !!omap
      - biggr: MECDPDH2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MECDPDH4E
    - name: ''
    - metabolites: !!omap
      - 2mecdp_c: -1.0
      - fdxox_c: 1.0
      - fdxrd_c: -1.0
      - h2mb4p_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12910
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MECDPDH4E
      - sbo: SBO:0000176
  - !!omap
    - id: MECDPS
    - name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
    - metabolites: !!omap
      - 2mecdp_c: 1.0
      - 2p4c2me_c: -1.0
      - cmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24060
    - annotation: !!omap
      - biggr: MECDPS
      - rhea: RHEA:23864
      - sbo: SBO:0000176
  - !!omap
    - id: MEOHtex
    - name: Methanol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - meoh_e: -1.0
      - meoh_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: MEOHtex
      - sbo: SBO:0000655
  - !!omap
    - id: MEOHtrpp
    - name: Methanol reversible transport via diffusion (periplasm)
    - metabolites: !!omap
      - meoh_c: 1.0
      - meoh_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: MEOHtrpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MEPCT
    - name: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
    - metabolites: !!omap
      - 4c2me_c: 1.0
      - __iPKB_Clostridiaceae__2me4p_c: -1.0
      - ctp_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02910
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MEPCT
      - sbo: SBO:0000176
  - !!omap
    - id: METAT
    - name: methionine adenosyltransferase
    - metabolites: !!omap
      - amet_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - met__L_c: -1.0
      - pi_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01230 or CLOINNGCF_022845735_24865
    - annotation: !!omap
      - biggr: METAT
      - sbo: SBO:0000176
  - !!omap
    - id: METDabc
    - name: R_D_methionine_transport_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - met__D_c: 1.0
      - met__D_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10460 or CLOINNGCF_022845735_15440
        or CLOINNGCF_022845735_22000 or (CLOINNGCF_022845735_10460 and 
        CLOINNGCF_022845735_10465) or (CLOINNGCF_022845735_10470 and 
        CLOINNGCF_022845735_22000) or (CLOINNGCF_022845735_10470 and 
        CLOINNGCF_022845735_22015)
    - annotation: !!omap
      - biggr: METDabc
      - sbo: SBO:0000655
  - !!omap
    - id: METOX1s
    - name: methionine oxidation (spontaneous)
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 1.0
      - met__L_c: -1.0
      - metsox_S__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: METOX1s
      - sbo: SBO:0000176
  - !!omap
    - id: METOX2s
    - name: methionine oxidation 2 (spontaneous)
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 1.0
      - met__L_c: -1.0
      - metsox_R__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: METOX2s
      - sbo: SBO:0000176
  - !!omap
    - id: METS_1
    - name: methionine synthase
    - metabolites: !!omap
      - 5mthf_c: -1.0
      - h_c: 1.0
      - hcys__L_c: -1.0
      - met__L_c: 1.0
      - thf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02380 or CLOINNGCF_022845735_19410
        or CLOINNGCF_022845735_19415
    - annotation: !!omap
      - biggr: METS_1:2
      - rhea: RHEA:11172
      - sbo: SBO:0000176
  - !!omap
    - id: METSOX1abc
    - name: L-Methionine S-oxide transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - metsox_S__L_c: 1.0
      - metsox_S__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10470
    - annotation: !!omap
      - biggr: METSOX1abc
      - sbo: SBO:0000655
  - !!omap
    - id: METSOX2abc
    - name: L-Methionine R-oxide transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - metsox_R__L_c: 1.0
      - metsox_R__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10470
    - annotation: !!omap
      - biggr: METSOX2abc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__METSOXR1
    - name: L-methionine-S-oxide reductase
    - metabolites: !!omap
      - h2o_c: 1.0
      - met__L_c: 1.0
      - metsox_S__L_c: -1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02625 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_19725 or CLOINNGCF_022845735_24245 or 
        (CLOINNGCF_022845735_02625 and CLOINNGCF_022845735_04340) or 
        (CLOINNGCF_022845735_02625 and CLOINNGCF_022845735_07505) or 
        (CLOINNGCF_022845735_02625 and CLOINNGCF_022845735_09125) or 
        (CLOINNGCF_022845735_02625 and CLOINNGCF_022845735_24245) or 
        (CLOINNGCF_022845735_04340 and CLOINNGCF_022845735_19725) or 
        (CLOINNGCF_022845735_09125 and CLOINNGCF_022845735_19725)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__METSOXR1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__METSOXR2
    - name: L-methionine-R-sulfoxide reductase
    - metabolites: !!omap
      - h2o_c: 1.0
      - met__L_c: 1.0
      - metsox_R__L_c: -1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02625 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_09125 or CLOINNGCF_022845735_19725 or 
        CLOINNGCF_022845735_24245 or (CLOINNGCF_022845735_02625 and 
        CLOINNGCF_022845735_04340) or (CLOINNGCF_022845735_02625 and 
        CLOINNGCF_022845735_09125) or (CLOINNGCF_022845735_04340 and 
        CLOINNGCF_022845735_19725) or (CLOINNGCF_022845735_09125 and 
        CLOINNGCF_022845735_19725)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__METSOXR2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__METSR_S1
    - name: L methionine S oxide reductase  trdrd
    - metabolites: !!omap
      - h2o_c: 1.0
      - met__L_c: 1.0
      - metox_c: -1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02625 or CLOINNGCF_022845735_24090
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__METSR_S1
      - sbo: SBO:0000176
  - !!omap
    - id: METSR_S2
    - name: R_L_methionine_S_oxide_reductase__H2O2_
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 1.0
      - met__L_c: -1.0
      - metox_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02625
    - annotation: !!omap
      - biggr: METSR_S2
      - sbo: SBO:0000176
  - !!omap
    - id: METSabc
    - name: R_L_methionine_S_oxide_transport_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - metox_c: 1.0
      - metox_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10460 or CLOINNGCF_022845735_15440
    - annotation: !!omap
      - biggr: METSabc
      - sbo: SBO:0000655
  - !!omap
    - id: METabc
    - name: L-methionine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - met__L_c: 1.0
      - met__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10460 or CLOINNGCF_022845735_15440
        or CLOINNGCF_022845735_21125 or CLOINNGCF_022845735_21130 or 
        CLOINNGCF_022845735_22000 or (CLOINNGCF_022845735_10460 and 
        CLOINNGCF_022845735_10465) or (CLOINNGCF_022845735_10470 and 
        CLOINNGCF_022845735_22000)
    - annotation: !!omap
      - biggr: METabc
      - sbo: SBO:0000655
  - !!omap
    - id: METte
    - name: Methionine antiporter
    - metabolites: !!omap
      - h_c: -1.0
      - h_e: 1.0
      - met__D_c: 1.0
      - met__D_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_22060
    - annotation: !!omap
      - biggr: METte
      - sbo: SBO:0000655
  - !!omap
    - id: MG2tex
    - name: magnesium (Mg+2) transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - mg2_e: -1.0
      - mg2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10070
    - annotation: !!omap
      - biggr: MG2tex
      - sbo: SBO:0000655
  - !!omap
    - id: MG2uabcpp
    - name: Magnesium (Mg+2) ABC transporter (ubtake, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mg2_c: 1.0
      - mg2_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09570
    - annotation: !!omap
      - biggr: MG2uabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: MGSA
    - name: methylglyoxal synthase
    - metabolites: !!omap
      - dhap_c: -1.0
      - mthgxl_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: MGSA
      - rhea: RHEA:17937
      - sbo: SBO:0000176
  - !!omap
    - id: MGt2pp
    - name: magnesium transport in via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - mg2_c: 1.0
      - mg2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10070
    - annotation: !!omap
      - biggr: MGt2pp
      - sbo: SBO:0000655
  - !!omap
    - id: MGt5
    - name: Magnesium cation transport
    - metabolites: !!omap
      - mg2_c: -1.0
      - mg2_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02835 or CLOINNGCF_022845735_06955
        or CLOINNGCF_022845735_10070 or CLOINNGCF_022845735_11000 or 
        CLOINNGCF_022845735_15205
    - annotation: !!omap
      - biggr: MGt5
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MHPGLUT
    - name: 5 methyltetrahydropteroyltriglutamate homocysteine S 
        methyltransferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__mhpglu_c: -1.0
      - hcys__L_c: -1.0
      - hpglu_c: 1.0
      - met__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04740
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MHPGLUT
      - sbo: SBO:0000176
  - !!omap
    - id: MI1PP
    - name: myo-inositol 1-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - inost_c: 1.0
      - mi1p__D_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16750
    - annotation: !!omap
      - biggr: MI1PP
      - rhea: RHEA:27670
      - sbo: SBO:0000176
  - !!omap
    - id: MI1PP:2
    - name: myo-inositol 1-phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - inost_c: 1.0
      - mi1p__D_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16750
    - annotation: !!omap
      - biggr: MI1PP
      - rhea: RHEA:27670
      - sbo: SBO:0000176
  - !!omap
    - id: MI1PS
    - name: R_myo_Inositol_1_phosphate_synthase
    - metabolites: !!omap
      - g6p_c: -1.0
      - mi1p__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MI1PS
      - sbo: SBO:0000176
  - !!omap
    - id: MLDCP1Bpp
    - name: murein L,D-carboxypeptidase (murein4p4p) (periplasm)
    - metabolites: !!omap
      - ala__D_p: 1.0
      - h2o_p: -1.0
      - murein4p3p_p: 1.0
      - murein4p4p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MLDCP1Bpp
      - sbo: SBO:0000176
  - !!omap
    - id: MLDEP2pp
    - name: murein L,D-endopeptidase (murein5px3p) (periplasm)
    - metabolites: !!omap
      - h2o_p: -1.0
      - murein5p3p_p: 1.0
      - murein5px3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14050
    - annotation: !!omap
      - biggr: MLDEP2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MLG
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__lacgth_c: 1.0
      - gthrd_c: -1.0
      - h_c: -1.0
      - mthgxl_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09940 or CLOINNGCF_022845735_20960
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MLG
      - sbo: SBO:0000176
  - !!omap
    - id: MLTG1
    - name: Maltodextrin glucosidase (maltotriose)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - malt_c: 1.0
      - malttr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MLTG1
      - sbo: SBO:0000176
  - !!omap
    - id: MLTG2
    - name: Maltodextrin glucosidase (maltotetraose)
    - metabolites: !!omap
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - malttr_c: 1.0
      - maltttr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MLTG2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MLTGY2pp
    - name: Murein lytic transglycosylase (murein4p3p) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__anhgm3p_p: 1.0
      - anhgm4p_p: 1.0
      - murein4p3p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MLTGY2pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MLTGY4pp
    - name: Murein lytic transglycosylase (murein4px4p4p) (periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__murein4px4p_p: 1.0
      - anhgm4p_p: 1.0
      - murein4px4p4p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MLTGY4pp
      - sbo: SBO:0000176
  - !!omap
    - id: MLTP1
    - name: Maltodextrin phosphorylase (maltopentaose)
    - metabolites: !!omap
      - g1p_c: 1.0
      - maltpt_c: -1.0
      - maltttr_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08560
    - annotation: !!omap
      - biggr: MLTP1
      - sbo: SBO:0000176
  - !!omap
    - id: MLTP2
    - name: Maltodextrin phosphorylase (maltohexaose)
    - metabolites: !!omap
      - g1p_c: 1.0
      - malthx_c: -1.0
      - maltpt_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08560
    - annotation: !!omap
      - biggr: MLTP2
      - sbo: SBO:0000176
  - !!omap
    - id: MLTP3
    - name: Maltodextrin phosphorylase (maltoheptaose)
    - metabolites: !!omap
      - g1p_c: 1.0
      - malthp_c: -1.0
      - malthx_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08560
    - annotation: !!omap
      - biggr: MLTP3
      - sbo: SBO:0000176
  - !!omap
    - id: MN2tpp
    - name: manganese transport in via permease (no H+)
    - metabolites: !!omap
      - mn2_c: -1.0
      - mn2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24075
    - annotation: !!omap
      - biggr: MN2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: MN2tpp:2
    - name: manganese transport in via permease (no H+)
    - metabolites: !!omap
      - mn2_c: 1.0
      - mn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08540
    - annotation: !!omap
      - biggr: MN2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MN6PP
    - name: Mannose 6-phosphate phosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man6p_c: -1.0
      - h2o_c: -1.0
      - man_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430 or CLOINNGCF_022845735_05880
        or CLOINNGCF_022845735_07735 or CLOINNGCF_022845735_10750
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MN6PP
      - sbo: SBO:0000176
  - !!omap
    - id: MNLpts
    - name: mannitol transport via PEP:Pyr PTS
    - metabolites: !!omap
      - mnl1p_c: 1.0
      - mnl_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19145 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_19140 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_19145 and CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: MNLpts
      - sbo: SBO:0000655
  - !!omap
    - id: MNLptspp
    - name: mannitol transport via PEP:Pyr PTS (periplasm)
    - metabolites: !!omap
      - mnl1p_c: 1.0
      - mnl_p: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19145 or 
        (CLOINNGCF_022845735_02870 and CLOINNGCF_022845735_02875) or 
        (CLOINNGCF_022845735_23980 and CLOINNGCF_022845735_23990)
    - annotation: !!omap
      - biggr: MNLptspp
      - sbo: SBO:0000655
  - !!omap
    - id: MNLtex
    - name: mannitol transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - mnl_e: -1.0
      - mnl_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MNLtex
      - sbo: SBO:0000655
  - !!omap
    - id: MNabc
    - name: manganese transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mn2_c: 1.0
      - mn2_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02530 or CLOINNGCF_022845735_21805
    - annotation: !!omap
      - biggr: MNabc
      - sbo: SBO:0000655
  - !!omap
    - id: MNabc_1
    - name: manganese transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mn2_c: 1.0
      - mn2_p: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19180
    - annotation: !!omap
      - biggr: MNabc_1
      - sbo: SBO:0000655
  - !!omap
    - id: MOHMT
    - name: 3-methyl-2-oxobutanoate hydroxymethyltransferase
    - metabolites: !!omap
      - 2dhp_c: 1.0
      - 3mob_c: -1.0
      - h2o_c: -1.0
      - mlthf_c: -1.0
      - thf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MOHMT
      - rhea: RHEA:11824
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MPTG
    - name: Murein polymerizing transglycosylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uaagmda_c: -2.0
      - __iPKB_Clostridiaceae__udcpdp_c: 2.0
      - h_c: 2.0
      - murein5p5p_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00085 or CLOINNGCF_022845735_01740
        or CLOINNGCF_022845735_13685 or CLOINNGCF_022845735_14835 or 
        CLOINNGCF_022845735_15720 or (CLOINNGCF_022845735_00085 and 
        CLOINNGCF_022845735_13685) or (CLOINNGCF_022845735_01740 and 
        CLOINNGCF_022845735_14835) or (CLOINNGCF_022845735_13685 and 
        CLOINNGCF_022845735_14835)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MPTG
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MPTG2
    - name: Murein polymerizing transglycosylase 2 (three linked units)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uaagmda_c: -1.0
      - __iPKB_Clostridiaceae__udcpdp_c: 1.0
      - h_c: 1.0
      - murein5p5p5p_p: 1.0
      - murein5p5p_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00085 or CLOINNGCF_022845735_01740
        or CLOINNGCF_022845735_13685 or CLOINNGCF_022845735_14835 or 
        (CLOINNGCF_022845735_00085 and CLOINNGCF_022845735_13685) or 
        (CLOINNGCF_022845735_01740 and CLOINNGCF_022845735_14835) or 
        (CLOINNGCF_022845735_13685 and CLOINNGCF_022845735_14835)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MPTG2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__MSADC
    - name: ''
    - metabolites: !!omap
      - acald_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
      - msa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MSADC
      - rhea: RHEA:45160
      - sbo: SBO:0000176
  - !!omap
    - id: MSO3abc
    - name: R_methanesulfonate_transport_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - mso3_c: 1.0
      - mso3_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14540
    - annotation: !!omap
      - biggr: MSO3abc
      - sbo: SBO:0000655
  - !!omap
    - id: MSULR
    - name: R_Metanesulfonate_reductase__NADPH2_
    - metabolites: !!omap
      - ch4s_c: -1.0
      - h2o_c: -3.0
      - h_c: 4.0
      - mso3_c: 1.0
      - nadp_c: -3.0
      - nadph_c: 3.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: MSULR
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__MHPGLUT:2
    - name: 5 methyltetrahydropteroyltriglutamate homocysteine S 
        methyltransferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__mhpglu_c: -1.0
      - hcys__L_c: -1.0
      - hpglu_c: 1.0
      - met__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__MHPGLUT
      - sbo: SBO:0000176
  - !!omap
    - id: MTAN
    - name: methylthioadenosine nucleosidase
    - metabolites: !!omap
      - 5mta_c: -1.0
      - 5mtr_c: 1.0
      - ade_c: 1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02140 or CLOINNGCF_022845735_11835
    - annotation: !!omap
      - biggr: MTAN
      - rhea: RHEA:13617
      - sbo: SBO:0000176
  - !!omap
    - id: MTHFC_1
    - name: methenyltetrahydrofolate cyclohydrolase
    - metabolites: !!omap
      - 10fthf_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - methf_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01655 or CLOINNGCF_022845735_23530
    - annotation: !!omap
      - biggr: MTHFC_1
      - rhea: RHEA:23700
      - sbo: SBO:0000176
  - !!omap
    - id: MTHFD
    - name: methylenetetrahydrofolate dehydrogenase (NADP)
    - metabolites: !!omap
      - methf_c: 1.0
      - mlthf_c: -1.0
      - nadp_c: -1.0
      - nadph_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01655
    - annotation: !!omap
      - biggr: MTHFD
      - rhea: RHEA:22812
      - sbo: SBO:0000176
  - !!omap
    - id: MTHFR3_1
    - name: 5,10-methylenetetrahydrofolatereductase (NADPH)
    - metabolites: !!omap
      - 5mthf_c: 1.0
      - h_c: -2.0
      - mlthf_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04735
    - annotation: !!omap
      - biggr: MTHFR3_1:2
      - rhea: RHEA:19817
      - sbo: SBO:0000176
  - !!omap
    - id: MTHFR3_1:2
    - name: 5,10-methylenetetrahydrofolatereductase (NADPH)
    - metabolites: !!omap
      - 5mthf_c: 1.0
      - h_c: -2.0
      - mlthf_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19410
    - annotation: !!omap
      - biggr: MTHFR3_1:2
      - rhea: RHEA:19817
      - sbo: SBO:0000176
  - !!omap
    - id: MTHTHFSs
    - name: (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran synthesis 
        (spontaneous)
    - metabolites: !!omap
      - h2o_c: -1.0
      - mdhdhf_c: -1.0
      - mththf_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: MTHTHFSs
      - rhea: RHEA:35159
      - sbo: SBO:0000176
  - !!omap
    - id: MTRI
    - name: _5-methylthioribose-1-phosphate isomerase
    - metabolites: !!omap
      - 5mdr1p_c: -1.0
      - 5mdru1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22050
    - annotation: !!omap
      - biggr: MTRI
      - rhea: RHEA:19989
      - sbo: SBO:0000176
  - !!omap
    - id: MTRK
    - name: _5-methylthioribose kinase
    - metabolites: !!omap
      - 5mdr1p_c: 1.0
      - 5mtr_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22055
    - annotation: !!omap
      - biggr: MTRK
      - rhea: RHEA:22312
      - sbo: SBO:0000176
  - !!omap
    - id: NPH
    - name: NAD diphosphatase
    - metabolites: !!omap
      - amp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nmn_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02150
    - annotation: !!omap
      - biggr: NPH
      - rhea: RHEA:11800
      - sbo: SBO:0000176
  - !!omap
    - id: NPH:2
    - name: NAD diphosphatase
    - metabolites: !!omap
      - amp_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - nad_c: -1.0
      - nmn_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19300
    - annotation: !!omap
      - biggr: NPH
      - rhea: RHEA:11800
      - sbo: SBO:0000176
  - !!omap
    - id: NADH6
    - name: NADH dehydrogenase (ubiquinone-8 & 3.5 protons)
    - metabolites: !!omap
      - h_c: -4.5
      - h_e: 3.5
      - nad_c: 1.0
      - nadh_c: -1.0
      - q8_c: -1.0
      - q8h2_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21400
    - annotation: !!omap
      - biggr: NADH6
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__NADHHR
    - name: NADH hydratase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__nadhx__R_c: 1.0
      - h2o_c: -1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NADHHR
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NADHXD
    - name: NADHX dehydratase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__nadhx__S_c: -1.0
      - adp_c: -1.0
      - amp_c: 1.0
      - h_c: 1.0
      - nadh_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16905
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NADHXD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NADHXE
    - name: NADHX epimerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__nadhx__R_c: 1.0
      - __iPKB_Clostridiaceae__nadhx__S_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16905
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NADHXE
      - sbo: SBO:0000176
  - !!omap
    - id: NADK
    - name: NAD kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK
      - rhea: RHEA:18629
      - sbo: SBO:0000176
  - !!omap
    - id: NADK1
    - name: R_NAD_kinase__GTP_
    - metabolites: !!omap
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK1
      - rhea: RHEA:75171
      - sbo: SBO:0000176
  - !!omap
    - id: NADK2
    - name: R_NAD_kinase__dATP_
    - metabolites: !!omap
      - dadp_c: 1.0
      - datp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK2
      - rhea: RHEA:75175
      - sbo: SBO:0000176
  - !!omap
    - id: NADK3
    - name: R_NAD_kinase__dGTP_
    - metabolites: !!omap
      - dgdp_c: 1.0
      - dgtp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK3
      - sbo: SBO:0000176
  - !!omap
    - id: NADK4
    - name: R_NAD_kinase__dCTP_
    - metabolites: !!omap
      - dcdp_c: 1.0
      - dctp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK4
      - sbo: SBO:0000176
  - !!omap
    - id: NADK5
    - name: R_NAD_kinase__dTTP_
    - metabolites: !!omap
      - dtdp_c: 1.0
      - dttp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK5
      - sbo: SBO:0000176
  - !!omap
    - id: NADK:2
    - name: NAD kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK
      - rhea: RHEA:18629
      - sbo: SBO:0000176
  - !!omap
    - id: NADK5:2
    - name: R_NAD_kinase__dTTP_
    - metabolites: !!omap
      - dtdp_c: 1.0
      - dttp_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00080
    - annotation: !!omap
      - biggr: NADK5
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NADPHHR
    - name: NADPH hydratase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__nadphx__R_c: 1.0
      - h2o_c: -1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NADPHHR
      - sbo: SBO:0000176
  - !!omap
    - id: NADPHQR3
    - name: NADPH Quinone Reductase (Menaquinone-8)
    - metabolites: !!omap
      - h_c: -1.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21395
    - annotation: !!omap
      - biggr: NADPHQR3
      - rhea: RHEA:29115
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NADPHXD
    - name: NADPHX dehydratase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__nadphx__S_c: -1.0
      - adp_c: -1.0
      - amp_c: 1.0
      - h_c: 1.0
      - nadph_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16905
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NADPHXD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NADPHXE
    - name: NADPHX epimerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__nadphx__R_c: -1.0
      - __iPKB_Clostridiaceae__nadphx__S_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16905
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NADPHXE
      - sbo: SBO:0000176
  - !!omap
    - id: NADS1
    - name: NAD synthase (nh3)
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - dnad_c: -1.0
      - h_c: 1.0
      - nad_c: 1.0
      - nh4_c:1: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09190
    - annotation: !!omap
      - biggr: NADS1
      - rhea: RHEA:21188
      - sbo: SBO:0000176
  - !!omap
    - id: NADS2
    - name: Nicotinate-mononucleotide adenylyltransferase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - dnad_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - nad_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08950 or CLOINNGCF_022845735_09190
    - annotation: !!omap
      - biggr: NADS2
      - rhea: RHEA:24384
      - sbo: SBO:0000176
  - !!omap
    - id: NAPRT
    - name: NAPRTase (rev)
    - metabolites: !!omap
      - h_c: -1.0
      - nac_c: -1.0
      - nicrnt_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10420
    - annotation: !!omap
      - biggr: NAPRT
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NAabc
    - name: ''
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - na1_c: 1.0
      - na1_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00555 or CLOINNGCF_022845735_13255
        or CLOINNGCF_022845735_14860
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NAabc
      - sbo: SBO:0000655
  - !!omap
    - id: NAabcO
    - name: Sodium transport out via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - na1_c: -1.0
      - na1_e: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14860 or 
        (CLOINNGCF_022845735_15990 and CLOINNGCF_022845735_15995 and 
        CLOINNGCF_022845735_16000)
    - annotation: !!omap
      - biggr: NAabcO
      - sbo: SBO:0000655
  - !!omap
    - id: NAt3_2
    - name: sodium proton antiporter (H:NA is 2)
    - metabolites: !!omap
      - h_c: 2.0
      - h_e: -2.0
      - na1_c: -1.0
      - na1_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16035
    - annotation: !!omap
      - biggr: NAt3_2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__NAt6
    - name: ''
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - na1_c: 1.0
      - na1_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01475
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NAt6
      - sbo: SBO:0000655
  - !!omap
    - id: NBAHH_ir
    - name: Nalpha-(beta-alanyl)-L-histidine hydrolase IR
    - metabolites: !!omap
      - ala_B_c: 1.0
      - carn_c: -1.0
      - h2o_c: -1.0
      - his__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22935
    - annotation: !!omap
      - biggr: NBAHH_ir
      - rhea: RHEA:59360
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK1
    - name: nucleoside-diphosphate kinase (ATP:GDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gdp_c: -1.0
      - gtp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK1
      - rhea: RHEA:27686
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK10
    - name: nucleoside-diphosphate kinase (ATP_dIDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - didp_c: -1.0
      - ditp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK10
      - rhea: RHEA:30939
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK2
    - name: nucleoside-diphosphate kinase (ATP:UDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - udp_c: -1.0
      - utp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK2
      - rhea: RHEA:25098
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK3
    - name: nucleoside-diphosphate kinase (ATP:CDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - cdp_c: -1.0
      - ctp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK3
      - rhea: RHEA:25237
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK4
    - name: nucleoside-diphosphate kinase (ATP:dTDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dtdp_c: -1.0
      - dttp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK4
      - rhea: RHEA:27682
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK5
    - name: nucleoside-diphosphate kinase (ATP:dGDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dgdp_c: -1.0
      - dgtp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK5
      - rhea: RHEA:27690
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK6
    - name: nucleoside-diphosphate kinase (ATP:dUDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dudp_c: -1.0
      - dutp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK6
      - rhea: RHEA:28582
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK7
    - name: nucleoside-diphosphate kinase (ATP:dCDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dcdp_c: -1.0
      - dctp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK7
      - rhea: RHEA:27678
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK8
    - name: nucleoside-diphosphate kinase (ATP:dADP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dadp_c: -1.0
      - datp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK8
      - rhea: RHEA:27674
      - sbo: SBO:0000176
  - !!omap
    - id: NDPK9
    - name: nucleoside-diphosphate kinase (ATP:IDP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - idp_c: -1.0
      - itp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19405
    - annotation: !!omap
      - biggr: NDPK9
      - rhea: RHEA:30347
      - sbo: SBO:0000176
  - !!omap
    - id: NH3c
    - name: nh4 Dissociation
    - metabolites: !!omap
      - h_c: -1.0
      - nh4_c:0: -1.0
      - nh4_c:1: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: NH3c:2
      - sbo: SBO:0000176
  - !!omap
    - id: NH4t
    - name: ammonia reversible transport
    - metabolites: !!omap
      - nh4_c:1: 1.0
      - nh4_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11740
    - annotation: !!omap
      - biggr: NH4t
      - sbo: SBO:0000655
  - !!omap
    - id: NH4tex
    - name: ammonia transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - nh4_e: -1.0
      - nh4_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: NH4tex
      - sbo: SBO:0000655
  - !!omap
    - id: NH4tpp
    - name: ammonia reversible transport (periplasm)
    - metabolites: !!omap
      - nh4_c:1: 1.0
      - nh4_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: NH4tpp
      - sbo: SBO:0000655
  - !!omap
    - id: NH4tpp_1
    - name: ammonia ireversible transport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - nh4_c:1: 1.0
      - nh4_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11735
    - annotation: !!omap
      - biggr: NH4tpp_1
      - sbo: SBO:0000655
  - !!omap
    - id: NIabc
    - name: nickel transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ni2_c: 1.0
      - ni2_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19180 or CLOINNGCF_022845735_22015
        or (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_19180)
    - annotation: !!omap
      - biggr: NIabc
      - sbo: SBO:0000655
  - !!omap
    - id: NIt5
    - name: nickel transport in/out via permease(noH+)
    - metabolites: !!omap
      - ni2_c: -1.0
      - ni2_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10070
    - annotation: !!omap
      - biggr: NIt5
      - sbo: SBO:0000655
  - !!omap
    - id: NMNAT
    - name: nicotinamide-nucleotide adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nmn_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11820
    - annotation: !!omap
      - biggr: NMNAT
      - rhea: RHEA:21360
      - sbo: SBO:0000176
  - !!omap
    - id: NMNS
    - name: NMN synthetase
    - metabolites: !!omap
      - h_c: -1.0
      - ncam_c: -1.0
      - nmn_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: NMNS
      - rhea: RHEA:16149
      - sbo: SBO:0000176
  - !!omap
    - id: NNATr
    - name: nicotinate-nucleotide adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - dnad_c: 1.0
      - h_c: -1.0
      - nicrnt_c: -1.0
      - ppi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11820
    - annotation: !!omap
      - biggr: NNATr
      - rhea: RHEA:22860
      - sbo: SBO:0000176
  - !!omap
    - id: NNDPR
    - name: nicotinate-nucleotide diphosphorylase (carboxylating)
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -2.0
      - nicrnt_c: 1.0
      - ppi_c: 1.0
      - prpp_c: -1.0
      - quln_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01110
    - annotation: !!omap
      - biggr: NNDPR
      - rhea: RHEA:12733
      - sbo: SBO:0000176
  - !!omap
    - id: NO3R1pp
    - name: Nitrate reductase (Ubiquinol-8) (periplasm)
    - metabolites: !!omap
      - h2o_c: 1.0
      - h_c: -2.0
      - h_p: 2.0
      - no2_c: 1.0
      - no3_c: -1.0
      - q8_c: 1.0
      - q8h2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: NO3R1pp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__NO3abc
    - name: ''
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - no3_c: 1.0
      - no3_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14540 or CLOINNGCF_022845735_15630
        or (CLOINNGCF_022845735_03965 and CLOINNGCF_022845735_03970 and 
        CLOINNGCF_022845735_03975)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NO3abc
      - sbo: SBO:0000655
  - !!omap
    - id: NOX
    - name: NADH oxidase H2O2 forming
    - metabolites: !!omap
      - h2o2_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - o2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02820 and 
        CLOINNGCF_022845735_02825
    - annotation: !!omap
      - biggr: NOX
      - rhea: RHEA:11264
      - sbo: SBO:0000176
  - !!omap
    - id: NOtpp
    - name: NO transport (diffusion)
    - metabolites: !!omap
      - no_c: 1.0
      - no_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: NOtpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__NPHS
    - name: Naphthoate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__sbzcoa_c: -1.0
      - coa_c: 1.0
      - dhna_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13855
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NPHS
      - sbo: SBO:0000176
  - !!omap
    - id: NTD1
    - name: 5'-nucleotidase (dUMP)
    - metabolites: !!omap
      - dump_c: -1.0
      - duri_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06695
    - annotation: !!omap
      - biggr: NTD1
      - rhea: RHEA:29355
      - sbo: SBO:0000176
  - !!omap
    - id: NTD11
    - name: 5'-nucleotidase (IMP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - imp_c: -1.0
      - ins_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12650
    - annotation: !!omap
      - biggr: NTD11
      - rhea: RHEA:27718
      - sbo: SBO:0000176
  - !!omap
    - id: NTD12
    - name: 5'-nucleotidase (dIMP)
    - metabolites: !!omap
      - dimp_c: -1.0
      - din_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: NTD12
      - rhea: RHEA:29383
      - sbo: SBO:0000176
  - !!omap
    - id: NTD2
    - name: 5'-nucleotidase (UMP)
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - ump_c: -1.0
      - uri_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06695
    - annotation: !!omap
      - biggr: NTD2
      - rhea: RHEA:29359
      - sbo: SBO:0000176
  - !!omap
    - id: NTD5
    - name: 5'-nucleotidase (dTMP)
    - metabolites: !!omap
      - dtmp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - thymd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06695
    - annotation: !!omap
      - biggr: NTD5
      - rhea: RHEA:11080
      - sbo: SBO:0000176
  - !!omap
    - id: NTD7
    - name: 5'-nucleotidase (AMP)
    - metabolites: !!omap
      - adn_c: 1.0
      - amp_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12650
    - annotation: !!omap
      - biggr: NTD7
      - rhea: RHEA:29375
      - sbo: SBO:0000176
  - !!omap
    - id: ATPM
    - name: ATP maintenance requirement
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15165
    - subsystem: Biomass and maintenance functions
    - annotation: !!omap
      - biggr: ATPM
      - rhea: RHEA:13065
      - sbo: SBO:0000176
  - !!omap
    - id: NTP11
    - name: nucleoside-triphosphatase (dITP)
    - metabolites: !!omap
      - didp_c: 1.0
      - ditp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTP11
      - rhea: RHEA:30859
      - sbo: SBO:0000176
  - !!omap
    - id: NTP3
    - name: nucleoside-triphosphatase (GTP)
    - metabolites: !!omap
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03930 or CLOINNGCF_022845735_13290
        or CLOINNGCF_022845735_16895 or CLOINNGCF_022845735_21265 or 
        (CLOINNGCF_022845735_03930 and CLOINNGCF_022845735_03935 and 
        CLOINNGCF_022845735_04860)
    - annotation: !!omap
      - biggr: NTP3
      - rhea: RHEA:19669
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP10
    - name: Nucleoside triphosphate pyrophosphorylase (ditp)
    - metabolites: !!omap
      - dimp_c: 1.0
      - ditp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09595 or CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP10
      - rhea: RHEA:28342
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP10:2
    - name: Nucleoside triphosphate pyrophosphorylase (ditp)
    - metabolites: !!omap
      - dimp_c: 1.0
      - ditp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP10
      - rhea: RHEA:28342
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP11_1
    - name: Nucleoside triphosphate pyrophosphorylase (xtp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - xmp_c: 1.0
      - xtp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09595 or CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP11_1
      - rhea: RHEA:28610
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP11_1:2
    - name: Nucleoside triphosphate pyrophosphorylase (xtp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - xmp_c: 1.0
      - xtp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP11_1
      - rhea: RHEA:28610
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP1
    - name: Nucleoside triphosphate pyrophosphorylase (dgtp)
    - metabolites: !!omap
      - dgmp_c: 1.0
      - dgtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP1
      - rhea: RHEA:28362
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP2_1
    - name: Nucleoside triphosphate pyrophosphorylase (gtp)
    - metabolites: !!omap
      - gmp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP2_1
      - rhea: RHEA:29391
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP3
    - name: Nucleoside triphosphate pyrophosphorylase (dctp)
    - metabolites: !!omap
      - dcmp_c: 1.0
      - dctp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01905 or CLOINNGCF_022845735_23615
    - annotation: !!omap
      - biggr: NTPP3
      - rhea: RHEA:22636
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP4
    - name: Nucleoside triphosphate pyrophosphorylase (ctp)
    - metabolites: !!omap
      - cmp_c: 1.0
      - ctp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23615
    - annotation: !!omap
      - biggr: NTPP4
      - rhea: RHEA:27762
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP5
    - name: Nucleoside triphosphate pyrophosphorylase (datp)
    - metabolites: !!omap
      - damp_c: 1.0
      - datp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01905
    - annotation: !!omap
      - biggr: NTPP5
      - rhea: RHEA:28334
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP7
    - name: Nucleoside triphosphate pyrophosphorylase (dttp)
    - metabolites: !!omap
      - dtmp_c: 1.0
      - dttp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01905 or CLOINNGCF_022845735_19745
    - annotation: !!omap
      - biggr: NTPP7
      - rhea: RHEA:28534
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP8
    - name: Nucleoside triphosphate pyrophosphorylase (utp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - ump_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19745
    - annotation: !!omap
      - biggr: NTPP8
      - rhea: RHEA:29395
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP8:2
    - name: Nucleoside triphosphate pyrophosphorylase (utp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - ump_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP8
      - rhea: RHEA:29395
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP9_1
    - name: Nucleoside triphosphate pyrophosphorylase (itp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - imp_c: 1.0
      - itp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09595 or CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP9_1
      - rhea: RHEA:29399
      - sbo: SBO:0000176
  - !!omap
    - id: NTPP9_1:2
    - name: Nucleoside triphosphate pyrophosphorylase (itp)
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - imp_c: 1.0
      - itp_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10790
    - annotation: !!omap
      - biggr: NTPP9_1
      - rhea: RHEA:29399
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NTPTP1
    - name: Nucleoside triphosphate tripolyhydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pppi_c: 1.0
      - dgsn_c: 1.0
      - dgtp_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07490 or CLOINNGCF_022845735_22625
        or CLOINNGCF_022845735_22630
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NTPTP1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__NTPTP2
    - name: Nucleoside triphosphate tripolyhydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pppi_c: 1.0
      - gsn_c: 1.0
      - gtp_c: -1.0
      - h2o_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22625 or CLOINNGCF_022845735_22630
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__NTPTP2
      - sbo: SBO:0000176
  - !!omap
    - id: NTRIR2x
    - name: nitrite Reductase (NADH)
    - metabolites: !!omap
      - h2o_c: 2.0
      - h_c: -5.0
      - nad_c: 3.0
      - nadh_c: -3.0
      - nh4_c:1: 1.0
      - no2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11650 or CLOINNGCF_022845735_12810
    - annotation: !!omap
      - biggr: NTRIR2x
      - rhea: RHEA:24628
      - sbo: SBO:0000176
  - !!omap
    - id: NTRIR2y
    - name: Nitrite Reductase (NADPH)
    - metabolites: !!omap
      - h2o_c: 2.0
      - h_c: -5.0
      - nadp_c: 3.0
      - nadph_c: -3.0
      - nh4_c:1: 1.0
      - no2_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12810
    - annotation: !!omap
      - biggr: NTRIR2y
      - rhea: RHEA:24632
      - sbo: SBO:0000176
  - !!omap
    - id: O2tex
    - name: oxygen transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - o2_e: -1.0
      - o2_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: O2tex
      - sbo: SBO:0000655
  - !!omap
    - id: O2tpp
    - name: o2 transport via diffusion (periplasm)
    - metabolites: !!omap
      - o2_c: 1.0
      - o2_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: O2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: OAADC
    - name: oxaloacetate decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -1.0
      - oaa_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08495
    - annotation: !!omap
      - biggr: OAADC
      - rhea: RHEA:15641
      - sbo: SBO:0000176
  - !!omap
    - id: OBTFL
    - name: 2-Oxobutanoate formate lyase
    - metabolites: !!omap
      - 2obut_c: -1.0
      - coa_c: -1.0
      - for_c: 1.0
      - ppcoa_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14515 or CLOINNGCF_022845735_16450
        or (CLOINNGCF_022845735_00710 and CLOINNGCF_022845735_05420) or 
        (CLOINNGCF_022845735_00710 and CLOINNGCF_022845735_05540) or 
        (CLOINNGCF_022845735_15230 and CLOINNGCF_022845735_15235)
    - annotation: !!omap
      - biggr: OBTFL
      - rhea: RHEA:28054
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__OCBT
    - name: Ornithine carbamoyltransferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__orn__L_DUP1_c: -1.0
      - cbp_c: -1.0
      - citr__L_c: 1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13730
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__OCBT
      - sbo: SBO:0000176
  - !!omap
    - id: OCBT2i
    - name: ornithine carbamoyltransferase
    - metabolites: !!omap
      - cbp_c: -1.0
      - citr__L_c: 1.0
      - h_c: 1.0
      - orn__L_c:1: -1.0
      - pi_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13730
    - annotation: !!omap
      - biggr: OCBT2i
      - rhea: RHEA:19513
      - sbo: SBO:0000176
  - !!omap
    - id: OCOAT1
    - name: '3-oxoacid CoA-transferase (Succinyl-CoA: acetoacetate)'
    - metabolites: !!omap
      - aacoa_c: 1.0
      - acac_c: -1.0
      - succ_c: 1.0
      - succoa_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: OCOAT1
      - rhea: RHEA:25480
      - sbo: SBO:0000176
  - !!omap
    - id: OCTDPS
    - name: Octaprenyl pyrophosphate synthase
    - metabolites: !!omap
      - frdp_c: -1.0
      - ipdp_c: -5.0
      - octdp_c: 1.0
      - ppi_c: 5.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: OCTDPS
      - rhea: RHEA:27798
      - sbo: SBO:0000176
  - !!omap
    - id: OHPBAT
    - name: O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase
    - metabolites: !!omap
      - akg_c: 1.0
      - glu__L_c: -1.0
      - ohpb_c: -1.0
      - phthr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18795
    - annotation: !!omap
      - biggr: OHPBAT
      - rhea: RHEA:16573
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__OIVD2E
    - name: ''
    - metabolites: !!omap
      - 3mop_c: -1.0
      - __iPKB_Clostridiaceae__m2bcoa_c: 1.0
      - co2_c: 1.0
      - coa_c: -1.0
      - h_c: -4.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__OIVD2E
      - sbo: SBO:0000176
  - !!omap
    - id: OMCDC
    - name: 2-Oxo-4-methyl-3-carboxypentanoate decarboxylation
    - metabolites: !!omap
      - 3c4mop_c: -1.0
      - 4mop_c: 1.0
      - co2_c: 1.0
      - h_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15070 or CLOINNGCF_022845735_16515
        or spontaneous
    - annotation: !!omap
      - biggr: OMCDC
      - rhea: RHEA:25078
      - sbo: SBO:0000176
  - !!omap
    - id: OMPDC
    - name: orotidine-5'-phosphate decarboxylase
    - metabolites: !!omap
      - co2_c: 1.0
      - h_c: -1.0
      - orot5p_c: -1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14575
    - annotation: !!omap
      - biggr: OMPDC
      - rhea: RHEA:11596
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__ORNTAC
    - name: Ornithine transacetylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__orn__L_DUP1_c: 1.0
      - acglu_c: 1.0
      - acorn_c: -1.0
      - glu__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13745
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__ORNTAC
      - sbo: SBO:0000176
  - !!omap
    - id: ORPT
    - name: orotate phosphoribosyltransferase
    - metabolites: !!omap
      - orot5p_c: -1.0
      - orot_c: 1.0
      - ppi_c: -1.0
      - prpp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14570
    - annotation: !!omap
      - biggr: ORPT
      - rhea: RHEA:10380
      - sbo: SBO:0000176
  - !!omap
    - id: P5CR
    - name: pyrroline-5-carboxylate reductase
    - metabolites: !!omap
      - h_c: -2.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - pro__L_c: 1.0
      - pyr5carb_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16445 or CLOINNGCF_022845735_19200
    - annotation: !!omap
      - biggr: P5CR
      - rhea: RHEA:14109
      - sbo: SBO:0000176
  - !!omap
    - id: P5CRx
    - name: pyrroline-5-carboxylate reductase(nadh)
    - metabolites: !!omap
      - h_c: -2.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - pro__L_c: 1.0
      - pyr5carb_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16445 or CLOINNGCF_022845735_19200
    - annotation: !!omap
      - biggr: P5CRx
      - rhea: RHEA:14105
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__P9DH
    - name: ''
    - metabolites: !!omap
      - h_c: 4.0
      - mql8_c: 1.0
      - mqn8_c: -1.0
      - ppp9_c: 1.0
      - pppg9_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15800
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__P9DH
      - sbo: SBO:0000176
  - !!omap
    - id: PA160abcpp
    - name: phosphatidate transport via ABC system (n-C16:0, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pa160_c: -1.0
      - pa160_p: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00225 or CLOINNGCF_022845735_02670
        or CLOINNGCF_022845735_11230
    - annotation: !!omap
      - biggr: PA160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PALDH
    - name: Phosphonoacetaldehyde hydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__Pald_c: -1.0
      - acald_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04270
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PALDH
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PANO
    - name: ''
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 2.0
      - mthgxl_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PANO
      - rhea: RHEA:52004
      - sbo: SBO:0000176
  - !!omap
    - id: PANTS
    - name: pantothenate synthase
    - metabolites: !!omap
      - ala_B_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pant__R_c: -1.0
      - pnto__R_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: PANTS
      - rhea: RHEA:10912
      - sbo: SBO:0000176
  - !!omap
    - id: PAPA160pp
    - name: Phosphatidate phosphatase (periplasmic, n-C16:0)
    - metabolites: !!omap
      - 12dgr160_p: 1.0
      - h2o_p: -1.0
      - pa160_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: PAPA160pp
      - rhea: RHEA:43236
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PAPPT3
    - name: Phospho-N-acetylmuramoyl-pentapeptide-transferase 
        (meso-2,6-diaminopimelate)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uagmda_c: 1.0
      - __iPKB_Clostridiaceae__udcpp_c: -1.0
      - ugmda_c: -1.0
      - ump_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15710
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PAPPT3
      - sbo: SBO:0000176
  - !!omap
    - id: PC
    - name: pyruvate carboxylase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2co3_c:-1: -1.0
      - h_c: 1.0
      - oaa_c: 1.0
      - pi_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13765
    - annotation: !!omap
      - biggr: PC
      - rhea: RHEA:20844
      - sbo: SBO:0000176
  - !!omap
    - id: PDE1
    - name: 3',5'-cyclic-nucleotide phosphodiesterase
    - metabolites: !!omap
      - amp_c: 1.0
      - camp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16595 or CLOINNGCF_022845735_23605
    - annotation: !!omap
      - biggr: PDE1
      - rhea: RHEA:25277
      - sbo: SBO:0000176
  - !!omap
    - id: PDE4
    - name: 3',5'-cyclic-nucleotide phosphodiesterase
    - metabolites: !!omap
      - 35cgmp_c: -1.0
      - gmp_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09185 or CLOINNGCF_022845735_15265
        or CLOINNGCF_022845735_16590 or CLOINNGCF_022845735_16595 or 
        CLOINNGCF_022845735_23605
    - annotation: !!omap
      - biggr: PDE4
      - rhea: RHEA:16957
      - sbo: SBO:0000176
  - !!omap
    - id: PEPA
    - name: MNXR86162
    - metabolites: !!omap
      - h2o_c: 1.0
      - malt6p_c: 1.0
      - malt_c: -1.0
      - pi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08570
    - annotation: !!omap
      - biggr: PEPA
      - rhea: RHEA:36295
      - sbo: SBO:0000176
  - !!omap
    - id: PERD
    - name: Erythronate 4-phosphate (4per) dehydrogenase
    - metabolites: !!omap
      - 4per_c: -1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - ohpb_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03385
    - annotation: !!omap
      - biggr: PERD
      - rhea: RHEA:18829
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PFK
    - name: Phosphofructokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - f6p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195 or CLOINNGCF_022845735_10615
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PFK
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PFK_2
    - name: Phosphofructokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: -1.0
      - __iPKB_Clostridiaceae__tagdp__D_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10615 or CLOINNGCF_022845735_19130
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PFK_2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PFK_3
    - name: Phosphofructokinase (s7p)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__s17bp_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - s7p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195 or CLOINNGCF_022845735_10615
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PFK_3
      - sbo: SBO:0000176
  - !!omap
    - id: PFL
    - name: pyruvate formate lyase
    - metabolites: !!omap
      - accoa_c: 1.0
      - coa_c: -1.0
      - for_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14510 or CLOINNGCF_022845735_14515
        or CLOINNGCF_022845735_16450 or (CLOINNGCF_022845735_00710 and 
        CLOINNGCF_022845735_05420) or (CLOINNGCF_022845735_00710 and 
        CLOINNGCF_022845735_05540) or (CLOINNGCF_022845735_00715 and 
        CLOINNGCF_022845735_05425) or (CLOINNGCF_022845735_15230 and 
        CLOINNGCF_022845735_15235)
    - annotation: !!omap
      - biggr: PFL
      - rhea: RHEA:11844
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PG160abcpp
    - name: Phosphatidylglycerol transport via ABC system (n-C16:0, periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pg160_c: -1.0
      - __iPKB_Clostridiaceae__pg160_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00225 or CLOINNGCF_022845735_02670
        or CLOINNGCF_022845735_11230
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PG160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PGAMT
    - name: phosphoglucosamine mutase
    - metabolites: !!omap
      - gam1p_c: -1.0
      - gam6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18745
    - annotation: !!omap
      - biggr: PGAMT
      - sbo: SBO:0000176
  - !!omap
    - id: PGCD
    - name: phosphoglycerate dehydrogenase
    - metabolites: !!omap
      - 3pg_c: -1.0
      - 3php_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01250 or CLOINNGCF_022845735_03385
        or CLOINNGCF_022845735_05680 or CLOINNGCF_022845735_18790 or 
        CLOINNGCF_022845735_22775 or (CLOINNGCF_022845735_03385 and 
        CLOINNGCF_022845735_22045)
    - annotation: !!omap
      - biggr: PGCD
      - rhea: RHEA:12641
      - sbo: SBO:0000176
  - !!omap
    - id: PGI
    - name: glucose-6-phosphate isomerase
    - metabolites: !!omap
      - f6p_c: 1.0
      - g6p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09715 or CLOINNGCF_022845735_20080
    - annotation: !!omap
      - biggr: PGI
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PGI1c
    - name: Glucose-6-phosphateisomerase,glycosome
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g6p_A_c: -1.0
      - f6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09715
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PGI1c
      - sbo: SBO:0000176
  - !!omap
    - id: PGK
    - name: phosphoglycerate kinase
    - metabolites: !!omap
      - 13dpg_c: 1.0
      - 3pg_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03490
    - annotation: !!omap
      - biggr: PGK
      - rhea: RHEA:14801
      - sbo: SBO:0000176
  - !!omap
    - id: PGL
    - name: 6-phosphogluconolactonase
    - metabolites: !!omap
      - 6pgc_c: 1.0
      - 6pgl_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07720 or CLOINNGCF_022845735_17120
    - annotation: !!omap
      - biggr: PGL
      - rhea: RHEA:12556
      - sbo: SBO:0000176
  - !!omap
    - id: PGLYCP
    - name: Phosphoglycolate phosphatase
    - metabolites: !!omap
      - 2pglyc_c: -1.0
      - glyclt_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05955 or CLOINNGCF_022845735_06700
        or CLOINNGCF_022845735_21795
    - annotation: !!omap
      - biggr: PGLYCP
      - rhea: RHEA:14369
      - sbo: SBO:0000176
  - !!omap
    - id: PGLYCP:2
    - name: Phosphoglycolate phosphatase
    - metabolites: !!omap
      - 2pglyc_c: -1.0
      - glyclt_c: 1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05825 or CLOINNGCF_022845735_21580
    - annotation: !!omap
      - biggr: PGLYCP
      - rhea: RHEA:14369
      - sbo: SBO:0000176
  - !!omap
    - id: PGM
    - name: phosphoglycerate mutase
    - metabolites: !!omap
      - 2pg_c: -1.0
      - 3pg_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02070 or CLOINNGCF_022845735_06005
        or CLOINNGCF_022845735_09935 or CLOINNGCF_022845735_24190
    - annotation: !!omap
      - biggr: PGM
      - rhea: RHEA:15901
      - sbo: SBO:0000176
  - !!omap
    - id: PGMT
    - name: phosphoglucomutase
    - metabolites: !!omap
      - g1p_c: -1.0
      - g6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430 or CLOINNGCF_022845735_18745
        or CLOINNGCF_022845735_23425 or CLOINNGCF_022845735_24800
    - annotation: !!omap
      - biggr: PGMT
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PGMT_2
    - name: ''
    - metabolites: !!omap
      - g1p_B_c: -1.0
      - g6p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15025
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PGMT_2
      - sbo: SBO:0000176
  - !!omap
    - id: PGMT_B
    - name: R_b_phosphoglucomutase
    - metabolites: !!omap
      - g1p_B_c: 1.0
      - g6p_B_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24800
    - annotation: !!omap
      - biggr: PGMT_B
      - rhea: RHEA:20113
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PGP160abcpp
    - name: Phosphatidylglycerophosphate transport via ABC system (n-C16:0, 
        periplasm)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pgp160_c: -1.0
      - __iPKB_Clostridiaceae__pgp160_p: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00225 or CLOINNGCF_022845735_02670
        or CLOINNGCF_022845735_11230
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PGP160abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PGPP160pp
    - name: Phosphatidylglycerol phosphate phosphatase (periplasm, n-C16:0)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pg160_p: 1.0
      - __iPKB_Clostridiaceae__pgp160_p: -1.0
      - h2o_p: -1.0
      - pi_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PGPP160pp
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PGSA160
    - name: Phosphatidylglycerol synthase (n-C16:0)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pgp160_c: 1.0
      - cdpdhdecg_c: -1.0
      - cmp_c: 1.0
      - glyc3p_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_20195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PGSA160
      - sbo: SBO:0000176
  - !!omap
    - id: PHEMEt
    - name: heme transport
    - metabolites: !!omap
      - pheme_c: 1.0
      - pheme_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05755
    - annotation: !!omap
      - biggr: PHEMEt
      - sbo: SBO:0000655
  - !!omap
    - id: PHETA1
    - name: phenylalanine transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - glu__L_c: 1.0
      - phe__L_c: -1.0
      - phpyr_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02115 or CLOINNGCF_022845735_06895
        or CLOINNGCF_022845735_06905 or CLOINNGCF_022845735_11340
    - annotation: !!omap
      - biggr: PHETA1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PHEabc
    - name: ''
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - phe__L_c: 1.0
      - phe__L_e: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PHEabc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PHHL
    - name: ''
    - metabolites: !!omap
      - ac_c: 1.0
      - h2o_c: -1.0
      - h_c: 3.0
      - pi_c: 1.0
      - ppac_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PHHL
      - rhea: RHEA:16749
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PHHL2
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__Pald_c: -1.0
      - h2o_c: -1.0
      - h_c: -1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - ppac_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09205
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PHHL2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PHNO
    - name: ''
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 3.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - pi_c: 1.0
      - ppt_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16780 or CLOINNGCF_022845735_16785
        or CLOINNGCF_022845735_16795
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PHNO
      - sbo: SBO:0000176
  - !!omap
    - id: PIabc
    - name: phosphate transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 2.0
      - pi_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03215 or CLOINNGCF_022845735_06055
        or CLOINNGCF_022845735_12995 or CLOINNGCF_022845735_13000 or 
        CLOINNGCF_022845735_13005 or CLOINNGCF_022845735_23610 or 
        (CLOINNGCF_022845735_12995 and CLOINNGCF_022845735_13010)
    - annotation: !!omap
      - biggr: PIabc
      - sbo: SBO:0000655
  - !!omap
    - id: PIuabcpp
    - name: phosphate transport via ABC system (uptake, periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 2.0
      - pi_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06055
    - annotation: !!omap
      - biggr: PIuabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PLPS
    - name: Pyridoxal-5-phosphate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: -1.0
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: 3.0
      - h_c: 1.0
      - pi_c: 1.0
      - pydx5p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PLPS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PMANM
    - name: Phosphomannomutase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__man1p_c: -1.0
      - __iPKB_Clostridiaceae__man6p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21940
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PMANM
      - sbo: SBO:0000176
  - !!omap
    - id: PMDPHT
    - name: pyrimidine phosphatase
    - metabolites: !!omap
      - 4r5au_c: 1.0
      - 5aprbu_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19990
    - annotation: !!omap
      - biggr: PMDPHT
      - rhea: RHEA:25197
      - sbo: SBO:0000176
  - !!omap
    - id: PMPK
    - name: phosphomethylpyrimidine kinase
    - metabolites: !!omap
      - 2mahmp_c: 1.0
      - 4ampm_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04515 or CLOINNGCF_022845735_18390
    - annotation: !!omap
      - biggr: PMPK
      - rhea: RHEA:19893
      - sbo: SBO:0000176
  - !!omap
    - id: PNP
    - name: R_purine_nucleoside_phosphorylase
    - metabolites: !!omap
      - h_c: 1.0
      - ncam_c: 1.0
      - pi_c: -1.0
      - r1p_c: 1.0
      - rnam_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PNP
      - sbo: SBO:0000176
  - !!omap
    - id: PNP:2
    - name: R_purine_nucleoside_phosphorylase
    - metabolites: !!omap
      - h_c: 1.0
      - ncam_c: 1.0
      - pi_c: -1.0
      - r1p_c: 1.0
      - rnam_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PNP
      - sbo: SBO:0000176
  - !!omap
    - id: PNTK
    - name: pantothenate kinase
    - metabolites: !!omap
      - 4ppan_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pnto__R_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16915 or CLOINNGCF_022845735_23985
    - annotation: !!omap
      - biggr: PNTK
      - rhea: RHEA:16373
      - sbo: SBO:0000176
  - !!omap
    - id: POR_syn
    - name: Pyruvate-ferredoxin oxidoreductase
    - metabolites: !!omap
      - accoa_c: 1.0
      - co2_c: 1.0
      - coa_c: -1.0
      - fdxox_c: -2.0
      - fdxrd_c: 2.0
      - h_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07850
    - annotation: !!omap
      - biggr: POR_syn
      - rhea: RHEA:12765
      - sbo: SBO:0000176
  - !!omap
    - id: IDPh_1
    - name: inorganic diphosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 2.0
      - ppi_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07005 or CLOINNGCF_022845735_07880
    - annotation: !!omap
      - biggr: IDPh_1
      - rhea: RHEA:24576
      - sbo: SBO:0000176
  - !!omap
    - id: PPAKr
    - name: Propionate kinase
    - metabolites: !!omap
      - adp_c: -1.0
      - atp_c: 1.0
      - ppap_c: -1.0
      - prpnte_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13505
    - annotation: !!omap
      - biggr: PPAKr
      - rhea: RHEA:23148
      - sbo: SBO:0000176
  - !!omap
    - id: PPAP_Et
    - name: Propanoyl phosphate transport (transport mechanism unknown - 
        evidence from biolog data)
    - metabolites: !!omap
      - ppap_c: 1.0
      - ppap_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: PPAP_Et
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PPATabc
    - name: ''
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ppt_c: 1.0
      - ppt_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16760 or CLOINNGCF_022845735_16775
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPATabc
      - sbo: SBO:0000655
  - !!omap
    - id: PPBNGS
    - name: porphobilinogen synthase
    - metabolites: !!omap
      - 5aop_c: -2.0
      - h2o_c: 2.0
      - h_c: 1.0
      - ppbng_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11670
    - annotation: !!omap
      - biggr: PPBNGS
      - rhea: RHEA:24064
      - sbo: SBO:0000176
  - !!omap
    - id: PPCDC
    - name: phosphopantothenoylcysteine decarboxylase
    - metabolites: !!omap
      - 4ppcys_c: -1.0
      - co2_c: 1.0
      - h_c: -1.0
      - pan4p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16910
    - annotation: !!omap
      - biggr: PPCDC
      - rhea: RHEA:16793
      - sbo: SBO:0000176
  - !!omap
    - id: PPDD
    - name: Propanediol dehydratase
    - metabolites: !!omap
      - 12ppd__S_c: -1.0
      - h2o_c: 1.0
      - ppal_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: PPDD
      - sbo: SBO:0000176
  - !!omap
    - id: PPDK
    - name: Pyruvate,phosphate dikinase.
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pep_c: 1.0
      - pi_c: -1.0
      - ppi_c: 1.0
      - pyr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09740
    - annotation: !!omap
      - biggr: PPDK
      - rhea: RHEA:10756
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PPGPPDP
    - name: Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ppgpp_c: -1.0
      - gdp_c: 1.0
      - h2o_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13375
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPGPPDP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PPGPPDPE
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pppgpp_c: -1.0
      - gtp_c: 1.0
      - h2o_c: -1.0
      - h_c: 7.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13375
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPGPPDPE
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PPM
    - name: Phosphopentomutase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: 1.0
      - r1p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16055
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPM
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PPM2
    - name: Phosphopentomutase 2 (deoxyribose)
    - metabolites: !!omap
      - 2dr5p_c: 1.0
      - __iPKB_Clostridiaceae__2dr1p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16055
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPM2
      - sbo: SBO:0000176
  - !!omap
    - id: PPNCL
    - name: phosphopantothenate-cysteine ligase
    - metabolites: !!omap
      - 4ppan_c: -1.0
      - 4ppcys_c: 1.0
      - cdp_c: 1.0
      - ctp_c: -1.0
      - cys__L_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16910
    - annotation: !!omap
      - biggr: PPNCL
      - sbo: SBO:0000176
  - !!omap
    - id: PPNCL2_1
    - name: phosphopantothenate-cysteine ligase
    - metabolites: !!omap
      - 4ppan_c: -1.0
      - 4ppcys_c: 1.0
      - cmp_c: 1.0
      - ctp_c: -1.0
      - cys__L_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16910
    - annotation: !!omap
      - biggr: PPNCL2_1
      - rhea: RHEA:19397
      - sbo: SBO:0000176
  - !!omap
    - id: PPNCL3
    - name: phosphopantothenate-cysteine ligase
    - metabolites: !!omap
      - 4ppan_c: -1.0
      - 4ppcys_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - cys__L_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16910
    - annotation: !!omap
      - biggr: PPNCL3
      - rhea: RHEA:25156
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PPND
    - name: Prephenate dehydrogenase
    - metabolites: !!omap
      - 34hpp_c: 1.0
      - __iPKB_Clostridiaceae__pphn_c: -1.0
      - co2_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00560
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPND
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PPNDH
    - name: Prephenate dehydratase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__pphn_c: -1.0
      - co2_c: 1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - phpyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00585
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PPNDH
      - sbo: SBO:0000176
  - !!omap
    - id: PPPGO
    - name: protoporphyrinogen oxidase (aerobic)
    - metabolites: !!omap
      - h2o_c: 3.0
      - o2_c: -1.5
      - ppp9_c: 1.0
      - pppg9_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22830
    - annotation: !!omap
      - biggr: PPPGO
      - sbo: SBO:0000176
  - !!omap
    - id: PRAGSr
    - name: phosphoribosylglycinamide synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gar_c: 1.0
      - gly_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - pram_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23535
    - annotation: !!omap
      - biggr: PRAGSr
      - rhea: RHEA:17453
      - sbo: SBO:0000176
  - !!omap
    - id: PRAGSr:2
    - name: phosphoribosylglycinamide synthase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - gar_c: 1.0
      - gly_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - pram_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23535
    - annotation: !!omap
      - biggr: PRAGSr
      - rhea: RHEA:17453
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PRAIS_1
    - name: Phosphoribosylaminoimidazole synthetase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__air_c: 1.0
      - __iPKB_Clostridiaceae__fpram_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00620
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PRAIS_1
      - sbo: SBO:0000176
  - !!omap
    - id: PRAIi
    - name: phosphoribosylanthranilate isomerase (irreversible)
    - metabolites: !!omap
      - 2cpr5p_c: 1.0
      - pran_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21175
    - annotation: !!omap
      - biggr: PRAIi
      - rhea: RHEA:21540
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PRAMPC
    - name: Phosphoribosyl-AMP cyclohydrolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__prbamp_c: -1.0
      - h2o_c: -1.0
      - prfp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06920 or CLOINNGCF_022845735_06925
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PRAMPC
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PRASCSi
    - name: Phosphoribosylaminoimidazolesuccinocarboxamide synthase
    - metabolites: !!omap
      - 25aics_c: 1.0
      - __iPKB_Clostridiaceae__5aizc_c: -1.0
      - adp_c: 1.0
      - asp__L_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12750
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PRASCSi
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PRATPP
    - name: Phosphoribosyl-ATP pyrophosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__prbamp_c: 1.0
      - __iPKB_Clostridiaceae__prbatp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06925
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PRATPP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PRFGS
    - name: Phosphoribosylformylglycinamidine synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fgam_c: -1.0
      - __iPKB_Clostridiaceae__fpram_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - gln__L_c: -1.0
      - glu__L_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00610
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PRFGS
      - sbo: SBO:0000176
  - !!omap
    - id: PRMICI
    - name: 
        1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide
        isomerase
    - metabolites: !!omap
      - prfp_c: -1.0
      - prlp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06910
    - annotation: !!omap
      - biggr: PRMICI
      - rhea: RHEA:15469
      - sbo: SBO:0000176
  - !!omap
    - id: PROGLYabcpp
    - name: L-Prolinylglycine (Pro-Gly) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - progly_c: 1.0
      - progly_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06200 or CLOINNGCF_022845735_06205
        or (CLOINNGCF_022845735_06200 and CLOINNGCF_022845735_06205)
    - annotation: !!omap
      - biggr: PROGLYabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: PROGLYtex
    - name: L-Prolinylglycine transport via diffusion (extracellular to 
        periplasm)
    - metabolites: !!omap
      - progly_e: -1.0
      - progly_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: PROGLYtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PROHISGLUtr
    - name: Tripeptide Opp3 transport
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__prohisglu_c: 1.0
      - __iPKB_Clostridiaceae__prohisglu_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03620
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PROHISGLUtr
      - sbo: SBO:0000655
  - !!omap
    - id: PROabc
    - name: L-proline transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - pro__L_c: 1.0
      - pro__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_22910 and 
        CLOINNGCF_022845735_24260) or (CLOINNGCF_022845735_24255 and 
        CLOINNGCF_022845735_24265)
    - annotation: !!omap
      - biggr: PROabc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PRPPS
    - name: Phosphoribosylpyrophosphate synthetase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - prpp_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00870
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PRPPS
      - sbo: SBO:0000176
  - !!omap
    - id: PSCVT
    - name: 3-phosphoshikimate 1-carboxyvinyltransferase
    - metabolites: !!omap
      - 3psme_c: 1.0
      - pep_c: -1.0
      - pi_c: 1.0
      - skm5p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00565
    - annotation: !!omap
      - biggr: PSCVT
      - rhea: RHEA:21256
      - sbo: SBO:0000176
  - !!omap
    - id: PSERT
    - name: phosphoserine transaminase
    - metabolites: !!omap
      - 3php_c: -1.0
      - akg_c: 1.0
      - glu__L_c: -1.0
      - pser_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18795
    - annotation: !!omap
      - biggr: PSERT
      - rhea: RHEA:14329
      - sbo: SBO:0000176
  - !!omap
    - id: PSP_L
    - name: phosphoserine phosphatase (L-serine)
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - pser_c: -1.0
      - ser__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07610
    - annotation: !!omap
      - biggr: PSP_L
      - rhea: RHEA:21208
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PSUDS
    - name: Pseudouridylate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - h2o_c: 1.0
      - psd5p_c: 1.0
      - ura_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16040
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PSUDS
      - sbo: SBO:0000176
  - !!omap
    - id: PTA2
    - name: Phosphate acetyltransferase
    - metabolites: !!omap
      - coa_c: 1.0
      - pi_c: -1.0
      - ppap_c: 1.0
      - ppcoa_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02635
    - annotation: !!omap
      - biggr: PTA2
      - rhea: RHEA:28046
      - sbo: SBO:0000176
  - !!omap
    - id: PTAr
    - name: phosphotransacetylase
    - metabolites: !!omap
      - accoa_c: -1.0
      - actp_c: 1.0
      - coa_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02635
    - annotation: !!omap
      - biggr: PTAr
      - rhea: RHEA:19521
      - sbo: SBO:0000176
  - !!omap
    - id: PTHRP
    - name: Phospho-threonine phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - thr__L_c: 1.0
      - thrp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09490
    - annotation: !!omap
      - biggr: PTHRP
      - rhea: RHEA:30579
      - sbo: SBO:0000176
  - !!omap
    - id: PTPATi:2
    - name: pantetheine-phosphate adenylyltransferase
    - metabolites: !!omap
      - atp_c: -1.0
      - dpcoa_c: 1.0
      - h_c: -1.0
      - pan4p_c: -1.0
      - ppi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11560
    - annotation: !!omap
      - biggr: PTPATi
      - rhea: RHEA:19801
      - sbo: SBO:0000176
  - !!omap
    - id: PTRCabc
    - name: putrescine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ptrc_c: 1.0
      - ptrc_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04260 or CLOINNGCF_022845735_09070
        or (CLOINNGCF_022845735_04160 and CLOINNGCF_022845735_15540) or 
        (CLOINNGCF_022845735_04260 and CLOINNGCF_022845735_15540) or 
        (CLOINNGCF_022845735_15540 and CLOINNGCF_022845735_15545 and 
        CLOINNGCF_022845735_15550)
    - annotation: !!omap
      - biggr: PTRCabc
      - sbo: SBO:0000655
  - !!omap
    - id: PUNP1
    - name: purine-nucleoside phosphorylase (Adenosine)
    - metabolites: !!omap
      - ade_c: 1.0
      - adn_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
        or CLOINNGCF_022845735_21950
    - annotation: !!omap
      - biggr: PUNP1
      - rhea: RHEA:27642
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP1:2
    - name: purine-nucleoside phosphorylase (Adenosine)
    - metabolites: !!omap
      - ade_c: 1.0
      - adn_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP1
      - rhea: RHEA:27642
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PUNP2
    - name: Purine-nucleoside phosphorylase (Deoxyadenosine)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - ade_c: 1.0
      - dad_2_c: -1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PUNP2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PUNP2:2
    - name: Purine-nucleoside phosphorylase (Deoxyadenosine)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - ade_c: 1.0
      - dad_2_c: -1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PUNP2
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP3
    - name: purine-nucleoside phosphorylase (Guanosine)
    - metabolites: !!omap
      - gsn_c: -1.0
      - gua_c: 1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP3
      - rhea: RHEA:13233
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP3:2
    - name: purine-nucleoside phosphorylase (Guanosine)
    - metabolites: !!omap
      - gsn_c: -1.0
      - gua_c: 1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP3
      - rhea: RHEA:13233
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PUNP4
    - name: Purine-nucleoside phosphorylase (Deoxyguanosine)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - dgsn_c: -1.0
      - gua_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PUNP4
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PUNP4:2
    - name: Purine-nucleoside phosphorylase (Deoxyguanosine)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - dgsn_c: -1.0
      - gua_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PUNP4
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP5
    - name: purine-nucleoside phosphorylase (Inosine)
    - metabolites: !!omap
      - hxan_c: 1.0
      - ins_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP5
      - rhea: RHEA:27646
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP5:2
    - name: purine-nucleoside phosphorylase (Inosine)
    - metabolites: !!omap
      - hxan_c: 1.0
      - ins_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP5
      - rhea: RHEA:27646
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PUNP6
    - name: Purine-nucleoside phosphorylase (Deoxyinosine)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - din_c: -1.0
      - hxan_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PUNP6
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__PUNP6:2
    - name: Purine-nucleoside phosphorylase (Deoxyinosine)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - din_c: -1.0
      - hxan_c: 1.0
      - pi_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PUNP6
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP7
    - name: purine-nucleoside phosphorylase (Xanthosine)
    - metabolites: !!omap
      - pi_c: -1.0
      - r1p_c: 1.0
      - xan_c: 1.0
      - xtsn_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06855 or CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP7
      - sbo: SBO:0000176
  - !!omap
    - id: PUNP7:2
    - name: purine-nucleoside phosphorylase (Xanthosine)
    - metabolites: !!omap
      - pi_c: -1.0
      - r1p_c: 1.0
      - xan_c: 1.0
      - xtsn_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16060
    - annotation: !!omap
      - biggr: PUNP7
      - sbo: SBO:0000176
  - !!omap
    - id: PYK
    - name: pyruvate kinase
    - metabolites: !!omap
      - adp_c: -1.0
      - atp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620 or CLOINNGCF_022845735_12475
    - annotation: !!omap
      - biggr: PYK
      - rhea: RHEA:18157
      - sbo: SBO:0000176
  - !!omap
    - id: PYK2
    - name: Pyruvate Kinase (Anaerobic, UTP forming)
    - metabolites: !!omap
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
      - udp_c: -1.0
      - utp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620
    - annotation: !!omap
      - biggr: PYK2
      - rhea: RHEA:56948
      - sbo: SBO:0000176
  - !!omap
    - id: PYK3
    - name: Pyruvate Kinase (Anaerobic, GTP forming)
    - metabolites: !!omap
      - gdp_c: -1.0
      - gtp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620
    - annotation: !!omap
      - biggr: PYK3
      - rhea: RHEA:30295
      - sbo: SBO:0000176
  - !!omap
    - id: PYK4
    - name: Pyruvate Kinase (Anaerobic, CTP forming)
    - metabolites: !!omap
      - cdp_c: -1.0
      - ctp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620
    - annotation: !!omap
      - biggr: PYK4
      - rhea: RHEA:56952
      - sbo: SBO:0000176
  - !!omap
    - id: PYK5
    - name: pyruvate kinase(5)
    - metabolites: !!omap
      - h_c: -1.0
      - idp_c: -1.0
      - itp_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620
    - annotation: !!omap
      - biggr: PYK5
      - rhea: RHEA:56956
      - sbo: SBO:0000176
  - !!omap
    - id: PYNP1
    - name: pyrimidine-nucleoside phosphorylase (cytosine)
    - metabolites: !!omap
      - csn_c: -1.0
      - cytd_c: 1.0
      - pi_c: 1.0
      - r1p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12390
    - annotation: !!omap
      - biggr: PYNP1
      - rhea: RHEA:52540
      - sbo: SBO:0000176
  - !!omap
    - id: PYNP1:2
    - name: pyrimidine-nucleoside phosphorylase (cytosine)
    - metabolites: !!omap
      - csn_c: 1.0
      - cytd_c: -1.0
      - pi_c: -1.0
      - r1p_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12390
    - annotation: !!omap
      - biggr: PYNP1
      - rhea: RHEA:52540
      - sbo: SBO:0000176
  - !!omap
    - id: PYNP2r
    - name: pyrimidine-nucleoside phosphorylase (uracil)
    - metabolites: !!omap
      - pi_c: -1.0
      - r1p_c: 1.0
      - ura_c: 1.0
      - uri_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12390 or CLOINNGCF_022845735_14525
    - annotation: !!omap
      - biggr: PYNP2r
      - rhea: RHEA:24388
      - sbo: SBO:0000176
  - !!omap
    - id: PYNP2r:2
    - name: pyrimidine-nucleoside phosphorylase (uracil)
    - metabolites: !!omap
      - pi_c: -1.0
      - r1p_c: 1.0
      - ura_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12390
    - annotation: !!omap
      - biggr: PYNP2r
      - rhea: RHEA:24388
      - sbo: SBO:0000176
  - !!omap
    - id: QMO3
    - name: quinol monooxygenase (menaquinol 8)
    - metabolites: !!omap
      - h_c: 2.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - o2_c: -2.0
      - o2s_c: 2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: QMO3
      - rhea: RHEA:29183
      - sbo: SBO:0000176
  - !!omap
    - id: QULNS_1
    - name: quinolinate synthase
    - metabolites: !!omap
      - dhap_c: -1.0
      - h2o_c: 2.0
      - iasp_c: -1.0
      - pi_c: 1.0
      - quln_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01100
    - annotation: !!omap
      - biggr: QULNS_1:2
      - rhea: RHEA:25888
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__R5PP
    - name: Ribose 5-phosphate phosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - h2o_c: -1.0
      - pi_c: 1.0
      - rib__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02430 or CLOINNGCF_022845735_04510
        or CLOINNGCF_022845735_07735 or CLOINNGCF_022845735_10750
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__R5PP
      - sbo: SBO:0000176
  - !!omap
    - id: RAFFINt2
    - name: R_Raffinose_transport_in_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - raffin_c: 1.0
      - raffin_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: RAFFINt2
      - sbo: SBO:0000655
  - !!omap
    - id: RAFH
    - name: raffinose hydrolyzing enzyme
    - metabolites: !!omap
      - fru_c: 1.0
      - h2o_c: -1.0
      - melib_c: 1.0
      - raffin_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19050
    - annotation: !!omap
      - biggr: RAFH
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RBFK
    - name: Riboflavin kinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ribflv_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - fmn_c: 1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12630
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RBFK
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RBFSa
    - name: Riboflavin synthase
    - metabolites: !!omap
      - 4r5au_c: -1.0
      - __iPKB_Clostridiaceae__db4p_c: -1.0
      - __iPKB_Clostridiaceae__dmlz_c: 1.0
      - h2o_c: 2.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05215 or CLOINNGCF_022845735_05225
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RBFSa
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RBFSb
    - name: Riboflavin synthase
    - metabolites: !!omap
      - 4r5au_c: 1.0
      - __iPKB_Clostridiaceae__dmlz_c: -2.0
      - __iPKB_Clostridiaceae__ribflv_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05225
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RBFSb
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RBK
    - name: Ribokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - rib__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02620 or CLOINNGCF_022845735_14680
        or CLOINNGCF_022845735_21760
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RBK
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RBK:2
    - name: Ribokinase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: 1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - rib__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02620
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RBK
      - sbo: SBO:0000176
  - !!omap
    - id: RBP4E
    - name: L-ribulose-phosphate 4-epimerase
    - metabolites: !!omap
      - ru5p__L_c: -1.0
      - xu5p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02955 or CLOINNGCF_022845735_05725
        or CLOINNGCF_022845735_24970
    - annotation: !!omap
      - biggr: RBP4E
      - rhea: RHEA:22368
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RECOAH26
    - name: 3 hydroxyacyl Coa dehydratase   R  3 hydroxy  4Z  decenyl CoA
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R3hdec4coa_c: -1.0
      - __iPKB_Clostridiaceae__dec4_2_coa_c: 1.0
      - h2o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RECOAH26
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RHA101tex
    - name: R 3 Hydroxy acid transport diffusion C101  extracellular to 
        periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R3hdec4e_e: 1.0
      - __iPKB_Clostridiaceae__R3hdec4e_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RHA101tex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__RHA101tpp
    - name: R 3 Hydroxy acid transport diffusion C101   periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R3hdec4e_c: 1.0
      - __iPKB_Clostridiaceae__R3hdec4e_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RHA101tpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__RHA120tex
    - name: R 3 Hydroxy acid transport diffusion C120  extracellular to 
        periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R_3hdda_e: 1.0
      - __iPKB_Clostridiaceae__R_3hdda_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RHA120tex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__RHA120tpp
    - name: R 3 Hydroxy acid transport diffusion C120   periplasm
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__R_3hdda_c: 1.0
      - __iPKB_Clostridiaceae__R_3hdda_p: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RHA120tpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__RHACOAE120
    - name: R hydroxy acyl CoA thioesterase  C120
    - metabolites: !!omap
      - R_3hddcoa_c: -1.0
      - __iPKB_Clostridiaceae__R_3hdda_c: 1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RHACOAE120
      - sbo: SBO:0000176
  - !!omap
    - id: RHACOAR120
    - name: R__R__Hydroxyacyl_CoANADP_oxidoreductase
    - metabolites: !!omap
      - 3oddcoa_c: -1.0
      - R_3hddcoa_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: RHACOAR120
      - rhea: RHEA:45848
      - sbo: SBO:0000176
  - !!omap
    - id: RHCCE
    - name: S-ribosylhomocysteine cleavage enzyme
    - metabolites: !!omap
      - dhptd_c: 1.0
      - hcys__L_c: 1.0
      - rhcys_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_23720
    - annotation: !!omap
      - biggr: RHCCE
      - rhea: RHEA:17753
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RIBFLVt2
    - name: Riboflavin transport in via proton symport
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ribflv_c: 1.0
      - __iPKB_Clostridiaceae__ribflv_e: -1.0
      - h_c: 1.0
      - h_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15620 or 
        (CLOINNGCF_022845735_04215 and CLOINNGCF_022845735_04220 and 
        CLOINNGCF_022845735_04225)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RIBFLVt2
      - sbo: SBO:0000655
  - !!omap
    - id: RIBabc
    - name: D-ribose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - rib__D_c: 1.0
      - rib__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00815 or CLOINNGCF_022845735_11935
        or CLOINNGCF_022845735_11940 or CLOINNGCF_022845735_18830 or 
        (CLOINNGCF_022845735_05600 and CLOINNGCF_022845735_11935) or 
        (CLOINNGCF_022845735_05600 and CLOINNGCF_022845735_11935 and 
        CLOINNGCF_022845735_11945) or (CLOINNGCF_022845735_05615 and 
        CLOINNGCF_022845735_18305 and CLOINNGCF_022845735_18310)
    - annotation: !!omap
      - biggr: RIBabc
      - sbo: SBO:0000655
  - !!omap
    - id: RIBabc1
    - name: R_D_ribose_transport_out_via_ABC_system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - rib__D_c: -1.0
      - rib__D_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05600 and 
        CLOINNGCF_022845735_11935
    - annotation: !!omap
      - biggr: RIBabc1
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__RNDR1
    - name: Ribonucleoside-diphosphate reductase (ADP)
    - metabolites: !!omap
      - adp_c: -1.0
      - dadp_c: 1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04340 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_09125 or CLOINNGCF_022845735_12290 or 
        CLOINNGCF_022845735_18545 or CLOINNGCF_022845735_24245 or 
        (CLOINNGCF_022845735_18550 and CLOINNGCF_022845735_18555)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNDR1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNDR2
    - name: Ribonucleoside-diphosphate reductase (GDP)
    - metabolites: !!omap
      - dgdp_c: 1.0
      - gdp_c: -1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04340 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_09125 or CLOINNGCF_022845735_12290 or 
        CLOINNGCF_022845735_18545 or CLOINNGCF_022845735_24245 or 
        (CLOINNGCF_022845735_18550 and CLOINNGCF_022845735_18555)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNDR2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNDR3
    - name: Ribonucleoside-diphosphate reductase (CDP)
    - metabolites: !!omap
      - cdp_c: -1.0
      - dcdp_c: 1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04340 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_09125 or CLOINNGCF_022845735_12290 or 
        CLOINNGCF_022845735_18545 or CLOINNGCF_022845735_24245 or 
        (CLOINNGCF_022845735_18550 and CLOINNGCF_022845735_18555)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNDR3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNDR4
    - name: Ribonucleoside-diphosphate reductase (UDP)
    - metabolites: !!omap
      - dudp_c: 1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
      - udp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04340 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_09125 or CLOINNGCF_022845735_12290 or 
        CLOINNGCF_022845735_18545 or CLOINNGCF_022845735_24245 or 
        (CLOINNGCF_022845735_18550 and CLOINNGCF_022845735_18555)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNDR4
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR1
    - name: Ribonucleoside triphosphate reductase  ATP
    - metabolites: !!omap
      - atp_c: -1.0
      - datp_c: 1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00175 or CLOINNGCF_022845735_09020
        or CLOINNGCF_022845735_12290
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR2
    - name: Ribonucleoside triphosphate reductase  GTP
    - metabolites: !!omap
      - dgtp_c: 1.0
      - gtp_c: -1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00175 or CLOINNGCF_022845735_09020
        or CLOINNGCF_022845735_12290
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR2_2
    - name: ''
    - metabolites: !!omap
      - dgtp_c: 1.0
      - fmn_c: 1.0
      - fmnh2_c: -1.0
      - gtp_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00170
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR2_2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR3
    - name: Ribonucleoside triphosphate reductase  CTP
    - metabolites: !!omap
      - ctp_c: -1.0
      - dctp_c: 1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00175 or CLOINNGCF_022845735_09020
        or CLOINNGCF_022845735_12290
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR3_2
    - name: ''
    - metabolites: !!omap
      - ctp_c: -1.0
      - dctp_c: 1.0
      - fmn_c: 1.0
      - fmnh2_c: -1.0
      - h2o_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00170
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR3_2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR4
    - name: Ribonucleoside triphosphate reductase  UTP
    - metabolites: !!omap
      - dutp_c: 1.0
      - h2o_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00175 or CLOINNGCF_022845735_09020
        or CLOINNGCF_022845735_12290
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR4
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RNTR4_2
    - name: ''
    - metabolites: !!omap
      - dutp_c: 1.0
      - fmn_c: 1.0
      - fmnh2_c: -1.0
      - h2o_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00170
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RNTR4_2
      - sbo: SBO:0000176
  - !!omap
    - id: RPE
    - name: ribulose 5-phosphate 3-epimerase
    - metabolites: !!omap
      - ru5p__D_c: -1.0
      - xu5p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03445 or CLOINNGCF_022845735_09505
        or CLOINNGCF_022845735_22870 or CLOINNGCF_022845735_24970
    - annotation: !!omap
      - biggr: RPE
      - rhea: RHEA:13677
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RPI
    - name: Ribose-5-phosphate isomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - ru5p__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01445 or CLOINNGCF_022845735_04425
        or CLOINNGCF_022845735_17105 or CLOINNGCF_022845735_19535 or 
        CLOINNGCF_022845735_19965
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RPI
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__RU5PS
    - name: Ribulose-5-P Synthetase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__ah6p__D_c: 1.0
      - fald_c: -1.0
      - ru5p__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_04370
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__RU5PS
      - sbo: SBO:0000176
  - !!omap
    - id: 6PHBG
    - name: _6-phospho-beta-glucosidase
    - metabolites: !!omap
      - 2hxmp_c:0: 1.0
      - g6p_c: 1.0
      - h2o_c: -1.0
      - salcn6p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02350 or CLOINNGCF_022845735_09615
        or CLOINNGCF_022845735_19895 or (CLOINNGCF_022845735_09615 and 
        CLOINNGCF_022845735_19895)
    - annotation: !!omap
      - biggr: 6PHBG
      - sbo: SBO:0000176
  - !!omap
    - id: SALCpts
    - name: salicin transport via PEP:Pyr PTS
    - metabolites: !!omap
      - pep_c: -1.0
      - pyr_c: 1.0
      - salcn6p_c: 1.0
      - salcn_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22865 or 
        (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945) or 
        (CLOINNGCF_022845735_04190 and CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: SALCpts
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SAMU3
    - name: ''
    - metabolites: !!omap
      - ahcys_c: 1.0
      - amet_c: -1.0
      - h_c: -7.0
      - pc1_c: 1.0
      - uppg3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11665
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SAMU3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SAOR
    - name: ''
    - metabolites: !!omap
      - actn__S_c: 1.0
      - diact_c: -1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16825
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SAOR
      - rhea: RHEA:27286
      - sbo: SBO:0000176
  - !!omap
    - id: SBTD_D2
    - name: D-sorbitol dehydrogenase (R)
    - metabolites: !!omap
      - fru_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
      - sbt__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01630 or CLOINNGCF_022845735_03345
        or CLOINNGCF_022845735_24735
    - annotation: !!omap
      - biggr: SBTD_D2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SBTPD
    - name: Sorbitol-6-phosphate dehydrogenase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__sbt6p_c: -1.0
      - f6p_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24715
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SBTPD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SBTpts
    - name: D-sorbitol transport via PEP:Pyr PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__sbt6p_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
      - sbt__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02870 or CLOINNGCF_022845735_02900
        or (CLOINNGCF_022845735_06230 and CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SBTpts
      - sbo: SBO:0000655
  - !!omap
    - id: SBTt2
    - name: R_D_sorbitol_transport_in_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - sbt__D_c: 1.0
      - sbt__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: SBTt2
      - sbo: SBO:0000655
  - !!omap
    - id: SDPDS
    - name: succinyl-diaminopimelate desuccinylase
    - metabolites: !!omap
      - 26dap_LL_c: 1.0
      - h2o_c: -1.0
      - sl26da_c: -1.0
      - succ_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02215 or CLOINNGCF_022845735_12280
    - annotation: !!omap
      - biggr: SDPDS
      - rhea: RHEA:22608
      - sbo: SBO:0000176
  - !!omap
    - id: SDPTA
    - name: succinyldiaminopimelate transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - glu__L_c: 1.0
      - sl26da_c: -1.0
      - sl2a6o_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07050 or CLOINNGCF_022845735_13735
    - annotation: !!omap
      - biggr: SDPTA
      - rhea: RHEA:11960
      - sbo: SBO:0000176
  - !!omap
    - id: SELR
    - name: selenate reductase
    - metabolites: !!omap
      - h2o_c: 1.0
      - mql8_c: -1.0
      - mqn8_c: 1.0
      - sel_c: -1.0
      - slnt_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02545
    - annotation: !!omap
      - biggr: SELR
      - rhea: RHEA:34939
      - sbo: SBO:0000176
  - !!omap
    - id: SELTt
    - name: Selenite transport via diffusion
    - metabolites: !!omap
      - slnt_c: 1.0
      - slnt_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: SELTt
      - sbo: SBO:0000655
  - !!omap
    - id: SELabcpp
    - name: selenatenate transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - sel_c: 1.0
      - sel_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03515 or CLOINNGCF_022845735_04260
        or CLOINNGCF_022845735_17015
    - annotation: !!omap
      - biggr: SELabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: SELtex
    - name: selenate transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - sel_e: -1.0
      - sel_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: SELtex
      - sbo: SBO:0000655
  - !!omap
    - id: SELtpp
    - name: selenate transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 2.0
      - h_p: -2.0
      - sel_c: 1.0
      - sel_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03515
    - annotation: !!omap
      - biggr: SELtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SERAT
    - name: serine O-acetyltransferase
    - metabolites: !!omap
      - accoa_c: -1.0
      - acser_c: 1.0
      - coa_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14920 or CLOINNGCF_022845735_22460
    - annotation: !!omap
      - biggr: SERAT
      - rhea: RHEA:24560
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SERDA
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2amac_c: 1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13545
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SERDA
      - sbo: SBO:0000176
  - !!omap
    - id: SERD_L
    - name: L-serine deaminase
    - metabolites: !!omap
      - nh4_c:1: 1.0
      - pyr_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08890 or CLOINNGCF_022845735_10910
        or CLOINNGCF_022845735_13545
    - annotation: !!omap
      - biggr: SERD_L
      - rhea: RHEA:19169
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SERGLUGLNtr
    - name: Tripeptide transport
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__serglugly_c: 1.0
      - __iPKB_Clostridiaceae__serglugly_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03620
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SERGLUGLNtr
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SERR
    - name: Serine racemase
    - metabolites: !!omap
      - ser__D_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15490
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SERR
      - rhea: RHEA:10980
      - sbo: SBO:0000176
  - !!omap
    - id: SERabc
    - name: L-serine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ser__L_c: 1.0
      - ser__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: SERabc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SHCHD2
    - name: Sirohydrochlorin dehydrogenase (NAD)
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dscl_c: -1.0
      - __iPKB_Clostridiaceae__scl_c: 1.0
      - h_c: 1.0
      - nad_c: -1.0
      - nadh_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SHCHD2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SHCHF
    - name: Sirohydrochlorin ferrochelatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__scl_c: -1.0
      - fe2_c: -1.0
      - h_c: 3.0
      - sheme_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SHCHF
      - sbo: SBO:0000176
  - !!omap
    - id: SHK3Dr
    - name: shikimate dehydrogenase
    - metabolites: !!omap
      - 3dhsk_c: -1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - skm_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12485 or CLOINNGCF_022845735_12500
    - annotation: !!omap
      - biggr: SHK3Dr
      - rhea: RHEA:17737
      - sbo: SBO:0000176
  - !!omap
    - id: SHKK
    - name: shikimate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - skm5p_c: 1.0
      - skm_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: SHKK
      - rhea: RHEA:13121
      - sbo: SBO:0000176
  - !!omap
    - id: SHSL1
    - name: O-succinylhomoserine lyase (L-cysteine)
    - metabolites: !!omap
      - cys__L_c: -1.0
      - cyst__L_c: 1.0
      - h_c: 1.0
      - succ_c: 1.0
      - suchms_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13910 or CLOINNGCF_022845735_14800
    - annotation: !!omap
      - biggr: SHSL1
      - rhea: RHEA:20397
      - sbo: SBO:0000176
  - !!omap
    - id: SHSL2
    - name: R_O_succinylhomoserine_lyase__H2S_
    - metabolites: !!omap
      - h2s_c: -1.0
      - h_c: 1.0
      - hcys__L_c: 1.0
      - succ_c: 1.0
      - suchms_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14800
    - annotation: !!omap
      - biggr: SHSL2:2
      - rhea: RHEA:27826
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SLGH
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__lacgth_c: -1.0
      - gthrd_c: 1.0
      - h2o_c: -1.0
      - h_c: 2.0
      - lac__D_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12895
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SLGH
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SMIA1
    - name: Staphyloferrin A Mediated Iron Acquisition
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__istfrnA_e: 1.0
      - fe2_e: -1.0
      - stfrnA_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12365
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SMIA1
      - sbo: SBO:0000176
  - !!omap
    - id: SMIA1Eabc
    - name: 'Siderophore Mediated Iron Acquisition: Staphyloferrin A export'
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - stfrnA_c: -1.0
      - stfrnA_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12365
    - annotation: !!omap
      - biggr: SMIA1Eabc:2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SMIA2abc
    - name: 'Siderophore Mediated Iron Acquisition: Staphyloferrin B transport via
        ABC'
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__istfrnA_e: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - fe2_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - stfrnA_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12365
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SMIA2abc
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SMIB1
    - name: Staphyloferrin B Mediated Iron Acquisition
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__istfrnB_e: 1.0
      - __iPKB_Clostridiaceae__stfrnB_e: -1.0
      - fe2_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12365
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SMIB1
      - sbo: SBO:0000176
  - !!omap
    - id: SO3R
    - name: Sulfite reductase
    - metabolites: !!omap
      - h2o_c: 3.0
      - h2s_c: 1.0
      - h_c: -5.0
      - nad_c: 3.0
      - nadh_c: -3.0
      - so3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16885
    - annotation: !!omap
      - biggr: SO3R:2
      - sbo: SBO:0000176
  - !!omap
    - id: SO4t2
    - name: R_sulfate_transport_in_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - so4_c: 1.0
      - so4_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09965
    - annotation: !!omap
      - biggr: SO4t2
      - sbo: SBO:0000655
  - !!omap
    - id: SPMDabc
    - name: spermidine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - spmd_c: 1.0
      - spmd_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09070 or CLOINNGCF_022845735_15540
        or CLOINNGCF_022845735_15550 or (CLOINNGCF_022845735_04160 and 
        CLOINNGCF_022845735_15540) or (CLOINNGCF_022845735_04260 and 
        CLOINNGCF_022845735_15540)
    - annotation: !!omap
      - biggr: SPMDabc
      - sbo: SBO:0000655
  - !!omap
    - id: SPMDt3i
    - name: R_spermidine_transport_in_via_proton_antiport
    - metabolites: !!omap
      - h_c: -1.0
      - h_e: 1.0
      - spmd_c: 1.0
      - spmd_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_16655
    - annotation: !!omap
      - biggr: SPMDt3i
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SPMS
    - name: Spermidine synthase
    - metabolites: !!omap
      - 5mta_c: 1.0
      - __iPKB_Clostridiaceae__ametam_c: -1.0
      - h_c: 1.0
      - ptrc_c: -1.0
      - spmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SPMS
      - sbo: SBO:0000176
  - !!omap
    - id: SPODM_1
    - name: superoxide dismutase
    - metabolites: !!omap
      - h2o2_c: 1.0
      - h_c: -2.0
      - o2_c: 1.0
      - o2s_c: -2.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03885
    - annotation: !!omap
      - biggr: SPODM_1
      - rhea: RHEA:20696
      - sbo: SBO:0000176
  - !!omap
    - id: SPT_syn
    - name: serine-glyoxilate aminotransferase
    - metabolites: !!omap
      - glx_c: -1.0
      - gly_c: 1.0
      - hpyr_c: 1.0
      - ser__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09050
    - annotation: !!omap
      - biggr: SPT_syn
      - rhea: RHEA:19125
      - sbo: SBO:0000176
  - !!omap
    - id: SPTc
    - name: Serine-pyruvate aminotransferase
    - metabolites: !!omap
      - ala__L_c: 1.0
      - hpyr_c: 1.0
      - pyr_c: -1.0
      - ser__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09050
    - annotation: !!omap
      - biggr: SPTc
      - rhea: RHEA:22852
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__SR5
    - name: ''
    - metabolites: !!omap
      - actp_c: 1.0
      - glyb_c: -1.0
      - h2o_c: 1.0
      - h_c: -1.0
      - pi_c: -1.0
      - tmam_c: 1.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02260
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SR5
      - sbo: SBO:0000176
  - !!omap
    - id: STFRNAt
    - name: ''
    - metabolites: !!omap
      - stfrnA_c: -1.0
      - stfrnA_e: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15585
    - annotation: !!omap
      - biggr: STFRNAt:2
      - sbo: SBO:0000655
  - !!omap
    - id: SUCASPtpp
    - name: succinate:aspartate antiporter (periplasm)
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21770
    - annotation: !!omap
      - biggr: SUCASPtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCFUMtpp
    - name: succinate:fumarate antiporter (periplasm)
    - metabolites: !!omap
      - fum_c: 1.0
      - fum_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21770
    - annotation: !!omap
      - biggr: SUCFUMtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCMALtpp
    - name: succinate:malate antiporter (periplasm)
    - metabolites: !!omap
      - mal__L_c: 1.0
      - mal__L_p: -1.0
      - succ_c: -1.0
      - succ_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21770
    - annotation: !!omap
      - biggr: SUCMALtpp
      - sbo: SBO:0000655
  - !!omap
    - id: SUCR
    - name: sucrose hydrolase
    - metabolites: !!omap
      - fru_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - sucr_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19050
    - annotation: !!omap
      - biggr: SUCR
      - sbo: SBO:0000176
  - !!omap
    - id: SUCRt2
    - name: R_sucrose_transport_in_via_proton_symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - sucr_c: 1.0
      - sucr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: SUCRt2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__SUCpts
    - name: Sucrose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__suc6p_c: 1.0
      - pep_c: -1.0
      - pyr_c: 1.0
      - sucr_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945) or (CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_19025 and CLOINNGCF_022845735_21945)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__SUCpts
      - sbo: SBO:0000655
  - !!omap
    - id: SULabc
    - name: sulfate transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - so4_c: 1.0
      - so4_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03215 or CLOINNGCF_022845735_04260
        or CLOINNGCF_022845735_06170 or CLOINNGCF_022845735_09070
    - annotation: !!omap
      - biggr: SULabc
      - sbo: SBO:0000655
  - !!omap
    - id: St
    - name: Sulfur diffusion
    - metabolites: !!omap
      - s_c: 1.0
      - s_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: spontaneous
    - annotation: !!omap
      - biggr: St
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__T2ECR
    - name: ''
    - metabolites: !!omap
      - b2coa_c: -1.0
      - btcoa_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13875
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__T2ECR
      - rhea: RHEA:27906
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TALA
    - name: Transaldolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: -1.0
      - e4p_c: 1.0
      - f6p_c: 1.0
      - s7p_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02085 or CLOINNGCF_022845735_05565
        or CLOINNGCF_022845735_15225
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TALA
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TGBPA
    - name: Tagatose-bisphosphate aldolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - __iPKB_Clostridiaceae__tagdp__D_c: -1.0
      - dhap_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24345 or CLOINNGCF_022845735_24740
        or (CLOINNGCF_022845735_15270 and CLOINNGCF_022845735_24740)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TGBPA
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TGTpts
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: 1.0
      - __iPKB_Clostridiaceae__tgt_e: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05525
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TGTpts
      - sbo: SBO:0000655
  - !!omap
    - id: THDPS
    - name: tetrahydrodipicolinate succinylase
    - metabolites: !!omap
      - coa_c: 1.0
      - h2o_c: -1.0
      - sl2a6o_c: 1.0
      - succoa_c: -1.0
      - thdp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02175
    - annotation: !!omap
      - biggr: THDPS
      - rhea: RHEA:17325
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__THIORDXi
    - name: Hydrogen peroxide reductase (thioredoxin)
    - metabolites: !!omap
      - h2o2_c: -1.0
      - h2o_c: 2.0
      - trdox_c: 1.0
      - trdrd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06720 or CLOINNGCF_022845735_07505
        or CLOINNGCF_022845735_07740 or CLOINNGCF_022845735_10745 or 
        (CLOINNGCF_022845735_04340 and CLOINNGCF_022845735_10745) or 
        (CLOINNGCF_022845735_06720 and CLOINNGCF_022845735_12290) or 
        (CLOINNGCF_022845735_07505 and CLOINNGCF_022845735_10745) or 
        (CLOINNGCF_022845735_09125 and CLOINNGCF_022845735_10745) or 
        (CLOINNGCF_022845735_10745 and CLOINNGCF_022845735_24245)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__THIORDXi
      - sbo: SBO:0000176
  - !!omap
    - id: THMDP
    - name: acidphosphatase
    - metabolites: !!omap
      - h2o_c: -2.0
      - h_c: 1.0
      - pi_c: 2.0
      - thm_c: 1.0
      - thmpp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16070
    - annotation: !!omap
      - biggr: THMDP
      - sbo: SBO:0000176
  - !!omap
    - id: THMP
    - name: R_thiamin_phosphatase
    - metabolites: !!omap
      - h2o_c: -1.0
      - pi_c: 1.0
      - thm_c: 1.0
      - thmmp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: THMP
      - rhea: RHEA:47948
      - sbo: SBO:0000176
  - !!omap
    - id: THPAT
    - name: R_Tetrahydrodipicolinate_acetyltransferase
    - metabolites: !!omap
      - acamoxm_c: 1.0
      - accoa_c: -1.0
      - coa_c: 1.0
      - h2o_c: -1.0
      - thdp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02175
    - annotation: !!omap
      - biggr: THPAT
      - rhea: RHEA:13085
      - sbo: SBO:0000176
  - !!omap
    - id: THRA
    - name: Threonine aldolase
    - metabolites: !!omap
      - acald_c: 1.0
      - gly_c: 1.0
      - thr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13815
    - annotation: !!omap
      - biggr: THRA
      - rhea: RHEA:19625
      - sbo: SBO:0000176
  - !!omap
    - id: THRD_L
    - name: L-threonine deaminase
    - metabolites: !!omap
      - 2obut_c: 1.0
      - nh4_c:1: 1.0
      - thr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08890 or CLOINNGCF_022845735_10910
    - annotation: !!omap
      - biggr: THRD_L
      - rhea: RHEA:22108
      - sbo: SBO:0000176
  - !!omap
    - id: THRS_2
    - name: threonine synthase
    - metabolites: !!omap
      - h2o_c: -1.0
      - phom_c: -1.0
      - pi_c: 1.0
      - thr__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_19765
    - annotation: !!omap
      - biggr: THRS_2
      - rhea: RHEA:10840
      - sbo: SBO:0000176
  - !!omap
    - id: THRabc
    - name: L-threonine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - thr__L_c: 1.0
      - thr__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_03580 and 
        CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03590 and 
        CLOINNGCF_022845735_03595 and CLOINNGCF_022845735_03600)
    - annotation: !!omap
      - biggr: THRabc
      - sbo: SBO:0000655
  - !!omap
    - id: THYMt
    - name: thymine reversible transport via facilated diffusion
    - metabolites: !!omap
      - thym_c: 1.0
      - thym_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16480
    - annotation: !!omap
      - biggr: THYMt
      - sbo: SBO:0000655
  - !!omap
    - id: THZPSN
    - name: thiazole phosphate synthesis
    - metabolites: !!omap
      - 4hba_c: 1.0
      - 4mpetz_c: 1.0
      - ala__L_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - co2_c: 1.0
      - cys__L_c: -1.0
      - dxyl5p_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - tyr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00105 or CLOINNGCF_022845735_06965
        or CLOINNGCF_022845735_11975 or CLOINNGCF_022845735_24985
    - annotation: !!omap
      - biggr: THZPSN
      - sbo: SBO:0000176
  - !!omap
    - id: THZPSN:2
    - name: thiazole phosphate synthesis
    - metabolites: !!omap
      - 4hba_c: 1.0
      - 4mpetz_c: 1.0
      - ala__L_c: 1.0
      - amp_c: 1.0
      - atp_c: -1.0
      - co2_c: 1.0
      - cys__L_c: -1.0
      - dxyl5p_c: -1.0
      - h2o_c: 1.0
      - h_c: 1.0
      - ppi_c: 1.0
      - tyr__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11975
    - annotation: !!omap
      - biggr: THZPSN
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TKT1
    - name: Transketolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - s7p_c: 1.0
      - xu5p__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01800 or CLOINNGCF_022845735_01805
        or CLOINNGCF_022845735_07580 or CLOINNGCF_022845735_23930 or 
        (CLOINNGCF_022845735_07575 and CLOINNGCF_022845735_07580)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TKT1
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TKT2
    - name: Transketolase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - e4p_c: -1.0
      - f6p_c: 1.0
      - xu5p__D_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01800 or CLOINNGCF_022845735_01805
        or CLOINNGCF_022845735_07580 or CLOINNGCF_022845735_23925 or 
        CLOINNGCF_022845735_23930 or (CLOINNGCF_022845735_07575 and 
        CLOINNGCF_022845735_07580)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TKT2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TMAMt
    - name: ''
    - metabolites: !!omap
      - tmam_c: 1.0
      - tmam_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TMAMt
      - sbo: SBO:0000655
  - !!omap
    - id: TMDK1
    - name: thymidine kinase (ATP:thymidine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dtmp_c: 1.0
      - h_c: 1.0
      - thymd_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02025
    - annotation: !!omap
      - biggr: TMDK1
      - rhea: RHEA:19129
      - sbo: SBO:0000176
  - !!omap
    - id: TMDPK
    - name: R_thiamine_diphosphokinase
    - metabolites: !!omap
      - amp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - thm_c: -1.0
      - thmpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09510
    - annotation: !!omap
      - biggr: TMDPK
      - rhea: RHEA:11576
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TMDPP
    - name: Thymidine phosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__2dr1p_c: 1.0
      - pi_c: -1.0
      - thym_c: 1.0
      - thymd_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12390
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TMDPP
      - sbo: SBO:0000176
  - !!omap
    - id: TMPK
    - name: thiamine-phosphate kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - thmmp_c: -1.0
      - thmpp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: TMPK
      - rhea: RHEA:15913
      - sbo: SBO:0000176
  - !!omap
    - id: TMPPP
    - name: thiamine-phosphate diphosphorylase
    - metabolites: !!omap
      - 2mahmp_c: -1.0
      - 4mpetz_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - thmmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00680
    - annotation: !!omap
      - biggr: TMPPP
      - rhea: RHEA:22328
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TPI
    - name: Triose-phosphate isomerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - dhap_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03490 or CLOINNGCF_022845735_03495
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TPI
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TRDR
    - name: Thioredoxin reductase (NADPH)
    - metabolites: !!omap
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - trdox_c: -1.0
      - trdrd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04335 or CLOINNGCF_022845735_04340
        or CLOINNGCF_022845735_07505 or CLOINNGCF_022845735_07740 or 
        CLOINNGCF_022845735_09125 or CLOINNGCF_022845735_12290 or 
        CLOINNGCF_022845735_21790 or CLOINNGCF_022845735_24245 or 
        CLOINNGCF_022845735_24250
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TRDR
      - sbo: SBO:0000176
  - !!omap
    - id: TRE6PH
    - name: trehalose-6-phosphate hydrolase
    - metabolites: !!omap
      - g6p_c: 1.0
      - glc__D_c: 1.0
      - h2o_c: -1.0
      - tre6p_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00895
    - annotation: !!omap
      - biggr: TRE6PH
      - rhea: RHEA:23008
      - sbo: SBO:0000176
  - !!omap
    - id: TREHpp
    - name: alpha,alpha-trehalase (periplasm)
    - metabolites: !!omap
      - glc__D_p: 2.0
      - h2o_p: -1.0
      - tre_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: TREHpp
      - sbo: SBO:0000176
  - !!omap
    - id: TREpts
    - name: trehalose transport via PEP:Pyr PTS
    - metabolites: !!omap
      - pep_c: -1.0
      - pyr_c: 1.0
      - tre6p_c: 1.0
      - tre_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06230 and 
        CLOINNGCF_022845735_21945
    - annotation: !!omap
      - biggr: TREpts
      - sbo: SBO:0000655
  - !!omap
    - id: TREtex
    - name: trehalose transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - tre_e: -1.0
      - tre_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: TREtex
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__TRPS1
    - name: Tryptophan synthase (indoleglycerol phosphate)
    - metabolites: !!omap
      - 3ig3p_c: -1.0
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - h2o_c: 1.0
      - ser__L_c: -1.0
      - trp__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21180 or 
        (CLOINNGCF_022845735_21180 and CLOINNGCF_022845735_21185)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TRPS1
      - sbo: SBO:0000176
  - !!omap
    - id: TRPS2
    - name: tryptophan synthase (indole)
    - metabolites: !!omap
      - h2o_c: 1.0
      - indole_c: -1.0
      - ser__L_c: -1.0
      - trp__L_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21180
    - annotation: !!omap
      - biggr: TRPS2
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TRPS3
    - name: Tryptophan synthase (indoleglycerol phosphate)
    - metabolites: !!omap
      - 3ig3p_c: -1.0
      - __iPKB_Clostridiaceae__g3p_c: 1.0
      - indole_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21180 or CLOINNGCF_022845735_21185
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TRPS3
      - sbo: SBO:0000176
  - !!omap
    - id: TRPTA
    - name: tryptophan transaminase
    - metabolites: !!omap
      - akg_c: -1.0
      - glu__L_c: 1.0
      - indpyr_c: 1.0
      - trp__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02115
    - annotation: !!omap
      - biggr: TRPTA
      - rhea: RHEA:14093
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TRPabc
    - name: ''
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - trp__L_c: 1.0
      - trp__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TRPabc
      - sbo: SBO:0000655
  - !!omap
    - id: TYRTA
    - name: tyrosine transaminase
    - metabolites: !!omap
      - 34hpp_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - tyr__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02115 or CLOINNGCF_022845735_06895
        or CLOINNGCF_022845735_06905 or CLOINNGCF_022845735_11340
    - annotation: !!omap
      - biggr: TYRTA
      - rhea: RHEA:15093
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__TYRabc
    - name: ''
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - tyr__L_c: 1.0
      - tyr__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__TYRabc
      - sbo: SBO:0000655
  - !!omap
    - id: UAAGDS
    - name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate 
        synthetase
    - metabolites: !!omap
      - 26dap__M_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uamag_c: -1.0
      - ugmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13080
    - annotation: !!omap
      - biggr: UAAGDS
      - rhea: RHEA:23676
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAG4Ei
    - name: UDP-N-acetylglucosamine 4-epimerase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__udpacgal_c: 1.0
      - uacgam_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAG4Ei
      - sbo: SBO:0000176
  - !!omap
    - id: UAGCVT_1
    - name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
    - metabolites: !!omap
      - pep_c: -1.0
      - pi_c: 1.0
      - uaccg_c: 1.0
      - uacgam_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00975
    - annotation: !!omap
      - biggr: UAGCVT_1
      - rhea: RHEA:18681
      - sbo: SBO:0000176
  - !!omap
    - id: UAGCVT_1:2
    - name: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
    - metabolites: !!omap
      - pep_c: -1.0
      - pi_c: 1.0
      - uaccg_c: 1.0
      - uacgam_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00975
    - annotation: !!omap
      - biggr: UAGCVT_1
      - rhea: RHEA:18681
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAGDP
    - name: UDP-N-acetylglucosamine diphosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acgam1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - uacgam_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00865 or CLOINNGCF_022845735_09080
        or CLOINNGCF_022845735_22460 or CLOINNGCF_022845735_22615
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAGDP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAGDP:2
    - name: UDP-N-acetylglucosamine diphosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acgam1p_c: -1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - uacgam_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00865
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAGDP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAGHD
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uamr_c: 1.0
      - h_c: -1.0
      - nad_c: 1.0
      - nadh_c: -1.0
      - uaccg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14465
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAGHD
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAGPT3
    - name: 
        UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol
        N-acetylglucosamine transferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uaagmda_c: 1.0
      - __iPKB_Clostridiaceae__uagmda_c: -1.0
      - h_c: 1.0
      - uacgam_c: -1.0
      - udp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14830
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAGPT3
      - sbo: SBO:0000176
  - !!omap
    - id: UAMAGS
    - name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - glu__D_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uama_c: -1.0
      - uamag_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15705
    - annotation: !!omap
      - biggr: UAMAGS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAMAS
    - name: UDP-N-acetylmuramoyl-L-alanine synthetase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uamr_c: -1.0
      - adp_c: 1.0
      - ala__L_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - uama_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12300
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAMAS
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UAPGR
    - name: UDP-N-acetylenolpyruvoylglucosamine reductase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__uamr_c: 1.0
      - h_c: -1.0
      - nadp_c: 1.0
      - nadph_c: -1.0
      - uaccg_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_14465 or CLOINNGCF_022845735_14825
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UAPGR
      - sbo: SBO:0000176
  - !!omap
    - id: UTCY
    - name: UTP:cytidine 5"-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
      - udp_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: UTCY
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UDCPDP
    - name: Undecaprenyl-diphosphatase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__udcpdp_c: -1.0
      - __iPKB_Clostridiaceae__udcpp_c: 1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15700
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UDCPDP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UDCPDPS
    - name: Undecaprenyl diphosphate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__udcpdp_c: 1.0
      - frdp_c: -1.0
      - h_c: -1.0
      - ipdp_c: -8.0
      - ppi_c: 8.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12185
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UDCPDPS
      - sbo: SBO:0000176
  - !!omap
    - id: DCTUP:2
    - name: DCTP:uridine 5'-phosphotransferase
    - metabolites: !!omap
      - dcdp_c: 1.0
      - dctp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: DCTUP
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UDPACGLP
    - name: UDP N acetylglucosamine diphosphorylase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__acgam1p_c: -1.0
      - __iPKB_Clostridiaceae__udpacgal_c: 1.0
      - h_c: -1.0
      - ppi_c: 1.0
      - utp_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_00865
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UDPACGLP
      - sbo: SBO:0000176
  - !!omap
    - id: UDPG4E
    - name: UDPglucose 4-epimerase
    - metabolites: !!omap
      - udpg_c: -1.0
      - udpgal_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_22120 or CLOINNGCF_022845735_22585
    - annotation: !!omap
      - biggr: UDPG4E
      - rhea: RHEA:22168
      - sbo: SBO:0000176
  - !!omap
    - id: UDUPP
    - name: UTP:uridine 5"-phosphotransferase
    - metabolites: !!omap
      - h_c: 1.0
      - udp_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: UDUPP
      - sbo: SBO:0000176
  - !!omap
    - id: UGMDDS
    - name: 
        UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
        synthetase
    - metabolites: !!omap
      - adp_c: 1.0
      - alaala_c: -1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ugmd_c: -1.0
      - ugmda_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06810 or CLOINNGCF_022845735_15500
    - annotation: !!omap
      - biggr: UGMDDS
      - rhea: RHEA:28374
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UM3PL
    - name: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate 
        ligase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__LalaDgluMdap_c: -1.0
      - __iPKB_Clostridiaceae__uamr_c: -1.0
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - ugmd_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UM3PL
      - sbo: SBO:0000176
  - !!omap
    - id: UMPK
    - name: UMP kinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - udp_c: 1.0
      - ump_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12175 or CLOINNGCF_022845735_12830
    - annotation: !!omap
      - biggr: UMPK
      - rhea: RHEA:24400
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UPP3MT
    - name: Uroporphyrinogen methyltransferase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__dscl_c: 1.0
      - ahcys_c: 2.0
      - amet_c: -2.0
      - h_c: 1.0
      - uppg3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11665 or CLOINNGCF_022845735_11680
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UPP3MT
      - sbo: SBO:0000176
  - !!omap
    - id: UPP3S
    - name: uroporphyrinogen-III synthase
    - metabolites: !!omap
      - h2o_c: 1.0
      - hmbil_c: -1.0
      - uppg3_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_11665
    - annotation: !!omap
      - biggr: UPP3S
      - rhea: RHEA:18965
      - sbo: SBO:0000176
  - !!omap
    - id: UPPDC1
    - name: uroporphyrinogen decarboxylase (uroporphyrinogen III)
    - metabolites: !!omap
      - co2_c: 4.0
      - cpppg3_c: 1.0
      - h_c: -4.0
      - uppg3_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02370
    - annotation: !!omap
      - biggr: UPPDC1
      - rhea: RHEA:19865
      - sbo: SBO:0000176
  - !!omap
    - id: UPPN
    - name: b-ureidopropionase
    - metabolites: !!omap
      - ala_B_c: 1.0
      - cala_c: -1.0
      - co2_c: 1.0
      - h2o_c: -1.0
      - h_c: -2.0
      - nh4_c:1: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21515
    - annotation: !!omap
      - biggr: UPPN
      - rhea: RHEA:11184
      - sbo: SBO:0000176
  - !!omap
    - id: UPPRT
    - name: uracil phosphoribosyltransferase
    - metabolites: !!omap
      - ppi_c: 1.0
      - prpp_c: -1.0
      - ump_c: 1.0
      - ura_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01535 or CLOINNGCF_022845735_06270
    - annotation: !!omap
      - biggr: UPPRT
      - rhea: RHEA:13017
      - sbo: SBO:0000176
  - !!omap
    - id: URAt
    - name: uracil transport via facilated diffusion
    - metabolites: !!omap
      - ura_c: 1.0
      - ura_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_16480
    - annotation: !!omap
      - biggr: URAt
      - sbo: SBO:0000655
  - !!omap
    - id: URAt2
    - name: uracil transport in via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - ura_c: 1.0
      - ura_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09575
    - annotation: !!omap
      - biggr: URAt2
      - sbo: SBO:0000655
  - !!omap
    - id: UREAabcpp
    - name: Urea transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - urea_c: 1.0
      - urea_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03205
    - annotation: !!omap
      - biggr: UREAabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: UREAtex
    - name: Urea transport via diffusion (extracellular to periplasm)
    - metabolites: !!omap
      - urea_e: -1.0
      - urea_p: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: UREAtex
      - sbo: SBO:0000655
  - !!omap
    - id: URIDK2r
    - name: uridylate kinase (dUMP)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - dudp_c: 1.0
      - dump_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02655 or CLOINNGCF_022845735_12175
        or CLOINNGCF_022845735_12830
    - annotation: !!omap
      - biggr: URIDK2r
      - rhea: RHEA:30655
      - sbo: SBO:0000176
  - !!omap
    - id: URIH
    - name: Uridine hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - rib__D_c: 1.0
      - ura_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21765
    - annotation: !!omap
      - biggr: URIH
      - rhea: RHEA:15577
      - sbo: SBO:0000176
  - !!omap
    - id: URIK1_1
    - name: uridine kinase (ATP:Uridine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515 or CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: URIK1_1
      - rhea: RHEA:16825
      - sbo: SBO:0000176
  - !!omap
    - id: URIK1_1:2
    - name: uridine kinase (ATP:Uridine)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: URIK1_1
      - rhea: RHEA:16825
      - sbo: SBO:0000176
  - !!omap
    - id: URIK2
    - name: uridine kinase (GTP:Uridine)
    - metabolites: !!omap
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515 or CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: URIK2
      - rhea: RHEA:27650
      - sbo: SBO:0000176
  - !!omap
    - id: URIK2:2
    - name: uridine kinase (GTP:Uridine)
    - metabolites: !!omap
      - gdp_c: 1.0
      - gtp_c: -1.0
      - h_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: URIK2
      - rhea: RHEA:27650
      - sbo: SBO:0000176
  - !!omap
    - id: URIK3
    - name: uridine kinase (ITP:Uridine)
    - metabolites: !!omap
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515 or CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: URIK3
      - sbo: SBO:0000176
  - !!omap
    - id: URIK3:2
    - name: uridine kinase (ITP:Uridine)
    - metabolites: !!omap
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
      - ump_c: 1.0
      - uri_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13580
    - annotation: !!omap
      - biggr: URIK3
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__UT6PT
    - name: ''
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__tag6p__D_c: -1.0
      - __iPKB_Clostridiaceae__tagdp__D_c: 1.0
      - h_c: 1.0
      - udp_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__UT6PT
      - sbo: SBO:0000176
  - !!omap
    - id: UTCY:2
    - name: UTP:cytidine 5"-phosphotransferase
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
      - udp_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: UTCY
      - sbo: SBO:0000176
  - !!omap
    - id: UDUPP:2
    - name: UTP:uridine 5"-phosphotransferase
    - metabolites: !!omap
      - h_c: 1.0
      - udp_c: 1.0
      - ump_c: 1.0
      - uri_c: -1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_09515
    - annotation: !!omap
      - biggr: UDUPP
      - sbo: SBO:0000176
  - !!omap
    - id: ITCY:2
    - name: R_cytidine_kinase__ITP_
    - metabolites: !!omap
      - cmp_c: 1.0
      - cytd_c: -1.0
      - h_c: 1.0
      - idp_c: 1.0
      - itp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_12830
    - annotation: !!omap
      - biggr: ITCY
      - sbo: SBO:0000176
  - !!omap
    - id: VALTA
    - name: valine transaminase
    - metabolites: !!omap
      - 3mob_c: 1.0
      - akg_c: -1.0
      - glu__L_c: 1.0
      - val__L_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10230
    - annotation: !!omap
      - biggr: VALTA
      - rhea: RHEA:24813
      - sbo: SBO:0000176
  - !!omap
    - id: VALabc
    - name: L-valine transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - val__L_c: 1.0
      - val__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_15440 or CLOINNGCF_022845735_21125
        or CLOINNGCF_022845735_21130 or (CLOINNGCF_022845735_03580 and 
        CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03590 and 
        CLOINNGCF_022845735_03595 and CLOINNGCF_022845735_03600)
    - annotation: !!omap
      - biggr: VALabc
      - sbo: SBO:0000655
  - !!omap
    - id: VALabcpp
    - name: L-valine transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - val__L_c: 1.0
      - val__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03595 or CLOINNGCF_022845735_03600
        or (CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03595) or 
        (CLOINNGCF_022845735_03595 and CLOINNGCF_022845735_03600) or 
        (CLOINNGCF_022845735_03585 and CLOINNGCF_022845735_03595 and 
        CLOINNGCF_022845735_03600)
    - annotation: !!omap
      - biggr: VALabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: VALt2r
    - name: L-valine reversible transport via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - val__L_c: 1.0
      - val__L_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03910 or CLOINNGCF_022845735_18815
        or (CLOINNGCF_022845735_18810 and CLOINNGCF_022845735_18815)
    - annotation: !!omap
      - biggr: VALt2r
      - sbo: SBO:0000655
  - !!omap
    - id: VALt2rpp
    - name: L-valine reversible transport via proton symport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - val__L_c: 1.0
      - val__L_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05885
    - annotation: !!omap
      - biggr: VALt2rpp
      - sbo: SBO:0000655
  - !!omap
    - id: VALt3pp
    - name: L-valine transport out via proton antiport (periplasm)
    - metabolites: !!omap
      - h_c: 1.0
      - h_p: -1.0
      - val__L_c: -1.0
      - val__L_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_05885
    - annotation: !!omap
      - biggr: VALt3pp
      - sbo: SBO:0000655
  - !!omap
    - id: VPAMTr
    - name: Valine-pyruvate aminotransferase
    - metabolites: !!omap
      - 3mob_c: -1.0
      - ala__L_c: -1.0
      - pyr_c: 1.0
      - val__L_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10990
    - annotation: !!omap
      - biggr: VPAMTr
      - rhea: RHEA:22912
      - sbo: SBO:0000176
  - !!omap
    - id: X5PL3E
    - name: L-xylulose 5-phosphate 3-epimerase
    - metabolites: !!omap
      - ru5p__L_c: 1.0
      - xu5p__L_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02960
    - annotation: !!omap
      - biggr: X5PL3E
      - rhea: RHEA:18497
      - sbo: SBO:0000176
  - !!omap
    - id: XANt2
    - name: xanthine transport in via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - xan_c: 1.0
      - xan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02510
    - annotation: !!omap
      - biggr: XANt2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__XANt3
    - name: ''
    - metabolites: !!omap
      - ura_c: 1.0
      - ura_e: -1.0
      - xan_c: 1.0
      - xan_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_07060
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__XANt3
      - sbo: SBO:0000655
  - !!omap
    - id: XPPT
    - name: xanthine phosphoribosyltransferase
    - metabolites: !!omap
      - ppi_c: 1.0
      - prpp_c: -1.0
      - xan_c: -1.0
      - xmp_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_13710
    - annotation: !!omap
      - biggr: XPPT
      - sbo: SBO:0000176
  - !!omap
    - id: XTSNH
    - name: Xanthosine hydrolase
    - metabolites: !!omap
      - h2o_c: -1.0
      - rib__D_c: 1.0
      - xan_c: 1.0
      - xtsn_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_21765
    - annotation: !!omap
      - biggr: XTSNH
      - sbo: SBO:0000176
  - !!omap
    - id: XYLI1
    - name: xylose isomerase
    - metabolites: !!omap
      - xyl__D_c: -1.0
      - xylu__D_c: 1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - annotation: !!omap
      - biggr: XYLI1
      - sbo: SBO:0000176
  - !!omap
    - id: XYLK
    - name: xylulokinase
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h_c: 1.0
      - xu5p__D_c: 1.0
      - xylu__D_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_24945
    - annotation: !!omap
      - biggr: XYLK
      - rhea: RHEA:10964
      - sbo: SBO:0000176
  - !!omap
    - id: XYLabc
    - name: D-xylose transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - xyl__D_c: 1.0
      - xyl__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_03215 or 
        (CLOINNGCF_022845735_11935 and CLOINNGCF_022845735_11945) or 
        (CLOINNGCF_022845735_06210 and CLOINNGCF_022845735_06215 and 
        CLOINNGCF_022845735_06220)
    - annotation: !!omap
      - biggr: XYLabc
      - sbo: SBO:0000655
  - !!omap
    - id: XYLt
    - name: R_D_xylose_reversible_transport
    - metabolites: !!omap
      - xyl__D_c: 1.0
      - xyl__D_e: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_01285 and 
        CLOINNGCF_022845735_01290 and CLOINNGCF_022845735_04540 and 
        CLOINNGCF_022845735_23320
    - annotation: !!omap
      - biggr: XYLt
      - sbo: SBO:0000655
  - !!omap
    - id: XYLt2
    - name: D-xylose transport in via proton symport
    - metabolites: !!omap
      - h_c: 1.0
      - h_e: -1.0
      - xyl__D_c: 1.0
      - xyl__D_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_18715
    - annotation: !!omap
      - biggr: XYLt2
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__PSUDS:2
    - name: Pseudouridylate synthase
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__r5p_c: -1.0
      - h2o_c: 1.0
      - psd5p_c: 1.0
      - ura_c: -1.0
    - lower_bound: -1000.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_02460 or CLOINNGCF_022845735_12625
        or (CLOINNGCF_022845735_04230 and CLOINNGCF_022845735_12625) or 
        (CLOINNGCF_022845735_11305 and CLOINNGCF_022845735_12380 and 
        CLOINNGCF_022845735_13100)
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__PSUDS
      - sbo: SBO:0000176
  - !!omap
    - id: ZN2abcpp
    - name: Zinc (Zn+2) ABC transporter, efflux (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - zn2_c: -1.0
      - zn2_p: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06990
    - annotation: !!omap
      - biggr: ZN2abcpp
      - sbo: SBO:0000655
  - !!omap
    - id: ZN2tpp
    - name: zinc transport in via permease (no H+)
    - metabolites: !!omap
      - zn2_c: 1.0
      - zn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08540
    - annotation: !!omap
      - biggr: ZN2tpp
      - sbo: SBO:0000655
  - !!omap
    - id: ZNabc
    - name: zinc transport via ABC system
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - zn2_c: 1.0
      - zn2_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06170 or CLOINNGCF_022845735_06285
        or CLOINNGCF_022845735_06990 or CLOINNGCF_022845735_10585 or 
        CLOINNGCF_022845735_19180 or (CLOINNGCF_022845735_00815 and 
        CLOINNGCF_022845735_10585) or (CLOINNGCF_022845735_06200 and 
        CLOINNGCF_022845735_19180)
    - annotation: !!omap
      - biggr: ZNabc
      - sbo: SBO:0000655
  - !!omap
    - id: ZNabcpp
    - name: zinc (Zn+2) transport via ABC system (periplasm)
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
      - zn2_c: 1.0
      - zn2_p: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08155 or CLOINNGCF_022845735_19180
    - annotation: !!omap
      - biggr: ZNabcpp
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__r0191
    - name: UTP:D-fructose-6-phosphate 1-phosphotransferase EC:2.7.1.11
    - metabolites: !!omap
      - __iPKB_Clostridiaceae__fdp_c: 1.0
      - f6p_c: -1.0
      - h_c: 1.0
      - udp_c: 1.0
      - utp_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_06195
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__r0191
      - sbo: SBO:0000176
  - !!omap
    - id: __iPKB_Clostridiaceae__r0280
    - name: DATP:pyruvate O2-phosphotransferase Purine metabolism EC:2.7.1.40
    - metabolites: !!omap
      - dadp_c: -1.0
      - datp_c: 1.0
      - h_c: -1.0
      - pep_c: -1.0
      - pyr_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_10620
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__r0280
      - rhea: RHEA:30727
      - sbo: SBO:0000176
  - !!omap
    - id: r0963
    - name: Facilitated diffusion
    - metabolites: !!omap
      - fol_c: 1.0
      - fol_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04215 and 
        CLOINNGCF_022845735_04220 and CLOINNGCF_022845735_04225
    - annotation: !!omap
      - biggr: r0963
      - sbo: SBO:0000655
  - !!omap
    - id: r1143
    - name: Major Facilitator(MFS) TCDB:2.A.18.6.3
    - metabolites: !!omap
      - asp__L_c: 1.0
      - asp__L_e: -1.0
      - na1_c: 1.0
      - na1_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_04235
    - annotation: !!omap
      - biggr: r1143
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__r2136
    - name: Major Facilitator(MFS) TCDB:2.A.1.14.6
    - metabolites: !!omap
      - na1_c: 1.0
      - na1_e: -1.0
      - pi_c: 1.0
      - pi_e: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: CLOINNGCF_022845735_08975
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__r2136
      - sbo: SBO:0000655
  - !!omap
    - id: __iPKB_Clostridiaceae__r2465_1
    - name: Cation Diffusion Facilitator (Cdf) Tcdb:2.A.4.2.3
    - metabolites: !!omap
      - zn2_c: -1.0
      - zn2_e: 1.0
    - lower_bound: -1000.0
    - upper_bound: 0.0
    - gene_reaction_rule: CLOINNGCF_022845735_06955 or CLOINNGCF_022845735_11000
        or CLOINNGCF_022845735_15205
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__r2465_1
      - sbo: SBO:0000655
  - !!omap
    - id: EX_sheme_c
    - name: Exchange of siroheme(8-).
    - metabolites: !!omap
      - sheme_c: -1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Intracellular source/sink
    - annotation: !!omap
      - biggr: EX_sheme_c
      - sbo: SBO:0000627
  - !!omap
    - id: __iPKB_Clostridiaceae__Growth
    - name: Biomass reaction
    - metabolites: !!omap
      - 10fthf_c: -0.000223
      - __iPKB_Clostridiaceae__ribflv_c: -0.000223
      - __iPKB_Clostridiaceae__uaagmda_c: -0.1
      - adp_c: 53.95
      - ala__L_c: -0.513689
      - amet_c: -0.000223
      - arg__L_c: -0.295792
      - asn__L_c: -0.241055
      - asp__L_c: -0.241055
      - atp_c: -54.124831
      - ca2_c: -0.005205
      - cl_c: -0.005205
      - coa_c: -0.000576
      - cobalt2_c: -0.0001
      - ctp_c: -0.133508
      - cu2_c: -0.000709
      - cys__L_c: -0.09158
      - datp_c: -0.026166
      - dctp_c: -0.027017
      - dgtp_c: -0.027017
      - dttp_c: -0.026166
      - fad_c: -0.000223
      - fe2_c: -0.006715
      - fe3_c: -0.007808
      - gln__L_c: -0.26316
      - glu__L_c: -0.26316
      - gly_c: -0.612638
      - gtp_c: -0.215096
      - h2o_c: -48.601527
      - h_c: 53.95
      - his__L_c: -0.094738
      - ile__L_c: -0.290529
      - k_c: -0.195193
      - leu__L_c: -0.450531
      - lys__L_c: -0.343161
      - met__L_c: -0.153686
      - mg2_c: -0.008675
      - mlthf_c: -0.000223
      - mn2_c: -0.000691
      - mql8_c: -0.0001
      - nad_c: -0.001831
      - nadp_c: -0.000447
      - phe__L_c: -0.185265
      - pi_c: 53.945662
      - ppi_c: 0.773903
      - pro__L_c: -0.221055
      - pydx5p_c: -0.000223
      - ser__L_c: -0.215792
      - so4_c: -0.004338
      - thf_c: -0.000223
      - thmpp_c: -0.000223
      - thr__L_c: -0.253687
      - trp__L_c: -0.056843
      - tyr__L_c: -0.137896
      - utp_c: -0.144104
      - val__L_c: -0.423162
      - zn2_c: -0.000341
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - objective_coefficient: 1.0
    - annotation: !!omap
      - biggr: __iPKB_Clostridiaceae__Growth
      - sbo: SBO:0000176
  - !!omap
    - id: ATPM:2
    - name: ATP maintenance requirement
    - metabolites: !!omap
      - adp_c: 1.0
      - atp_c: -1.0
      - h2o_c: -1.0
      - h_c: 1.0
      - pi_c: 1.0
    - lower_bound: 0.0
    - upper_bound: 1000.0
    - gene_reaction_rule: ''
    - subsystem: Biomass and maintenance functions
    - annotation: !!omap
      - biggr: ATPM
      - rhea: RHEA:13065
      - sbo: SBO:0000176
- genes:
  - !!omap
    - id: CLOINNGCF_022845735_02090
    - name: G_CLOINNGCF_022845735_02090
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_03370
    - name: G_CLOINNGCF_022845735_03370
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_03735
    - name: G_CLOINNGCF_022845735_03735
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_20400
    - name: G_CLOINNGCF_022845735_20400
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_19995
    - name: G_CLOINNGCF_022845735_19995
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02965
    - name: G_CLOINNGCF_022845735_02965
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_03610
    - name: G_CLOINNGCF_022845735_03610
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_03620
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    - name: G_CLOINNGCF_022845735_16860
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    - name: G_CLOINNGCF_022845735_18330
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    - name: G_CLOINNGCF_022845735_06230
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    - name: G_CLOINNGCF_022845735_13740
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    - name: G_CLOINNGCF_022845735_23465
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    - name: G_CLOINNGCF_022845735_10915
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    - name: G_CLOINNGCF_022845735_10920
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    - name: G_CLOINNGCF_022845735_13505
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    - name: G_CLOINNGCF_022845735_14730
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    - name: G_CLOINNGCF_022845735_18715
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    - name: G_CLOINNGCF_022845735_06845
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    - name: G_CLOINNGCF_022845735_13870
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    - name: G_CLOINNGCF_022845735_21065
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    - name: G_CLOINNGCF_022845735_13735
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    - name: G_CLOINNGCF_022845735_06305
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    - name: G_CLOINNGCF_022845735_19990
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    - name: G_CLOINNGCF_022845735_03605
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    - name: G_CLOINNGCF_022845735_16825
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    - name: G_CLOINNGCF_022845735_03155
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    - name: G_CLOINNGCF_022845735_11175
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    - name: G_CLOINNGCF_022845735_13580
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    - name: G_CLOINNGCF_022845735_13585
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    - name: G_CLOINNGCF_022845735_21160
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    - name: G_CLOINNGCF_022845735_21505
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    - name: G_CLOINNGCF_022845735_24780
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    - name: G_CLOINNGCF_022845735_07060
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    - name: G_CLOINNGCF_022845735_04090
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    - name: G_CLOINNGCF_022845735_00075
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    - name: G_CLOINNGCF_022845735_09630
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    - name: G_CLOINNGCF_022845735_21765
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    - name: G_CLOINNGCF_022845735_09275
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    - name: G_CLOINNGCF_022845735_05570
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    - name: G_CLOINNGCF_022845735_13165
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    - name: G_CLOINNGCF_022845735_13380
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    - name: G_CLOINNGCF_022845735_12745
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    - name: G_CLOINNGCF_022845735_12725
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    - name: G_CLOINNGCF_022845735_04270
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    - name: G_CLOINNGCF_022845735_08090
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    - name: G_CLOINNGCF_022845735_09070
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    - name: G_CLOINNGCF_022845735_01725
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    - name: G_CLOINNGCF_022845735_14405
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    - name: G_CLOINNGCF_022845735_10620
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    - name: G_CLOINNGCF_022845735_13750
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    - name: G_CLOINNGCF_022845735_09050
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    - name: G_CLOINNGCF_022845735_22625
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    - name: G_CLOINNGCF_022845735_02140
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    - name: G_CLOINNGCF_022845735_10255
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    - name: G_CLOINNGCF_022845735_14925
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    - name: G_CLOINNGCF_022845735_13910
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    - name: G_CLOINNGCF_022845735_14800
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    - name: G_CLOINNGCF_022845735_08955
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    - name: G_CLOINNGCF_022845735_00630
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    - name: G_CLOINNGCF_022845735_06205
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    - name: G_CLOINNGCF_022845735_06815
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    - name: G_CLOINNGCF_022845735_13765
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    - name: G_CLOINNGCF_022845735_09975
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    - name: G_CLOINNGCF_022845735_15490
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    - name: G_CLOINNGCF_022845735_00130
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    - name: G_CLOINNGCF_022845735_18980
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    - name: G_CLOINNGCF_022845735_19055
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    - name: G_CLOINNGCF_022845735_07050
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    - name: G_CLOINNGCF_022845735_02115
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    - name: G_CLOINNGCF_022845735_03590
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    - name: G_CLOINNGCF_022845735_15440
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    - name: G_CLOINNGCF_022845735_21125
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    - name: G_CLOINNGCF_022845735_03585
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    - name: G_CLOINNGCF_022845735_03595
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    - name: G_CLOINNGCF_022845735_03580
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    - name: G_CLOINNGCF_022845735_03600
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    - name: G_CLOINNGCF_022845735_21130
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    - name: G_CLOINNGCF_022845735_06970
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    - name: G_CLOINNGCF_022845735_21275
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    - id: CLOINNGCF_022845735_02085
    - name: G_CLOINNGCF_022845735_02085
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_15225
    - name: G_CLOINNGCF_022845735_15225
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_15270
    - name: G_CLOINNGCF_022845735_15270
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_24345
    - name: G_CLOINNGCF_022845735_24345
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02175
    - name: G_CLOINNGCF_022845735_02175
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_10745
    - name: G_CLOINNGCF_022845735_10745
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_07740
    - name: G_CLOINNGCF_022845735_07740
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06720
    - name: G_CLOINNGCF_022845735_06720
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_16070
    - name: G_CLOINNGCF_022845735_16070
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_13815
    - name: G_CLOINNGCF_022845735_13815
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_00105
    - name: G_CLOINNGCF_022845735_00105
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06965
    - name: G_CLOINNGCF_022845735_06965
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_23930
    - name: G_CLOINNGCF_022845735_23930
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_07580
    - name: G_CLOINNGCF_022845735_07580
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_01805
    - name: G_CLOINNGCF_022845735_01805
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_07575
    - name: G_CLOINNGCF_022845735_07575
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_01800
    - name: G_CLOINNGCF_022845735_01800
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_23925
    - name: G_CLOINNGCF_022845735_23925
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_09510
    - name: G_CLOINNGCF_022845735_09510
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_00680
    - name: G_CLOINNGCF_022845735_00680
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_03495
    - name: G_CLOINNGCF_022845735_03495
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_04335
    - name: G_CLOINNGCF_022845735_04335
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_21790
    - name: G_CLOINNGCF_022845735_21790
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_24250
    - name: G_CLOINNGCF_022845735_24250
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_00895
    - name: G_CLOINNGCF_022845735_00895
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_21185
    - name: G_CLOINNGCF_022845735_21185
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_21180
    - name: G_CLOINNGCF_022845735_21180
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_13080
    - name: G_CLOINNGCF_022845735_13080
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_00975
    - name: G_CLOINNGCF_022845735_00975
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_14465
    - name: G_CLOINNGCF_022845735_14465
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_14830
    - name: G_CLOINNGCF_022845735_14830
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_15705
    - name: G_CLOINNGCF_022845735_15705
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_12300
    - name: G_CLOINNGCF_022845735_12300
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_14825
    - name: G_CLOINNGCF_022845735_14825
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_15700
    - name: G_CLOINNGCF_022845735_15700
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_12185
    - name: G_CLOINNGCF_022845735_12185
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_22120
    - name: G_CLOINNGCF_022845735_22120
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_22585
    - name: G_CLOINNGCF_022845735_22585
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06810
    - name: G_CLOINNGCF_022845735_06810
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_15500
    - name: G_CLOINNGCF_022845735_15500
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_12175
    - name: G_CLOINNGCF_022845735_12175
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02370
    - name: G_CLOINNGCF_022845735_02370
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06270
    - name: G_CLOINNGCF_022845735_06270
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_01535
    - name: G_CLOINNGCF_022845735_01535
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_09575
    - name: G_CLOINNGCF_022845735_09575
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_03205
    - name: G_CLOINNGCF_022845735_03205
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02655
    - name: G_CLOINNGCF_022845735_02655
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_05885
    - name: G_CLOINNGCF_022845735_05885
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_10990
    - name: G_CLOINNGCF_022845735_10990
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02960
    - name: G_CLOINNGCF_022845735_02960
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02510
    - name: G_CLOINNGCF_022845735_02510
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_13710
    - name: G_CLOINNGCF_022845735_13710
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_24945
    - name: G_CLOINNGCF_022845735_24945
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06220
    - name: G_CLOINNGCF_022845735_06220
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06215
    - name: G_CLOINNGCF_022845735_06215
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_01290
    - name: G_CLOINNGCF_022845735_01290
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_04540
    - name: G_CLOINNGCF_022845735_04540
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_01285
    - name: G_CLOINNGCF_022845735_01285
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_23320
    - name: G_CLOINNGCF_022845735_23320
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_13100
    - name: G_CLOINNGCF_022845735_13100
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_11305
    - name: G_CLOINNGCF_022845735_11305
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_12625
    - name: G_CLOINNGCF_022845735_12625
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_12380
    - name: G_CLOINNGCF_022845735_12380
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_02460
    - name: G_CLOINNGCF_022845735_02460
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_04230
    - name: G_CLOINNGCF_022845735_04230
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_10585
    - name: G_CLOINNGCF_022845735_10585
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_06285
    - name: G_CLOINNGCF_022845735_06285
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_08155
    - name: G_CLOINNGCF_022845735_08155
    - annotation: !!omap
      - sbo: SBO:0000243
  - !!omap
    - id: CLOINNGCF_022845735_08975
    - name: G_CLOINNGCF_022845735_08975
    - annotation: !!omap
      - sbo: SBO:0000243
- id: iPKB_GCF_022845735_1
- compartments: !!omap
  - C_c: cytosol
  - C_e: extracellular space
  - C_p: periplasm
- annotation: !!omap
  - Description: This model was built with CarveMe version 1.6.4
- version: '1.2'
